RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IRF6O14896 467 aa19.65■□□□□ 0.74
SMPD4-207ENST00000435455 HLA-DOAP06340 250 aa19.65■□□□□ 0.74
SMPD4-207ENST00000435455 CCL15Q16663 113 aa19.65■□□□□ 0.74
SMPD4-207ENST00000435455 NOM1Q5C9Z4 860 aaKnown RBP19.65■□□□□ 0.74
SMPD4-207ENST00000435455 BRI3BPQ8WY22 251 aa19.65■□□□□ 0.74
SMPD4-207ENST00000435455 GLRX3O76003 335 aaKnown RBP19.64■□□□□ 0.73
SMPD4-207ENST00000435455 TBC1D8O95759 1140 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 MX1P20591 662 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 UBE3CQ15386 1083 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 TSHZ3Q63HK5 1081 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 FOXP4Q8IVH2 680 aaPredicted RBP19.64■□□□□ 0.73
SMPD4-207ENST00000435455 KBTBD3Q8NAB2 608 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 TRIM34Q9BYJ4 488 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
SMPD4-207ENST00000435455 PALD1Q9ULE6 856 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 KCNH4Q9UQ05 1017 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 NAV1Q8NEY1 1877 aa19.64■□□□□ 0.73
SMPD4-207ENST00000435455 ATAD5Q96QE3 1844 aa19.63■□□□□ 0.73
SMPD4-207ENST00000435455 FAM196BA6NMK8 535 aa19.63■□□□□ 0.73
SMPD4-207ENST00000435455 SLURP2P0DP57 97 aa19.63■□□□□ 0.73
SMPD4-207ENST00000435455 LRRFIP1Q32MZ4 808 aaKnown RBP19.63■□□□□ 0.73
SMPD4-207ENST00000435455 METTL16Q86W50 562 aaKnown RBP19.63■□□□□ 0.73
SMPD4-207ENST00000435455 SMC5Q8IY18 1101 aa19.63■□□□□ 0.73
SMPD4-207ENST00000435455 CRACR2BQ8N4Y2 399 aaPredicted RBP19.63■□□□□ 0.73
SMPD4-207ENST00000435455 PTPN18Q99952 460 aa19.63■□□□□ 0.73
SMPD4-207ENST00000435455 PTPRAP18433 802 aa19.62■□□□□ 0.73
SMPD4-207ENST00000435455 PI4K2BQ8TCG2 481 aa19.62■□□□□ 0.73
SMPD4-207ENST00000435455 OTUD7AQ8TE49 926 aaPredicted RBP19.62■□□□□ 0.73
SMPD4-207ENST00000435455 ZCCHC17Q9NP64 241 aaKnown RBP19.62■□□□□ 0.73
SMPD4-207ENST00000435455 SALL3Q9BXA9 1300 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 PHIPQ8WWQ0 1821 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 GPR25O00155 361 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 CXCL11O14625 94 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 ZFYP08048 801 aaPredicted RBP19.61■□□□□ 0.73
SMPD4-207ENST00000435455 CAP2P40123 477 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 LCORLQ8N3X6 602 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 STAP2Q9UGK3 403 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 ZHX2Q9Y6X8 837 aa19.61■□□□□ 0.73
SMPD4-207ENST00000435455 DDX60LQ5H9U9 1706 aaKnown RBP19.61■□□□□ 0.73
SMPD4-207ENST00000435455 MBD4O95243 580 aa19.6■□□□□ 0.73
SMPD4-207ENST00000435455 EHD4Q9H223 541 aa19.6■□□□□ 0.73
SMPD4-207ENST00000435455 ARMT1Q9H993 441 aa19.6■□□□□ 0.73
SMPD4-207ENST00000435455 PTPRFP10586 1907 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 IGHDP01880 384 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 CRHR2Q13324 411 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 TAF1CQ15572 869 aaPredicted RBP19.59■□□□□ 0.73
SMPD4-207ENST00000435455 SLFNL1Q499Z3 407 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 TBC1D2Q9BYX2 928 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 R3HDMLQ9H3Y0 253 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 DNAJC18Q9H819 358 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 ATP8A2Q9NTI2 1148 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 GINM1Q9NU53 330 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 SERPINB13Q9UIV8 391 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 AFG3L2Q9Y4W6 797 aa19.59■□□□□ 0.73
SMPD4-207ENST00000435455 BTBD19C9JJ37 291 aa19.58■□□□□ 0.72
SMPD4-207ENST00000435455 RNF113AO15541 343 aaKnown RBP19.58■□□□□ 0.72
SMPD4-207ENST00000435455 FKTNO75072 461 aa19.58■□□□□ 0.72
SMPD4-207ENST00000435455 POLR3DP05423 398 aaPredicted RBP19.58■□□□□ 0.72
SMPD4-207ENST00000435455 IRX6P78412 446 aaPredicted RBP19.58■□□□□ 0.72
SMPD4-207ENST00000435455 SLC4A8Q2Y0W8 1093 aa19.58■□□□□ 0.72
SMPD4-207ENST00000435455 FAM43AQ8N2R8 423 aa19.58■□□□□ 0.72
SMPD4-207ENST00000435455 ZNF296Q8WUU4 475 aaPredicted RBP19.58■□□□□ 0.72
SMPD4-207ENST00000435455 LNPKQ9C0E8 428 aa19.58■□□□□ 0.72
SMPD4-207ENST00000435455 ZFYVE28Q9HCC9 887 aa19.58■□□□□ 0.72
SMPD4-207ENST00000435455 DCP1AQ9NPI6 582 aaPredicted RBP19.58■□□□□ 0.72
SMPD4-207ENST00000435455 MCM9Q9NXL9 1143 aa19.58■□□□□ 0.72
SMPD4-207ENST00000435455 A0A0G2JLL6 359 aaPredicted RBP19.57■□□□□ 0.72
SMPD4-207ENST00000435455 ASNSP08243 561 aa19.57■□□□□ 0.72
SMPD4-207ENST00000435455 PDE1AP54750 535 aa19.57■□□□□ 0.72
SMPD4-207ENST00000435455 B4GALNT3Q6L9W6 998 aa19.57■□□□□ 0.72
SMPD4-207ENST00000435455 FASTKD5Q7L8L6 764 aaKnown RBP19.57■□□□□ 0.72
SMPD4-207ENST00000435455 PRRT2Q7Z6L0 340 aaPredicted RBP19.57■□□□□ 0.72
SMPD4-207ENST00000435455 ANKRD23Q86SG2 305 aa19.57■□□□□ 0.72
SMPD4-207ENST00000435455 SDR42E1Q8WUS8 393 aa19.57■□□□□ 0.72
SMPD4-207ENST00000435455 APPBP2Q92624 585 aa19.57■□□□□ 0.72
SMPD4-207ENST00000435455 DDRGK1Q96HY6 314 aa19.57■□□□□ 0.72
SMPD4-207ENST00000435455 BAZ2AQ9UIF9 1905 aaKnown RBP19.57■□□□□ 0.72
SMPD4-207ENST00000435455 USP17L5A8MUK1 530 aa19.56■□□□□ 0.72
SMPD4-207ENST00000435455 CHGBP05060 677 aa19.56■□□□□ 0.72
SMPD4-207ENST00000435455 NUCB1Q02818 461 aa19.56■□□□□ 0.72
SMPD4-207ENST00000435455 RRP1BQ14684 758 aaKnown RBP19.56■□□□□ 0.72
SMPD4-207ENST00000435455 IFFO2Q5TF58 517 aa19.56■□□□□ 0.72
SMPD4-207ENST00000435455 CHD1LQ86WJ1 897 aa19.56■□□□□ 0.72
SMPD4-207ENST00000435455 FSD1Q9BTV5 496 aa19.56■□□□□ 0.72
SMPD4-207ENST00000435455 PUS7LQ9H0K6 701 aaKnown RBP19.56■□□□□ 0.72
SMPD4-207ENST00000435455 TAOK2Q9UL54 1235 aa19.56■□□□□ 0.72
SMPD4-207ENST00000435455 TRIM75PA6NK02 468 aa19.55■□□□□ 0.72
SMPD4-207ENST00000435455 DGKZQ13574 1117 aa19.55■□□□□ 0.72
SMPD4-207ENST00000435455 MOGSQ13724 837 aa19.55■□□□□ 0.72
SMPD4-207ENST00000435455 CTU1Q7Z7A3 348 aaKnown RBP19.55■□□□□ 0.72
SMPD4-207ENST00000435455 AMOTL1Q8IY63 956 aa19.55■□□□□ 0.72
SMPD4-207ENST00000435455 AS3MTQ9HBK9 375 aa19.55■□□□□ 0.72
SMPD4-207ENST00000435455 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.55■□□□□ 0.72
SMPD4-207ENST00000435455 SLC4A4Q9Y6R1 1079 aa19.55■□□□□ 0.72
SMPD4-207ENST00000435455 PRKAB2O43741 272 aa19.54■□□□□ 0.72
SMPD4-207ENST00000435455 PLCD1P51178 756 aa19.54■□□□□ 0.72
SMPD4-207ENST00000435455 TATDN1Q6P1N9 297 aa19.54■□□□□ 0.72
SMPD4-207ENST00000435455 GADL1Q6ZQY3 521 aa19.54■□□□□ 0.72
SMPD4-207ENST00000435455 CCDC84Q86UT8 332 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms