RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 PHIPQ8WWQ0 1821 aa24.58■■□□□ 1.53
LMBR1-208ENST00000434278 SMARCA5O60264 1052 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-208ENST00000434278 TLR2O60603 784 aa24.58■■□□□ 1.53
LMBR1-208ENST00000434278 RRP1P56182 461 aaKnown RBP24.58■■□□□ 1.53
LMBR1-208ENST00000434278 TTF1Q15361 905 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-208ENST00000434278 DNAJC2Q99543 621 aaKnown RBP24.58■■□□□ 1.53
LMBR1-208ENST00000434278 LRRCC1Q9C099 1032 aa24.58■■□□□ 1.53
LMBR1-208ENST00000434278 DHX36Q9H2U1 1008 aaKnown RBP24.58■■□□□ 1.53
LMBR1-208ENST00000434278 PI4KBQ9UBF8 816 aa24.58■■□□□ 1.53
LMBR1-208ENST00000434278 PDHXO00330 501 aa24.57■■□□□ 1.52
LMBR1-208ENST00000434278 GOLIM4O00461 696 aa24.57■■□□□ 1.52
LMBR1-208ENST00000434278 EDC3Q96F86 508 aaKnown RBP24.57■■□□□ 1.52
LMBR1-208ENST00000434278 HERC5Q9UII4 1024 aaKnown RBP24.57■■□□□ 1.52
LMBR1-208ENST00000434278 PALD1Q9ULE6 856 aa24.57■■□□□ 1.52
LMBR1-208ENST00000434278 A0A0G2JLL6 359 aaPredicted RBP24.56■■□□□ 1.52
LMBR1-208ENST00000434278 GPAT2Q6NUI2 795 aa24.56■■□□□ 1.52
LMBR1-208ENST00000434278 TMED8Q6PL24 325 aaPredicted RBP24.56■■□□□ 1.52
LMBR1-208ENST00000434278 PRRT2Q7Z6L0 340 aaPredicted RBP24.56■■□□□ 1.52
LMBR1-208ENST00000434278 BOLA2Q9H3K6 86 aa24.56■■□□□ 1.52
LMBR1-208ENST00000434278 DCTPP1Q9H773 170 aa24.56■■□□□ 1.52
LMBR1-208ENST00000434278 SAP30BPQ9UHR5 308 aaKnown RBP24.56■■□□□ 1.52
LMBR1-208ENST00000434278 ATP5JP18859 108 aa24.55■■□□□ 1.52
LMBR1-208ENST00000434278 RGS19P49795 217 aa24.55■■□□□ 1.52
LMBR1-208ENST00000434278 RIOK1Q9BRS2 568 aaKnown RBP24.55■■□□□ 1.52
LMBR1-208ENST00000434278 DNAJC18Q9H819 358 aa24.55■■□□□ 1.52
LMBR1-208ENST00000434278 PCDHB15Q9Y5E8 787 aa24.55■■□□□ 1.52
LMBR1-208ENST00000434278 PDE6AP16499 860 aa24.54■■□□□ 1.52
LMBR1-208ENST00000434278 CAP2P40123 477 aa24.54■■□□□ 1.52
LMBR1-208ENST00000434278 SLC9C2Q5TAH2 1124 aa24.54■■□□□ 1.52
LMBR1-208ENST00000434278 METTL16Q86W50 562 aaKnown RBP24.54■■□□□ 1.52
LMBR1-208ENST00000434278 CERS3Q8IU89 383 aa24.54■■□□□ 1.52
LMBR1-208ENST00000434278 EFCC1Q9HA90 598 aa24.54■■□□□ 1.52
LMBR1-208ENST00000434278 ATAD5Q96QE3 1844 aa24.54■■□□□ 1.52
LMBR1-208ENST00000434278 PTPRFP10586 1907 aa24.53■■□□□ 1.52
LMBR1-208ENST00000434278 TRIM75PA6NK02 468 aa24.53■■□□□ 1.52
LMBR1-208ENST00000434278 SOX10P56693 466 aa24.53■■□□□ 1.52
LMBR1-208ENST00000434278 SLC4A8Q2Y0W8 1093 aa24.53■■□□□ 1.52
LMBR1-208ENST00000434278 C17orf99Q6UX52 265 aa24.53■■□□□ 1.52
LMBR1-208ENST00000434278 FOXP4Q8IVH2 680 aaPredicted RBP24.53■■□□□ 1.52
LMBR1-208ENST00000434278 PAG1Q9NWQ8 432 aa24.53■■□□□ 1.52
LMBR1-208ENST00000434278 PTPN22Q9Y2R2 807 aa24.53■■□□□ 1.52
LMBR1-208ENST00000434278 ADGRA2Q96PE1 1338 aa24.53■■□□□ 1.52
LMBR1-208ENST00000434278 TCRBV5S4A2TA0A5A2 114 aa24.52■■□□□ 1.52
LMBR1-208ENST00000434278 USP5P45974 858 aa24.52■■□□□ 1.52
LMBR1-208ENST00000434278 GADL1Q6ZQY3 521 aa24.52■■□□□ 1.52
LMBR1-208ENST00000434278 FASTKD5Q7L8L6 764 aaKnown RBP24.52■■□□□ 1.52
LMBR1-208ENST00000434278 HAUS7Q99871 368 aa24.52■■□□□ 1.52
LMBR1-208ENST00000434278 CPA4Q9UI42 421 aa24.52■■□□□ 1.52
LMBR1-208ENST00000434278 ZNF532Q9HCE3 1301 aa24.52■■□□□ 1.52
LMBR1-208ENST00000434278 MYH1P12882 1939 aa24.51■■□□□ 1.51
LMBR1-208ENST00000434278 MAGEB6P1A0A0J9YX57 407 aa24.51■■□□□ 1.51
LMBR1-208ENST00000434278 JAG1P78504 1218 aa24.51■■□□□ 1.51
LMBR1-208ENST00000434278 CRACR2BQ8N4Y2 399 aaPredicted RBP24.51■■□□□ 1.51
LMBR1-208ENST00000434278 ARHGAP39Q9C0H5 1083 aa24.51■■□□□ 1.51
LMBR1-208ENST00000434278 ZSWIM8A7E2V4 1837 aa24.51■■□□□ 1.51
LMBR1-208ENST00000434278 HLA-DOAP06340 250 aa24.5■■□□□ 1.51
LMBR1-208ENST00000434278 CYP2C8P10632 490 aa24.5■■□□□ 1.51
LMBR1-208ENST00000434278 LACTBP83111 547 aaPredicted RBP24.49■■□□□ 1.51
LMBR1-208ENST00000434278 SPP2Q13103 211 aa24.49■■□□□ 1.51
LMBR1-208ENST00000434278 SHROOM1Q2M3G4 852 aaPredicted RBP24.49■■□□□ 1.51
LMBR1-208ENST00000434278 SLFNL1Q499Z3 407 aa24.49■■□□□ 1.51
LMBR1-208ENST00000434278 ZNF280CQ8ND82 737 aa24.49■■□□□ 1.51
LMBR1-208ENST00000434278 CRBNQ96SW2 442 aa24.49■■□□□ 1.51
LMBR1-208ENST00000434278 PARK7Q99497 189 aaKnown RBP24.49■■□□□ 1.51
LMBR1-208ENST00000434278 TRIM34Q9BYJ4 488 aa24.49■■□□□ 1.51
LMBR1-208ENST00000434278 USP17L5A8MUK1 530 aa24.48■■□□□ 1.51
LMBR1-208ENST00000434278 GDF11O95390 407 aa24.47■■□□□ 1.51
LMBR1-208ENST00000434278 CHGBP05060 677 aa24.47■■□□□ 1.51
LMBR1-208ENST00000434278 ADD2P35612 726 aa24.47■■□□□ 1.51
LMBR1-208ENST00000434278 TREML2Q5T2D2 321 aa24.47■■□□□ 1.51
LMBR1-208ENST00000434278 LCORLQ8N3X6 602 aa24.47■■□□□ 1.51
LMBR1-208ENST00000434278 TBC1D2Q9BYX2 928 aa24.47■■□□□ 1.51
LMBR1-208ENST00000434278 ECHDC1Q9NTX5 307 aa24.47■■□□□ 1.51
LMBR1-208ENST00000434278 SLC45A1Q9Y2W3 748 aa24.47■■□□□ 1.51
LMBR1-208ENST00000434278 DDX60LQ5H9U9 1706 aaKnown RBP24.47■■□□□ 1.51
LMBR1-208ENST00000434278 ECM2O94769 699 aaPredicted RBP24.46■■□□□ 1.51
LMBR1-208ENST00000434278 CTGFP29279 349 aa24.46■■□□□ 1.51
LMBR1-208ENST00000434278 MLLT1Q03111 559 aaPredicted RBP24.46■■□□□ 1.51
LMBR1-208ENST00000434278 ARHGEF6Q15052 776 aa24.46■■□□□ 1.51
LMBR1-208ENST00000434278 AGTPBP1Q9UPW5 1226 aa24.46■■□□□ 1.51
LMBR1-208ENST00000434278 ASNSP08243 561 aa24.45■■□□□ 1.5
LMBR1-208ENST00000434278 BCRP11274 1271 aa24.45■■□□□ 1.5
LMBR1-208ENST00000434278 KIF22Q14807 665 aa24.45■■□□□ 1.5
LMBR1-208ENST00000434278 TTC6Q86TZ1 520 aa24.45■■□□□ 1.5
LMBR1-208ENST00000434278 CRNKL1Q9BZJ0 848 aaKnown RBP24.45■■□□□ 1.5
LMBR1-208ENST00000434278 EHD4Q9H223 541 aa24.45■■□□□ 1.5
LMBR1-208ENST00000434278 ARMT1Q9H993 441 aa24.45■■□□□ 1.5
LMBR1-208ENST00000434278 AS3MTQ9HBK9 375 aa24.45■■□□□ 1.5
LMBR1-208ENST00000434278 NAV1Q8NEY1 1877 aa24.45■■□□□ 1.5
LMBR1-208ENST00000434278 LOC285556D6RIA3 1793 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 PLCD1P51178 756 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 HMGCS2P54868 508 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 TSHZ3Q63HK5 1081 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 TATDN1Q6P1N9 297 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 PROCA1Q8NCQ7 364 aaPredicted RBP24.44■■□□□ 1.5
LMBR1-208ENST00000434278 SDR42E1Q8WUS8 393 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 WDR18Q9BV38 432 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.44■■□□□ 1.52e-6■■■□□ 16.9
LMBR1-208ENST00000434278 SERPINB13Q9UIV8 391 aa24.44■■□□□ 1.5
LMBR1-208ENST00000434278 ZBTB21Q9ULJ3 1066 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms