RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 XAGE2Q96GT9 111 aa22.69■■□□□ 1.22
UBXN1-203ENST00000436354 PAWRQ96IZ0 340 aaKnown RBP22.69■■□□□ 1.22
UBXN1-203ENST00000436354 TBC1D2Q9BYX2 928 aa22.69■■□□□ 1.22
UBXN1-203ENST00000436354 API5Q9BZZ5 524 aaKnown RBP22.69■■□□□ 1.22
UBXN1-203ENST00000436354 NOB1Q9ULX3 412 aaKnown RBP22.69■■□□□ 1.22
UBXN1-203ENST00000436354 A0A1B0GUL7 405 aa22.68■■□□□ 1.22
UBXN1-203ENST00000436354 LDHCP07864 332 aa22.68■■□□□ 1.22
UBXN1-203ENST00000436354 SPP2Q13103 211 aa22.68■■□□□ 1.22
UBXN1-203ENST00000436354 ZNF280CQ8ND82 737 aa22.68■■□□□ 1.22
UBXN1-203ENST00000436354 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.68■■□□□ 1.22
UBXN1-203ENST00000436354 LOC285556D6RIA3 1793 aa22.68■■□□□ 1.22
UBXN1-203ENST00000436354 GSTO1P78417 241 aa22.67■■□□□ 1.22
UBXN1-203ENST00000436354 COL2A1P02458 1487 aaPredicted RBP22.66■■□□□ 1.22
UBXN1-203ENST00000436354 FAM196BA6NMK8 535 aa22.66■■□□□ 1.22
UBXN1-203ENST00000436354 HMGCRP04035 888 aa22.66■■□□□ 1.22
UBXN1-203ENST00000436354 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
UBXN1-203ENST00000436354 TFCP2Q12800 502 aa22.66■■□□□ 1.22
UBXN1-203ENST00000436354 ANKLE1Q8NAG6 615 aa22.66■■□□□ 1.22
UBXN1-203ENST00000436354 CDCA7LQ96GN5 454 aa22.66■■□□□ 1.22
UBXN1-203ENST00000436354 MEIS3Q99687 375 aa22.66■■□□□ 1.22
UBXN1-203ENST00000436354 STAP2Q9UGK3 403 aa22.66■■□□□ 1.22
UBXN1-203ENST00000436354 ATAD5Q96QE3 1844 aa22.66■■□□□ 1.22
UBXN1-203ENST00000436354 SLC17A8Q8NDX2 589 aa22.65■■□□□ 1.22
UBXN1-203ENST00000436354 ZNF384Q8TF68 577 aa22.65■■□□□ 1.22
UBXN1-203ENST00000436354 ALPK3Q96L96 1907 aa22.65■■□□□ 1.22
UBXN1-203ENST00000436354 SRGAP3O43295 1099 aa22.64■■□□□ 1.21
UBXN1-203ENST00000436354 CAP2P40123 477 aa22.64■■□□□ 1.21
UBXN1-203ENST00000436354 HMGCS2P54868 508 aa22.64■■□□□ 1.21
UBXN1-203ENST00000436354 NSUN4Q96CB9 384 aaKnown RBP22.64■■□□□ 1.21
UBXN1-203ENST00000436354 NEUROD6Q96NK8 337 aa22.64■■□□□ 1.21
UBXN1-203ENST00000436354 HMX1Q9NP08 348 aaPredicted RBP22.64■■□□□ 1.21
UBXN1-203ENST00000436354 HMG20BQ9P0W2 317 aa22.64■■□□□ 1.21
UBXN1-203ENST00000436354 RPTORQ8N122 1335 aa22.63■■□□□ 1.21
UBXN1-203ENST00000436354 USP17L5A8MUK1 530 aa22.63■■□□□ 1.21
UBXN1-203ENST00000436354 SOX1O00570 391 aaPredicted RBP22.63■■□□□ 1.21
UBXN1-203ENST00000436354 GORABQ5T7V8 394 aa22.63■■□□□ 1.21
UBXN1-203ENST00000436354 TRMT2AQ8IZ69 625 aaKnown RBP22.63■■□□□ 1.21
UBXN1-203ENST00000436354 SPATA5Q8NB90 893 aa22.63■■□□□ 1.21
UBXN1-203ENST00000436354 DIS3LQ8TF46 1054 aaKnown RBP22.63■■□□□ 1.21
UBXN1-203ENST00000436354 ASCC2Q9H1I8 757 aaPredicted RBP22.63■■□□□ 1.21
UBXN1-203ENST00000436354 AS3MTQ9HBK9 375 aa22.63■■□□□ 1.21
UBXN1-203ENST00000436354 HERC5Q9UII4 1024 aaKnown RBP22.63■■□□□ 1.21
UBXN1-203ENST00000436354 GJD2Q9UKL4 321 aa22.63■■□□□ 1.21
UBXN1-203ENST00000436354 GNAI3P08754 354 aa22.62■■□□□ 1.21
UBXN1-203ENST00000436354 SH3D19Q5HYK7 790 aa22.62■■□□□ 1.21
UBXN1-203ENST00000436354 LRCH3Q96II8 777 aa22.62■■□□□ 1.21
UBXN1-203ENST00000436354 NBPF3Q9H094 633 aa22.62■■□□□ 1.21
UBXN1-203ENST00000436354 RAI14Q9P0K7 980 aa22.62■■□□□ 1.21
UBXN1-203ENST00000436354 BMP8BP34820 402 aa22.61■■□□□ 1.21
UBXN1-203ENST00000436354 MTX1Q13505 466 aa22.61■■□□□ 1.21
UBXN1-203ENST00000436354 TBC1D9Q6ZT07 1266 aa22.61■■□□□ 1.21
UBXN1-203ENST00000436354 GDF15Q99988 308 aa22.61■■□□□ 1.21
UBXN1-203ENST00000436354 PI16Q6UXB8 463 aa22.6■■□□□ 1.21
UBXN1-203ENST00000436354 TEX11Q8IYF3 940 aa22.6■■□□□ 1.21
UBXN1-203ENST00000436354 C7orf61Q8IZ16 206 aa22.6■■□□□ 1.21
UBXN1-203ENST00000436354 NOL10Q9BSC4 688 aaKnown RBP22.6■■□□□ 1.21
UBXN1-203ENST00000436354 MORF4L1Q9UBU8 362 aa22.6■■□□□ 1.21
UBXN1-203ENST00000436354 DLL1O00548 723 aa22.59■■□□□ 1.21
UBXN1-203ENST00000436354 ARID4AP29374 1257 aaPredicted RBP22.59■■□□□ 1.21
UBXN1-203ENST00000436354 RRP1BQ14684 758 aaKnown RBP22.59■■□□□ 1.21
UBXN1-203ENST00000436354 WDR18Q9BV38 432 aa22.59■■□□□ 1.21
UBXN1-203ENST00000436354 PI4KBQ9UBF8 816 aa22.59■■□□□ 1.21
UBXN1-203ENST00000436354 IRX3P78415 501 aaPredicted RBP22.58■■□□□ 1.21
UBXN1-203ENST00000436354 TRIM32Q13049 653 aa22.58■■□□□ 1.21
UBXN1-203ENST00000436354 DHX36Q9H2U1 1008 aaKnown RBP22.58■■□□□ 1.21
UBXN1-203ENST00000436354 C11orf49Q9H6J7 331 aa22.58■■□□□ 1.21
UBXN1-203ENST00000436354 LRP2BPQ9P2M1 347 aa22.58■■□□□ 1.21
UBXN1-203ENST00000436354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.58■■□□□ 1.21
UBXN1-203ENST00000436354 DDX60LQ5H9U9 1706 aaKnown RBP22.57■■□□□ 1.2
UBXN1-203ENST00000436354 PLXNB2O15031 1838 aa22.57■■□□□ 1.2
UBXN1-203ENST00000436354 ASNSP08243 561 aa22.57■■□□□ 1.2
UBXN1-203ENST00000436354 BACE1P56817 501 aa22.57■■□□□ 1.2
UBXN1-203ENST00000436354 GPR153Q6NV75 609 aa22.57■■□□□ 1.2
UBXN1-203ENST00000436354 ARHGAP45Q92619 1136 aa22.57■■□□□ 1.2
UBXN1-203ENST00000436354 TMOD4Q9NZQ9 345 aa22.57■■□□□ 1.2
UBXN1-203ENST00000436354 OGDHLQ9ULD0 1010 aa22.57■■□□□ 1.2
UBXN1-203ENST00000436354 ZMYND8Q9ULU4 1186 aaPredicted RBP22.57■■□□□ 1.2
UBXN1-203ENST00000436354 UQCRFS1P1P0C7P4 283 aa22.56■■□□□ 1.2
UBXN1-203ENST00000436354 HOXA7P31268 230 aaPredicted RBP22.56■■□□□ 1.2
UBXN1-203ENST00000436354 MTMR2Q13614 643 aa22.56■■□□□ 1.2
UBXN1-203ENST00000436354 SH3RF3Q8TEJ3 882 aaPredicted RBP22.56■■□□□ 1.2
UBXN1-203ENST00000436354 TRIB2Q92519 343 aa22.56■■□□□ 1.2
UBXN1-203ENST00000436354 BAG3O95817 575 aa22.55■■□□□ 1.2
UBXN1-203ENST00000436354 XRCC5P13010 732 aaKnown RBP22.55■■□□□ 1.2
UBXN1-203ENST00000436354 PLCG2P16885 1265 aa22.55■■□□□ 1.2
UBXN1-203ENST00000436354 CYP2B6P20813 491 aa22.55■■□□□ 1.2
UBXN1-203ENST00000436354 MCAMP43121 646 aa22.55■■□□□ 1.2
UBXN1-203ENST00000436354 MNX1P50219 401 aaPredicted RBP22.55■■□□□ 1.2
UBXN1-203ENST00000436354 MAP3K21Q5TCX8 1036 aa22.55■■□□□ 1.2
UBXN1-203ENST00000436354 GPRC5AQ8NFJ5 357 aa22.55■■□□□ 1.2
UBXN1-203ENST00000436354 SOCS4Q8WXH5 440 aa22.55■■□□□ 1.2
UBXN1-203ENST00000436354 YTHDC1Q96MU7 727 aaKnown RBP22.55■■□□□ 1.2
UBXN1-203ENST00000436354 NUDT12Q9BQG2 462 aa22.55■■□□□ 1.2
UBXN1-203ENST00000436354 C19orf81C9J6K1 198 aa22.54■■□□□ 1.2
UBXN1-203ENST00000436354 G3BP1Q13283 466 aaKnown RBP eCLIP22.54■■□□□ 1.2
UBXN1-203ENST00000436354 TRMT44Q8IYL2 757 aaKnown RBP22.54■■□□□ 1.2
UBXN1-203ENST00000436354 P2RX7Q99572 595 aaKnown RBP22.54■■□□□ 1.2
UBXN1-203ENST00000436354 GINM1Q9NU53 330 aa22.54■■□□□ 1.2
UBXN1-203ENST00000436354 SIPA1L1O43166 1804 aa22.54■■□□□ 1.2
UBXN1-203ENST00000436354 PRKAR2AP13861 404 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms