RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 PSMC4P43686 418 aa17.61■□□□□ 0.41
LINC01006-204ENST00000435354 NAA16Q6N069 864 aaPredicted RBP17.61■□□□□ 0.41
LINC01006-204ENST00000435354 GADL1Q6ZQY3 521 aa17.61■□□□□ 0.41
LINC01006-204ENST00000435354 SH3TC2Q8TF17 1288 aa17.61■□□□□ 0.41
LINC01006-204ENST00000435354 CCDC8Q9H0W5 538 aaPredicted RBP17.61■□□□□ 0.41
LINC01006-204ENST00000435354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.61■□□□□ 0.41
LINC01006-204ENST00000435354 AATFQ9NY61 560 aaKnown RBP eCLIP17.61■□□□□ 0.41
LINC01006-204ENST00000435354 MGAMO43451 1857 aa17.61■□□□□ 0.41
LINC01006-204ENST00000435354 TRIM75PA6NK02 468 aa17.6■□□□□ 0.41
LINC01006-204ENST00000435354 PPP4CP60510 307 aa17.6■□□□□ 0.41
LINC01006-204ENST00000435354 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
LINC01006-204ENST00000435354 SRRDQ9UH36 339 aa17.6■□□□□ 0.41
LINC01006-204ENST00000435354 SLC45A1Q9Y2W3 748 aa17.6■□□□□ 0.41
LINC01006-204ENST00000435354 LOC285556D6RIA3 1793 aa17.59■□□□□ 0.41
LINC01006-204ENST00000435354 OSBPP22059 807 aa17.59■□□□□ 0.41
LINC01006-204ENST00000435354 PRMT2P55345 433 aa17.59■□□□□ 0.41
LINC01006-204ENST00000435354 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
LINC01006-204ENST00000435354 EXOC6BQ9Y2D4 811 aa17.59■□□□□ 0.41
LINC01006-204ENST00000435354 BAG3O95817 575 aa17.58■□□□□ 0.4
LINC01006-204ENST00000435354 MYCP01106 439 aaPredicted RBP17.58■□□□□ 0.4
LINC01006-204ENST00000435354 CAP2P40123 477 aa17.58■□□□□ 0.4
LINC01006-204ENST00000435354 MAPKAPK5Q8IW41 473 aa17.58■□□□□ 0.4
LINC01006-204ENST00000435354 TMEM106CQ9BVX2 250 aa17.58■□□□□ 0.4
LINC01006-204ENST00000435354 FLT1P17948 1338 aa17.57■□□□□ 0.4
LINC01006-204ENST00000435354 FMNL1O95466 1100 aaPredicted RBP17.57■□□□□ 0.4
LINC01006-204ENST00000435354 PLCG2P16885 1265 aa17.57■□□□□ 0.4
LINC01006-204ENST00000435354 TREML2Q5T2D2 321 aa17.57■□□□□ 0.4
LINC01006-204ENST00000435354 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
LINC01006-204ENST00000435354 DNAJC18Q9H819 358 aa17.57■□□□□ 0.4
LINC01006-204ENST00000435354 PI4KBQ9UBF8 816 aa17.57■□□□□ 0.4
LINC01006-204ENST00000435354 HERC5Q9UII4 1024 aaKnown RBP17.57■□□□□ 0.4
LINC01006-204ENST00000435354 AGTPBP1Q9UPW5 1226 aa17.57■□□□□ 0.4
LINC01006-204ENST00000435354 NDUFB9Q9Y6M9 179 aa17.57■□□□□ 0.4
LINC01006-204ENST00000435354 MYPNQ86TC9 1320 aa17.56■□□□□ 0.4
LINC01006-204ENST00000435354 IGSF3O75054 1194 aa17.56■□□□□ 0.4
LINC01006-204ENST00000435354 DYNLL1P63167 89 aaKnown RBP17.56■□□□□ 0.4
LINC01006-204ENST00000435354 JAG1P78504 1218 aa17.56■□□□□ 0.4
LINC01006-204ENST00000435354 SPP2Q13103 211 aa17.56■□□□□ 0.4
LINC01006-204ENST00000435354 SLC4A8Q2Y0W8 1093 aa17.56■□□□□ 0.4
LINC01006-204ENST00000435354 AACSQ86V21 672 aa17.56■□□□□ 0.4
LINC01006-204ENST00000435354 DHX36Q9H2U1 1008 aaKnown RBP17.56■□□□□ 0.4
LINC01006-204ENST00000435354 IDH1O75874 414 aaKnown RBP17.55■□□□□ 0.4
LINC01006-204ENST00000435354 CYP7A1P22680 504 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 HOXD10P28358 340 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 FCGRTP55899 365 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 PRKCZQ05513 592 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 METTL16Q86W50 562 aaKnown RBP17.55■□□□□ 0.4
LINC01006-204ENST00000435354 ERC1Q8IUD2 1116 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 PROCA1Q8NCQ7 364 aaPredicted RBP17.55■□□□□ 0.4
LINC01006-204ENST00000435354 ZNF280CQ8ND82 737 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 ANTXR1Q9H6X2 564 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 PALD1Q9ULE6 856 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 DOCK3Q8IZD9 2030 aa17.55■□□□□ 0.4
LINC01006-204ENST00000435354 USP17L5A8MUK1 530 aa17.54■□□□□ 0.4
LINC01006-204ENST00000435354 HMGCS2P54868 508 aa17.54■□□□□ 0.4
LINC01006-204ENST00000435354 MTFR1Q15390 333 aa17.54■□□□□ 0.4
LINC01006-204ENST00000435354 SHROOM1Q2M3G4 852 aaPredicted RBP17.54■□□□□ 0.4
LINC01006-204ENST00000435354 SIRT2Q8IXJ6 389 aa17.54■□□□□ 0.4
LINC01006-204ENST00000435354 RAET1EQ8TD07 263 aa17.54■□□□□ 0.4
LINC01006-204ENST00000435354 SMCR8Q8TEV9 937 aaPredicted RBP17.54■□□□□ 0.4
LINC01006-204ENST00000435354 IL1RAPL2Q9NP60 686 aa17.54■□□□□ 0.4
LINC01006-204ENST00000435354 SAP30BPQ9UHR5 308 aaKnown RBP17.54■□□□□ 0.4
LINC01006-204ENST00000435354 GABRQQ9UN88 632 aa17.54■□□□□ 0.4
LINC01006-204ENST00000435354 MYH1P12882 1939 aa17.54■□□□□ 0.4
LINC01006-204ENST00000435354 GRK4P32298 578 aa17.53■□□□□ 0.4
LINC01006-204ENST00000435354 MIGA1Q8NAN2 632 aa17.53■□□□□ 0.4
LINC01006-204ENST00000435354 RHPN1Q8TCX5 695 aa17.53■□□□□ 0.4
LINC01006-204ENST00000435354 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
LINC01006-204ENST00000435354 ZBTB40Q9NUA8 1239 aa17.53■□□□□ 0.4
LINC01006-204ENST00000435354 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
LINC01006-204ENST00000435354 MS4A1P11836 297 aa17.52■□□□□ 0.4
LINC01006-204ENST00000435354 SH3D19Q5HYK7 790 aa17.52■□□□□ 0.4
LINC01006-204ENST00000435354 FOXP4Q8IVH2 680 aaPredicted RBP17.52■□□□□ 0.4
LINC01006-204ENST00000435354 ANKRD13CQ8N6S4 541 aa17.52■□□□□ 0.4
LINC01006-204ENST00000435354 MAGEB6Q8N7X4 407 aa17.52■□□□□ 0.4
LINC01006-204ENST00000435354 WDR18Q9BV38 432 aa17.52■□□□□ 0.4
LINC01006-204ENST00000435354 ASNSP08243 561 aa17.51■□□□□ 0.39
LINC01006-204ENST00000435354 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
LINC01006-204ENST00000435354 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
LINC01006-204ENST00000435354 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
LINC01006-204ENST00000435354 PNMA3Q9UL41 463 aa17.51■□□□□ 0.39
LINC01006-204ENST00000435354 DDX19BQ9UMR2 479 aa17.51■□□□□ 0.39
LINC01006-204ENST00000435354 DDX60LQ5H9U9 1706 aaKnown RBP17.5■□□□□ 0.39
LINC01006-204ENST00000435354 APBB1O00213 710 aa17.5■□□□□ 0.39
LINC01006-204ENST00000435354 FLT3LGP49771 235 aa17.5■□□□□ 0.39
LINC01006-204ENST00000435354 MAP3K12Q12852 859 aa17.5■□□□□ 0.39
LINC01006-204ENST00000435354 MTMR2Q13614 643 aa17.5■□□□□ 0.39
LINC01006-204ENST00000435354 FAM110CQ1W6H9 321 aa17.5■□□□□ 0.39
LINC01006-204ENST00000435354 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
LINC01006-204ENST00000435354 ASCC2Q9H1I8 757 aaPredicted RBP17.5■□□□□ 0.39
LINC01006-204ENST00000435354 AS3MTQ9HBK9 375 aa17.5■□□□□ 0.39
LINC01006-204ENST00000435354 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
LINC01006-204ENST00000435354 ZBTB21Q9ULJ3 1066 aa17.5■□□□□ 0.39
LINC01006-204ENST00000435354 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
LINC01006-204ENST00000435354 GDF11O95390 407 aa17.49■□□□□ 0.39
LINC01006-204ENST00000435354 HLA-DOAP06340 250 aa17.49■□□□□ 0.39
LINC01006-204ENST00000435354 CCL5P13501 91 aa17.49■□□□□ 0.39
LINC01006-204ENST00000435354 BACE1P56817 501 aa17.49■□□□□ 0.39
LINC01006-204ENST00000435354 SLAIN1Q8ND83 568 aa17.49■□□□□ 0.39
LINC01006-204ENST00000435354 KIF1BPQ96EK5 621 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms