RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SH3BP5LQ7L8J4 393 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 ZSCAN30Q86W11 494 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 SIL1Q9H173 461 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 TSPY26PQ9H489 355 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 AKAP2Q9Y2D5 859 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 KIF3AQ9Y496 699 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 MYH3P11055 1940 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 SBF2Q86WG5 1849 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 WDR19Q8NEZ3 1342 aa8.8□□□□□ -1
COL17A1-204ENST00000433822 MAGEB6P1A0A0J9YX57 407 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 CSF1RP07333 972 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 HMGN5P82970 282 aaKnown RBP8.79□□□□□ -1
COL17A1-204ENST00000433822 ST3GAL1Q11201 340 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 TOB2Q14106 344 aaPredicted RBP8.79□□□□□ -1
COL17A1-204ENST00000433822 ATL3Q6DD88 541 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 ZNF589Q86UQ0 364 aaPredicted RBP8.79□□□□□ -1
COL17A1-204ENST00000433822 USP48Q86UV5 1035 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 ZC3H15Q8WU90 426 aaKnown RBP8.79□□□□□ -1
COL17A1-204ENST00000433822 AK7Q96M32 723 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 NEK1Q96PY6 1258 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
COL17A1-204ENST00000433822 SCAND2PQ9GZW5 306 aaPredicted RBP8.79□□□□□ -1
COL17A1-204ENST00000433822 RBSNQ9H1K0 784 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 TMOD3Q9NYL9 352 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 BCL9O00512 1426 aa8.79□□□□□ -1
COL17A1-204ENST00000433822 MYH7P12883 1935 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 FIGNL2A6NMB9 653 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 ERVV-1B6SEH8 477 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 ATP5J2-PTCD1G3V325 749 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 ZNF500O60304 480 aaPredicted RBP8.78□□□□□ -1
COL17A1-204ENST00000433822 PTCD1O75127 700 aaKnown RBP8.78□□□□□ -1
COL17A1-204ENST00000433822 LARGE1O95461 756 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 STARD3NLO95772 234 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 APBA3O96018 575 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 EVCP57679 992 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 KRT85P78386 507 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 TTLL7Q6ZT98 887 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 CCDC83Q8IWF9 413 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 SVOPQ8N4V2 548 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 CCDC155Q8N6L0 562 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 ZBTB38Q8NAP3 1195 aaPredicted RBP8.78□□□□□ -1
COL17A1-204ENST00000433822 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
COL17A1-204ENST00000433822 GTF3C6Q969F1 213 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 DBNDD2Q9BQY9 259 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 ZSCAN16Q9H4T2 348 aaPredicted RBP8.78□□□□□ -1
COL17A1-204ENST00000433822 PAG1Q9NWQ8 432 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 PGPEP1Q9NXJ5 209 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 TPCN1Q9ULQ1 816 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 NOL7Q9UMY1 257 aaKnown RBP8.78□□□□□ -1
COL17A1-204ENST00000433822 RGPD3A6NKT7 1758 aaPredicted RBP8.78□□□□□ -1
COL17A1-204ENST00000433822 RGPD4Q7Z3J3 1758 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 MAP3K15Q6ZN16 1313 aa8.78□□□□□ -1
COL17A1-204ENST00000433822 LAMA4Q16363 1823 aa8.77□□□□□ -1
COL17A1-204ENST00000433822 ARAP2Q8WZ64 1704 aa8.77□□□□□ -1
COL17A1-204ENST00000433822 SYCE3A1L190 88 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 SPINT1O43278 529 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 LARP1BQ659C4 914 aaKnown RBP8.77□□□□□ -1.01
COL17A1-204ENST00000433822 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1.01
COL17A1-204ENST00000433822 KIF6Q6ZMV9 814 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 Q6ZVU0 165 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 DHX32Q7L7V1 743 aaKnown RBP8.77□□□□□ -1.01
COL17A1-204ENST00000433822 HELBQ8NG08 1087 aaPredicted RBP8.77□□□□□ -1.01
COL17A1-204ENST00000433822 SMARCC2Q8TAQ2 1214 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 KLHDC4Q8TBB5 520 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 CEP126Q9P2H0 1117 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 CCDC39Q9UFE4 941 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 CTNNA3Q9UI47 895 aa8.77□□□□□ -1.01
COL17A1-204ENST00000433822 NSFL1CQ9UNZ2 370 aaKnown RBP8.77□□□□□ -1.01
COL17A1-204ENST00000433822 DDX60Q8IY21 1712 aaKnown RBP8.77□□□□□ -1.01
COL17A1-204ENST00000433822 A0A1B0GUL7 405 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 PFKFB2O60825 505 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 LILRB3O75022 631 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 CAVIN2O95810 425 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 A1BGP04217 495 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 EVA1CP58658 441 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 EXOSC10Q01780 885 aaKnown RBP8.76□□□□□ -1.01
COL17A1-204ENST00000433822 QPCTQ16769 361 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 CCDC57Q2TAC2 916 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 CCDC158Q5M9N0 1113 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-204ENST00000433822 NAA16Q6N069 864 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-204ENST00000433822 RBM43Q6ZSC3 357 aaKnown RBP8.76□□□□□ -1.01
COL17A1-204ENST00000433822 NOL8Q76FK4 1167 aaKnown RBP8.76□□□□□ -1.01
COL17A1-204ENST00000433822 ZNF274Q96GC6 653 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-204ENST00000433822 FUCA2Q9BTY2 467 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 CNPY2Q9Y2B0 182 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 ZMYM6O95789 1325 aa8.76□□□□□ -1.01
COL17A1-204ENST00000433822 SLC35F4A4IF30 521 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 TRIM66O15016 1216 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 RNF113AO15541 343 aaKnown RBP8.75□□□□□ -1.01
COL17A1-204ENST00000433822 CYP21A2P08686 494 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 IFIT1P09914 478 aaKnown RBP8.75□□□□□ -1.01
COL17A1-204ENST00000433822 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 MSNP26038 577 aaKnown RBP8.75□□□□□ -1.01
COL17A1-204ENST00000433822 IL6STP40189 918 aaPredicted RBP8.75□□□□□ -1.01
COL17A1-204ENST00000433822 RNFT1Q5M7Z0 435 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 DDX19AQ9NUU7 478 aaKnown RBP8.75□□□□□ -1.01
COL17A1-204ENST00000433822 LIMD1Q9UGP4 676 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms