RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 PCDHB15Q9Y5E8 787 aa22.24■■□□□ 1.15
HMGN1-207ENST00000436324 COL2A1P02458 1487 aaPredicted RBP22.23■■□□□ 1.15
HMGN1-207ENST00000436324 CXCL11O14625 94 aa22.23■■□□□ 1.15
HMGN1-207ENST00000436324 PDE6AP16499 860 aa22.23■■□□□ 1.15
HMGN1-207ENST00000436324 ATP5JP18859 108 aa22.23■■□□□ 1.15
HMGN1-207ENST00000436324 PKN2Q16513 984 aaKnown RBP22.23■■□□□ 1.15
HMGN1-207ENST00000436324 ERO1AQ96HE7 468 aa22.23■■□□□ 1.15
HMGN1-207ENST00000436324 DCTPP1Q9H773 170 aa22.23■■□□□ 1.15
HMGN1-207ENST00000436324 PDHXO00330 501 aa22.22■■□□□ 1.15
HMGN1-207ENST00000436324 RRP1BQ14684 758 aaKnown RBP22.22■■□□□ 1.15
HMGN1-207ENST00000436324 ANKRD23Q86SG2 305 aa22.22■■□□□ 1.15
HMGN1-207ENST00000436324 CRACR2BQ8N4Y2 399 aaPredicted RBP22.22■■□□□ 1.15
HMGN1-207ENST00000436324 TRIM34Q9BYJ4 488 aa22.22■■□□□ 1.15
HMGN1-207ENST00000436324 PAG1Q9NWQ8 432 aa22.22■■□□□ 1.15
HMGN1-207ENST00000436324 HPS5Q9UPZ3 1129 aa22.22■■□□□ 1.15
HMGN1-207ENST00000436324 AFG3L2Q9Y4W6 797 aa22.22■■□□□ 1.15
HMGN1-207ENST00000436324 MAGEB6P1A0A0J9YX57 407 aa22.21■■□□□ 1.15
HMGN1-207ENST00000436324 TRIM75PA6NK02 468 aa22.21■■□□□ 1.15
HMGN1-207ENST00000436324 MOGSQ13724 837 aa22.21■■□□□ 1.15
HMGN1-207ENST00000436324 GADL1Q6ZQY3 521 aa22.21■■□□□ 1.15
HMGN1-207ENST00000436324 OTOP1Q7RTM1 612 aa22.21■■□□□ 1.15
HMGN1-207ENST00000436324 ZCCHC17Q9NP64 241 aaKnown RBP22.21■■□□□ 1.15
HMGN1-207ENST00000436324 HERC5Q9UII4 1024 aaKnown RBP22.21■■□□□ 1.15
HMGN1-207ENST00000436324 ZNF532Q9HCE3 1301 aa22.21■■□□□ 1.15
HMGN1-207ENST00000436324 ECM2O94769 699 aaPredicted RBP22.2■■□□□ 1.14
HMGN1-207ENST00000436324 CAP1Q01518 475 aa22.2■■□□□ 1.14
HMGN1-207ENST00000436324 FBXO46Q6PJ61 603 aaPredicted RBP22.2■■□□□ 1.14
HMGN1-207ENST00000436324 HAUS7Q99871 368 aa22.2■■□□□ 1.14
HMGN1-207ENST00000436324 A0A0G2JLL6 359 aaPredicted RBP22.19■■□□□ 1.14
HMGN1-207ENST00000436324 TLR2O60603 784 aa22.19■■□□□ 1.14
HMGN1-207ENST00000436324 HLA-DOAP06340 250 aa22.19■■□□□ 1.14
HMGN1-207ENST00000436324 CAP2P40123 477 aa22.19■■□□□ 1.14
HMGN1-207ENST00000436324 SLFNL1Q499Z3 407 aa22.19■■□□□ 1.14
HMGN1-207ENST00000436324 GPAT2Q6NUI2 795 aa22.19■■□□□ 1.14
HMGN1-207ENST00000436324 PRRT2Q7Z6L0 340 aaPredicted RBP22.19■■□□□ 1.14
HMGN1-207ENST00000436324 CERS3Q8IU89 383 aa22.19■■□□□ 1.14
HMGN1-207ENST00000436324 FOXP4Q8IVH2 680 aaPredicted RBP22.19■■□□□ 1.14
HMGN1-207ENST00000436324 RIOK1Q9BRS2 568 aaKnown RBP22.19■■□□□ 1.14
HMGN1-207ENST00000436324 EFCC1Q9HA90 598 aa22.19■■□□□ 1.14
HMGN1-207ENST00000436324 CPA4Q9UI42 421 aa22.19■■□□□ 1.14
HMGN1-207ENST00000436324 TMED8Q6PL24 325 aaPredicted RBP22.18■■□□□ 1.14
HMGN1-207ENST00000436324 FASTKD5Q7L8L6 764 aaKnown RBP22.18■■□□□ 1.14
HMGN1-207ENST00000436324 DNAJC18Q9H819 358 aa22.18■■□□□ 1.14
HMGN1-207ENST00000436324 TCRBV5S4A2TA0A5A2 114 aa22.17■■□□□ 1.14
HMGN1-207ENST00000436324 SPP2Q13103 211 aa22.17■■□□□ 1.14
HMGN1-207ENST00000436324 TSHZ3Q63HK5 1081 aa22.17■■□□□ 1.14
HMGN1-207ENST00000436324 ECHDC1Q9NTX5 307 aa22.17■■□□□ 1.14
HMGN1-207ENST00000436324 DOCK1Q14185 1865 aa22.16■■□□□ 1.14
HMGN1-207ENST00000436324 GDF11O95390 407 aa22.16■■□□□ 1.14
HMGN1-207ENST00000436324 CHGBP05060 677 aa22.16■■□□□ 1.14
HMGN1-207ENST00000436324 CYP2C8P10632 490 aa22.16■■□□□ 1.14
HMGN1-207ENST00000436324 SOX10P56693 466 aa22.16■■□□□ 1.14
HMGN1-207ENST00000436324 JAG1P78504 1218 aa22.16■■□□□ 1.14
HMGN1-207ENST00000436324 SHROOM1Q2M3G4 852 aaPredicted RBP22.16■■□□□ 1.14
HMGN1-207ENST00000436324 CRNKL1Q9BZJ0 848 aaKnown RBP22.16■■□□□ 1.14
HMGN1-207ENST00000436324 USP17L5A8MUK1 530 aa22.15■■□□□ 1.14
HMGN1-207ENST00000436324 ADD2P35612 726 aa22.15■■□□□ 1.14
HMGN1-207ENST00000436324 METTL16Q86W50 562 aaKnown RBP22.15■■□□□ 1.14
HMGN1-207ENST00000436324 LCORLQ8N3X6 602 aa22.15■■□□□ 1.14
HMGN1-207ENST00000436324 ZNF280CQ8ND82 737 aa22.15■■□□□ 1.14
HMGN1-207ENST00000436324 ARHGAP39Q9C0H5 1083 aa22.15■■□□□ 1.14
HMGN1-207ENST00000436324 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.15■■□□□ 1.14
HMGN1-207ENST00000436324 ARMT1Q9H993 441 aa22.15■■□□□ 1.14
HMGN1-207ENST00000436324 CDK5RAP2Q96SN8 1893 aa22.14■■□□□ 1.13
HMGN1-207ENST00000436324 POLR3DP05423 398 aaPredicted RBP22.14■■□□□ 1.13
HMGN1-207ENST00000436324 KIF22Q14807 665 aa22.14■■□□□ 1.13
HMGN1-207ENST00000436324 C17orf99Q6UX52 265 aa22.14■■□□□ 1.13
HMGN1-207ENST00000436324 SDR42E1Q8WUS8 393 aa22.14■■□□□ 1.13
HMGN1-207ENST00000436324 GPATCH3Q96I76 525 aa22.14■■□□□ 1.13
HMGN1-207ENST00000436324 PARK7Q99497 189 aaKnown RBP22.14■■□□□ 1.13
HMGN1-207ENST00000436324 PTPN22Q9Y2R2 807 aa22.14■■□□□ 1.13
HMGN1-207ENST00000436324 SIPA1L1O43166 1804 aa22.13■■□□□ 1.13
HMGN1-207ENST00000436324 ARHGEF6Q15052 776 aa22.13■■□□□ 1.13
HMGN1-207ENST00000436324 TTC6Q86TZ1 520 aa22.13■■□□□ 1.13
HMGN1-207ENST00000436324 MBD4O95243 580 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 ASNSP08243 561 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 PLCD1P51178 756 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 HMGCS2P54868 508 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 LACTBP83111 547 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-207ENST00000436324 TREML2Q5T2D2 321 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 AS3MTQ9HBK9 375 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 MCM9Q9NXL9 1143 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 SERPINB13Q9UIV8 391 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 FOCADQ5VW36 1801 aa22.12■■□□□ 1.13
HMGN1-207ENST00000436324 ADGRA2Q96PE1 1338 aa22.11■■□□□ 1.13
HMGN1-207ENST00000436324 PRKAB2O43741 272 aa22.11■■□□□ 1.13
HMGN1-207ENST00000436324 OTUD7AQ8TE49 926 aaPredicted RBP22.11■■□□□ 1.13
HMGN1-207ENST00000436324 TBC1D2Q9BYX2 928 aa22.11■■□□□ 1.13
HMGN1-207ENST00000436324 ZBTB21Q9ULJ3 1066 aa22.11■■□□□ 1.13
HMGN1-207ENST00000436324 AGTPBP1Q9UPW5 1226 aa22.11■■□□□ 1.13
HMGN1-207ENST00000436324 GH2P01242 217 aa22.1■■□□□ 1.13
HMGN1-207ENST00000436324 EVX2Q03828 476 aa22.1■■□□□ 1.13
HMGN1-207ENST00000436324 DCP1AQ9NPI6 582 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-207ENST00000436324 PHIPQ8WWQ0 1821 aa22.1■■□□□ 1.13
HMGN1-207ENST00000436324 CYP2D6P10635 497 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 MTMR2Q13614 643 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 UBE3CQ15386 1083 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 ZSCAN25Q6NSZ9 544 aa22.09■■□□□ 1.13
HMGN1-207ENST00000436324 PROCA1Q8NCQ7 364 aaPredicted RBP22.09■■□□□ 1.13
HMGN1-207ENST00000436324 SMCR8Q8TEV9 937 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms