RNA–Protein interactions for RNA: ENST00000434013.6

NPC2-202, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 875 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-202ENST00000434013 APPBP2Q92624 585 aa13.19□□□□□ -0.3
NPC2-202ENST00000434013 OSBPL5Q9H0X9 879 aaPredicted RBP13.19□□□□□ -0.3
NPC2-202ENST00000434013 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
NPC2-202ENST00000434013 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
NPC2-202ENST00000434013 CHGBP05060 677 aa13.18□□□□□ -0.3
NPC2-202ENST00000434013 MIGA2Q7L4E1 593 aa13.18□□□□□ -0.3
NPC2-202ENST00000434013 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
NPC2-202ENST00000434013 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
NPC2-202ENST00000434013 ARMT1Q9H993 441 aa13.18□□□□□ -0.3
NPC2-202ENST00000434013 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.18□□□□□ -0.3
NPC2-202ENST00000434013 NAV1Q8NEY1 1877 aa13.18□□□□□ -0.3
NPC2-202ENST00000434013 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
NPC2-202ENST00000434013 DDTLA6NHG4 134 aaPredicted RBP13.17□□□□□ -0.3
NPC2-202ENST00000434013 FKTNO75072 461 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 USP2O75604 605 aaPredicted RBP13.17□□□□□ -0.3
NPC2-202ENST00000434013 SOX10P56693 466 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 SH3BP5LQ7L8J4 393 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 ANKRD13AQ8IZ07 590 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 RILPL2Q969X0 211 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 WRNIP1Q96S55 665 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
NPC2-202ENST00000434013 SAP30BPQ9UHR5 308 aaKnown RBP13.17□□□□□ -0.3
NPC2-202ENST00000434013 CSADQ9Y600 493 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 CASP8AP2Q9UKL3 1982 aa13.17□□□□□ -0.3
NPC2-202ENST00000434013 TESPA1A2RU30 521 aaPredicted RBP13.16□□□□□ -0.3
NPC2-202ENST00000434013 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
NPC2-202ENST00000434013 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
NPC2-202ENST00000434013 DDRGK1Q96HY6 314 aa13.16□□□□□ -0.3
NPC2-202ENST00000434013 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
NPC2-202ENST00000434013 MYH1P12882 1939 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 SLC4A8Q2Y0W8 1093 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 TTC22Q5TAA0 569 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■■□ 20.1
NPC2-202ENST00000434013 SDR42E1Q8WUS8 393 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 OSBP2Q969R2 916 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 CLMNQ96JQ2 1002 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 TRIM34Q9BYJ4 488 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 PI4KBQ9UBF8 816 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 PALD1Q9ULE6 856 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 SLC4A4Q9Y6R1 1079 aa13.15□□□□□ -0.3
NPC2-202ENST00000434013 DDX60LQ5H9U9 1706 aaKnown RBP13.15□□□□□ -0.3
NPC2-202ENST00000434013 M0R2C6 588 aa13.14□□□□□ -0.31
NPC2-202ENST00000434013 GPAA1O43292 621 aa13.14□□□□□ -0.31
NPC2-202ENST00000434013 VGLL4Q14135 290 aa13.14□□□□□ -0.31
NPC2-202ENST00000434013 ZMYM1Q5SVZ6 1142 aa13.14□□□□□ -0.31
NPC2-202ENST00000434013 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
NPC2-202ENST00000434013 CRACR2BQ8N4Y2 399 aaPredicted RBP13.14□□□□□ -0.31
NPC2-202ENST00000434013 SLC10A4Q96EP9 437 aa13.14□□□□□ -0.31
NPC2-202ENST00000434013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.14□□□□□ -0.31
NPC2-202ENST00000434013 ATP8A2Q9NTI2 1148 aa13.14□□□□□ -0.31
NPC2-202ENST00000434013 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
NPC2-202ENST00000434013 FAM196BA6NMK8 535 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 PRKAB2O43741 272 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 TBC1D12O60347 775 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
NPC2-202ENST00000434013 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
NPC2-202ENST00000434013 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.13□□□□□ -0.31
NPC2-202ENST00000434013 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 WNK4Q96J92 1243 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
NPC2-202ENST00000434013 ELP3Q9H9T3 547 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 DCP1AQ9NPI6 582 aaPredicted RBP13.13□□□□□ -0.31
NPC2-202ENST00000434013 DIAPH3Q9NSV4 1193 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 HERC5Q9UII4 1024 aaKnown RBP13.13□□□□□ -0.31
NPC2-202ENST00000434013 SIPA1L1O43166 1804 aa13.13□□□□□ -0.31
NPC2-202ENST00000434013 TNRC18O15417 2968 aaPredicted RBP13.12□□□□□ -0.31
NPC2-202ENST00000434013 SLURP2P0DP57 97 aa13.12□□□□□ -0.31
NPC2-202ENST00000434013 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
NPC2-202ENST00000434013 GNAT2P19087 354 aa13.12□□□□□ -0.31
NPC2-202ENST00000434013 INPP5BP32019 993 aa13.12□□□□□ -0.31
NPC2-202ENST00000434013 ZKSCAN4Q969J2 545 aaPredicted RBP13.12□□□□□ -0.31
NPC2-202ENST00000434013 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
NPC2-202ENST00000434013 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
NPC2-202ENST00000434013 PICK1Q9NRD5 415 aa13.12□□□□□ -0.31
NPC2-202ENST00000434013 ZNF112Q9UJU3 913 aa13.12□□□□□ -0.31
NPC2-202ENST00000434013 PDE4DIPQ5VU43 2346 aa13.12□□□□□ -0.31
NPC2-202ENST00000434013 BAZ2AQ9UIF9 1905 aaKnown RBP13.11□□□□□ -0.31
NPC2-202ENST00000434013 DOCK1Q14185 1865 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 A0A0D9SFI3 127 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 HIP1O00291 1037 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 APPP05067 770 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 SDSP20132 328 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 MAP3K10Q02779 954 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 NMIQ13287 307 aaPredicted RBP13.11□□□□□ -0.31
NPC2-202ENST00000434013 NOL9Q5SY16 702 aaKnown RBP13.11□□□□□ -0.31
NPC2-202ENST00000434013 CCDC129Q6ZRS4 1044 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 OTOP1Q7RTM1 612 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
NPC2-202ENST00000434013 OPTNQ96CV9 577 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 ERO1AQ96HE7 468 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 FAM227BQ96M60 508 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 EHD4Q9H223 541 aa13.11□□□□□ -0.31
NPC2-202ENST00000434013 ZCCHC17Q9NP64 241 aaKnown RBP13.11□□□□□ -0.31
NPC2-202ENST00000434013 HELLSQ9NRZ9 838 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms