RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 PCDH11YQ9BZA8 1340 aa12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 A6NNZ2 444 aa12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 HPDP32754 393 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 ADCK5Q3MIX3 580 aa12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 TUBB8Q3ZCM7 444 aa12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 DCAF17Q5H9S7 520 aaPredicted RBP12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 CCDC25Q86WR0 208 aa12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 C19orf44Q9H6X5 657 aa12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 KDM5AP29375 1690 aaKnown RBP12.53□□□□□ -0.4
SEMA4D-211ENST00000438547 CTDSPL2Q05D32 466 aa12.52□□□□□ -0.4
SEMA4D-211ENST00000438547 TPTE2Q6XPS3 522 aa12.52□□□□□ -0.4
SEMA4D-211ENST00000438547 MAP4K1Q92918 833 aa12.52□□□□□ -0.4
SEMA4D-211ENST00000438547 PCDHA7Q9UN72 937 aa12.52□□□□□ -0.4
SEMA4D-211ENST00000438547 SAMD9Q5K651 1589 aa12.52□□□□□ -0.4
SEMA4D-211ENST00000438547 SH3TC1Q8TE82 1336 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 PLXNC1O60486 1568 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 GOLGA6BA6NDN3 693 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 CMA1P23946 247 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 CALCOCO2Q13137 446 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 VWA3BQ502W6 1294 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 IFT20Q8IY31 132 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 JAG2Q9Y219 1238 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 RNASE9P60153 205 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 ST5P78524 1137 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 BRD3Q15059 726 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 GSTA5Q7RTV2 222 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 TDRD7Q8NHU6 1098 aaKnown RBP12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 NOX5Q96PH1 765 aa12.52□□□□□ -0.41
SEMA4D-211ENST00000438547 GIGYF1O75420 1035 aaPredicted RBP12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 RBM6P78332 1123 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 MTUS1Q9ULD2 1270 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 ATP6V0A2Q9Y487 856 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 KCNQ3O43525 872 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 PDE8AO60658 829 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 ZBTB16Q05516 673 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 NELFBQ8WX92 580 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 CCDC51Q96ER9 411 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 NYXQ9GZU5 481 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 INPP5BP32019 993 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 GJC1P36383 396 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 MRPL12P52815 198 aaKnown RBP12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 PLCB3Q01970 1234 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 LPIN2Q92539 896 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 KCNK9Q9NPC2 374 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 DESI2Q9BSY9 194 aa12.51□□□□□ -0.41
SEMA4D-211ENST00000438547 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 SLC9C1Q4G0N8 1177 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 WDR78Q5VTH9 848 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 GBP6Q6ZN66 633 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 SND1Q7KZF4 910 aaKnown RBP eCLIP12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 FMNL3Q8IVF7 1028 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 SIRT2Q8IXJ6 389 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 PPP2R2CQ9Y2T4 447 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 ADD1P35611 737 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 TXKP42681 527 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 PPP1R7Q15435 360 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 DDB1Q16531 1140 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 SYNCQ9H7C4 482 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 ERVK-7P63135 1459 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 EFCAB8A8MWE9 144 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 ZSCAN26Q16670 478 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 KIAA1524Q8TCG1 905 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 RABEP2Q9H5N1 569 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 FANCLQ9NW38 375 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 CETN3O15182 167 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 CCDC50Q8IVM0 306 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 PSMB7Q99436 277 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 VPS54Q9P1Q0 977 aa12.5□□□□□ -0.41
SEMA4D-211ENST00000438547 hCG_1642624A0A1W2PR95 340 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 CCNT1O60563 726 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 NDUFA8P51970 172 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 ZNF622Q969S3 477 aaKnown RBP eCLIP12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 LRRC45Q96CN5 670 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 NAP1L3Q99457 506 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 NAP1L4Q99733 375 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 HAUS7Q99871 368 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 BLZF1Q9H2G9 400 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 MKRN1Q9UHC7 482 aaKnown RBP12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 SAR1BQ9Y6B6 198 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 KDM6BO15054 1643 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 TAF5LO75529 589 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 MXRA7P84157 204 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 FERMT1Q9BQL6 677 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 CCDC84Q86UT8 332 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
SEMA4D-211ENST00000438547 OR8K1Q8NGG5 319 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms