RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 TFCP2Q12800 502 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 HHIPL2Q6UWX4 724 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 ATF7IPQ6VMQ6 1270 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 MIGA2Q7L4E1 593 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 ZKSCAN4Q969J2 545 aaPredicted RBP10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 MRIQ9BWK5 157 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 FAM198AQ9UFP1 575 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 SUGT1Q9Y2Z0 365 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 DAGLAQ9Y4D2 1042 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 CENPFP49454 3210 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 MAST3O60307 1309 aa10.07□□□□□ -0.8
AC012494.1-201ENST00000439259 OTOFQ9HC10 1997 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 PNMA6EA0A0J9YXQ4 647 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 UNCXA6NJT0 531 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 GNAI3P08754 354 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 INHBEP58166 350 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 CAP1Q01518 475 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 NFIAQ12857 509 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 CRHR2Q13324 411 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 RASGRF1Q13972 1273 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 CCDC102BQ68D86 513 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 CDC42EP5Q6NZY7 148 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 ZFPM1Q8IX07 1006 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 TMOD2Q9NZR1 351 aa10.06□□□□□ -0.8
AC012494.1-201ENST00000439259 A0A1B0GUL7 405 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 IPO8O15397 1037 aaKnown RBP10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 ALDH1A1P00352 501 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 LDHBP07195 334 aaKnown RBP10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 SLURP2P0DP57 97 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 NOM1Q5C9Z4 860 aaKnown RBP10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 FAM83AQ86UY5 434 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 TMEM57Q8N5G2 664 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 TTC13Q8NBP0 860 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 BRI3BPQ8WY22 251 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 XAGE2Q96GT9 111 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 WRNIP1Q96S55 665 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 USP40Q9NVE5 1235 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 GNL3LQ9NVN8 582 aaKnown RBP10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 DENND2AQ9ULE3 1009 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 CSADQ9Y600 493 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 SNCAIPQ9Y6H5 919 aa10.05□□□□□ -0.8
AC012494.1-201ENST00000439259 CCL15-CCL14A0A0B4J2E2 113 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 GNAI2P04899 355 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 INPP5BP32019 993 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 MTX1Q13505 466 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 PKN2Q16513 984 aaKnown RBP10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 CCL15Q16663 113 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 FKBP1CQ5VVH2 108 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 FAM43AQ8N2R8 423 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 CD99L2Q8TCZ2 262 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 C1orf115Q9H7X2 142 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 ABCF2Q9UG63 623 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 TRIM17Q9Y577 477 aa10.04□□□□□ -0.8
AC012494.1-201ENST00000439259 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 SMAPO00193 183 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 IRF6O14896 467 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 SEMA3EO15041 775 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 CENPBP07199 599 aaPredicted RBP10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 GTF2A2P52657 109 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 ZKSCAN2Q63HK3 967 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 OTUD7BQ6GQQ9 843 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 FBXO46Q6PJ61 603 aaPredicted RBP10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 NUDT18Q6ZVK8 323 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 OTOP1Q7RTM1 612 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 KCNV2Q8TDN2 545 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 FAM151AQ8WW52 585 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 MYH13Q9UKX3 1938 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 SALL1Q9NSC2 1324 aa10.03□□□□□ -0.8
AC012494.1-201ENST00000439259 RLBP1P12271 317 aa10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 TAF1CQ15572 869 aaPredicted RBP10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 DCAF15Q66K64 600 aa10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 TBC1D9Q6ZT07 1266 aa10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 ERO1BQ86YB8 467 aa10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 DZIP1Q86YF9 867 aaKnown RBP10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 ZNF384Q8TF68 577 aa10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 ZNF341Q9BYN7 854 aa10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 IRX2Q9BZI1 471 aaPredicted RBP10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 DDX4Q9NQI0 724 aaKnown RBP10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 HMG20BQ9P0W2 317 aa10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 AKAP2Q9Y2D5 859 aa10.02□□□□□ -0.81
AC012494.1-201ENST00000439259 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 MKI67P46013 3256 aaKnown RBP10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 BRCA2P51587 3418 aa10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 BTBD19C9JJ37 291 aa10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 BTDP43251 543 aa10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 RGS3P49796 1198 aa10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 SP3Q02447 781 aa10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 MECOMQ03112 1051 aa10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 G3BP1Q13283 466 aaKnown RBP eCLIP10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 PICALMQ13492 652 aa10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 MVPQ14764 893 aaKnown RBP10.01□□□□□ -0.81
AC012494.1-201ENST00000439259 PADI6Q6TGC4 694 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms