RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CERS3Q8IU89 383 aa13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 CCDC94Q9BW85 323 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 ARPP21Q9UBL0 812 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 PYCARDQ9ULZ3 195 aa13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 MINPP1Q9UNW1 487 aa13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 KCNJ14Q9UNX9 436 aa13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 TTF2Q9UNY4 1162 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 FAM160A1Q05DH4 1040 aa13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 CUL5Q93034 780 aa13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 RRP36Q96EU6 259 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-202ENST00000438773 CAMTA2O94983 1202 aa13.21□□□□□ -0.3
TRAPPC9-202ENST00000438773 CSF1RP07333 972 aa13.21□□□□□ -0.3
TRAPPC9-202ENST00000438773 TNNT1P13805 278 aa13.21□□□□□ -0.3
TRAPPC9-202ENST00000438773 RILPL1Q5EBL4 403 aa13.21□□□□□ -0.3
TRAPPC9-202ENST00000438773 KRI1Q8N9T8 703 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 STRBPQ96SI9 672 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 BBOX1O75936 387 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 PARP1P09874 1014 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 PPP2R5BQ15173 497 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 RBM26Q5T8P6 1007 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 DHX58Q96C10 678 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 IDEP14735 1019 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 MCM7P33993 719 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 APOA5Q6Q788 366 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 MON2Q7Z3U7 1717 aa13.2□□□□□ -0.3
TRAPPC9-202ENST00000438773 TCP10Q12799 353 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 MED23Q9ULK4 1368 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 GRAPQ13588 217 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 MYSM1Q5VVJ2 828 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 GRAPLQ8TC17 118 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 HSP90AA4PQ58FG1 418 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 TICAM2Q86XR7 235 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 C2CD5Q86YS7 1000 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 AOPEPQ8N6M6 819 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 KCNF1Q9H3M0 494 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 NAP1L1P55209 391 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 ZNF174Q15697 407 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 SMAP1Q8IYB5 467 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 LARGE2Q8N3Y3 721 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 ZSCAN10Q96SZ4 725 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
TRAPPC9-202ENST00000438773 GNA11P29992 359 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 FBXO18Q8NFZ0 1043 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 TTC14Q96N46 770 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 ARGLU1Q9NWB6 273 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 ZNHIT6Q9NWK9 470 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 ZMYM6O95789 1325 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 TOP1P11387 765 aaKnown RBP13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 SCNN1DP51172 638 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 COL9A3Q14050 684 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 GPR101Q96P66 508 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 ZSWIM5Q9P217 1185 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 BTDP43251 543 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 KIAA0825Q8IV33 1275 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 USP40Q9NVE5 1235 aa13.18□□□□□ -0.3
TRAPPC9-202ENST00000438773 TNNI2P48788 182 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 TOB2Q14106 344 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 CCP110O43303 1012 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 LIG1P18858 919 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 TEKT1Q969V4 418 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 CEP89Q96ST8 783 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 ZSWIM4Q9H7M6 989 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 CYP2D7A0A087X1C5 515 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 VWA3AA6NCI4 1184 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 MMP10P09238 476 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 STAT6P42226 847 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 NFIXQ14938 502 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 TMC6Q7Z403 805 aa13.17□□□□□ -0.3
TRAPPC9-202ENST00000438773 RIOK3O14730 519 aaKnown RBP13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 PPEF1O14829 653 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 GPS2Q13227 327 aa13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 SPECC1Q5M775 1068 aa13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 ADRA2BP18089 450 aa13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 PRDX5P30044 214 aa13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 MECOMQ03112 1051 aa13.16□□□□□ -0.3
TRAPPC9-202ENST00000438773 CLSTN2Q9H4D0 955 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms