RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 OSBPL5Q9H0X9 879 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP1-204ENST00000434728 ATAD5Q96QE3 1844 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 ZBTB22O15209 634 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 TBC1D12O60347 775 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 RARSP54136 660 aaKnown RBP16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 HMGCS2P54868 508 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 SPP2Q13103 211 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 IRF5Q13568 498 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 FAM110CQ1W6H9 321 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 TREML2Q5T2D2 321 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 TRMT2AQ8IZ69 625 aaKnown RBP16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 ZNF280CQ8ND82 737 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 RBM27Q9P2N5 1060 aaKnown RBP16.49■□□□□ 0.23
CDC42EP1-204ENST00000434728 GNAI2P04899 355 aa16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 GCLCP48506 637 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 RHBDL3P58872 404 aa16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 PI16Q6UXB8 463 aa16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 ARHGAP45Q92619 1136 aa16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 NSUN4Q96CB9 384 aaKnown RBP16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 AS3MTQ9HBK9 375 aa16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
CDC42EP1-204ENST00000434728 RANBP2P49792 3224 aaKnown RBP16.47■□□□□ 0.23
CDC42EP1-204ENST00000434728 USP17L5A8MUK1 530 aa16.47■□□□□ 0.23
CDC42EP1-204ENST00000434728 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
CDC42EP1-204ENST00000434728 UQCRFS1P1P0C7P4 283 aa16.47■□□□□ 0.23
CDC42EP1-204ENST00000434728 CAPN2P17655 700 aa16.47■□□□□ 0.23
CDC42EP1-204ENST00000434728 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
CDC42EP1-204ENST00000434728 MTX1Q13505 466 aa16.47■□□□□ 0.23
CDC42EP1-204ENST00000434728 BAG3O95817 575 aa16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 PLCG2P16885 1265 aa16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 CAP2P40123 477 aa16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 TTC39AQ5SRH9 613 aa16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 UBE2Q1Q7Z7E8 422 aa16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 CRACR2BQ8N4Y2 399 aaPredicted RBP16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 TMOD4Q9NZQ9 345 aa16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 HERC5Q9UII4 1024 aaKnown RBP16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 COL2A1P02458 1487 aaPredicted RBP16.46■□□□□ 0.23
CDC42EP1-204ENST00000434728 LOC285556D6RIA3 1793 aa16.46■□□□□ 0.22
CDC42EP1-204ENST00000434728 ZBTB7BO15156 539 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP1-204ENST00000434728 HMGCRP04035 888 aa16.45■□□□□ 0.22
CDC42EP1-204ENST00000434728 NAA16Q6N069 864 aaPredicted RBP16.45■□□□□ 0.22
CDC42EP1-204ENST00000434728 CCAR1Q8IX12 1150 aaKnown RBP16.45■□□□□ 0.22
CDC42EP1-204ENST00000434728 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.45■□□□□ 0.22
CDC42EP1-204ENST00000434728 MCAMP43121 646 aa16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 NECAB2Q7Z6G3 386 aa16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 SH3RF3Q8TEJ3 882 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 CLUAP1Q96AJ1 413 aa16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 ASCC2Q9H1I8 757 aaPredicted RBP16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 DHX36Q9H2U1 1008 aaKnown RBP16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 AATFQ9NY61 560 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
CDC42EP1-204ENST00000434728 MAST2Q6P0Q8 1798 aa16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 ASNSP08243 561 aa16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 TRIM27P14373 513 aa16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 MTMR2Q13614 643 aa16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 ATF7IPQ6VMQ6 1270 aa16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 PAWRQ96IZ0 340 aaKnown RBP16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 CWC22Q9HCG8 908 aaKnown RBP16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 PAK6Q9NQU5 681 aaPredicted RBP16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 SNRKQ9NRH2 765 aa16.43■□□□□ 0.22
CDC42EP1-204ENST00000434728 SZT2Q5T011 3432 aa16.42■□□□□ 0.22
CDC42EP1-204ENST00000434728 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
CDC42EP1-204ENST00000434728 PDE3AQ14432 1141 aa16.42■□□□□ 0.22
CDC42EP1-204ENST00000434728 MAPKAPK5Q8IW41 473 aa16.42■□□□□ 0.22
CDC42EP1-204ENST00000434728 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
CDC42EP1-204ENST00000434728 HMX1Q9NP08 348 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP1-204ENST00000434728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.42■□□□□ 0.22
CDC42EP1-204ENST00000434728 HLA-DOAP06340 250 aa16.41■□□□□ 0.22
CDC42EP1-204ENST00000434728 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
CDC42EP1-204ENST00000434728 A0A1W2PPC1 479 aa16.4■□□□□ 0.22
CDC42EP1-204ENST00000434728 BACE1P56817 501 aa16.4■□□□□ 0.22
CDC42EP1-204ENST00000434728 SH3D19Q5HYK7 790 aa16.4■□□□□ 0.22
CDC42EP1-204ENST00000434728 C7orf61Q8IZ16 206 aa16.4■□□□□ 0.22
CDC42EP1-204ENST00000434728 ANKLE1Q8NAG6 615 aa16.4■□□□□ 0.22
CDC42EP1-204ENST00000434728 DIS3LQ8TF46 1054 aaKnown RBP16.4■□□□□ 0.22
CDC42EP1-204ENST00000434728 CRISPLD2Q9H0B8 497 aa16.4■□□□□ 0.22
CDC42EP1-204ENST00000434728 RPTORQ8N122 1335 aa16.4■□□□□ 0.22
CDC42EP1-204ENST00000434728 C19orf81C9J6K1 198 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 USP17L10C9JJH3 530 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 BCAR3O75815 825 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 GDF11O95390 407 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 CYP2B6P20813 491 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 GPRC5AQ8NFJ5 357 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 SOCS4Q8WXH5 440 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 FEZ1Q99689 392 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 NUDT12Q9BQG2 462 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 WDR18Q9BV38 432 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 NBPF3Q9H094 633 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
CDC42EP1-204ENST00000434728 SAP30BPQ9UHR5 308 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms