RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 KIF28PB7ZC32 967 aa22.78■■□□□ 1.24
VRK2-205ENST00000432057 LETM1O95202 739 aaPredicted RBP22.78■■□□□ 1.24
VRK2-205ENST00000432057 SBK1Q52WX2 424 aa22.78■■□□□ 1.24
VRK2-205ENST00000432057 ENAHQ8N8S7 591 aaPredicted RBP22.78■■□□□ 1.24
VRK2-205ENST00000432057 ZSCAN10Q96SZ4 725 aaPredicted RBP22.78■■□□□ 1.24
VRK2-205ENST00000432057 SLC26A6Q9BXS9 759 aa22.78■■□□□ 1.24
VRK2-205ENST00000432057 TAOK2Q9UL54 1235 aa22.78■■□□□ 1.24
VRK2-205ENST00000432057 UBE2Q2LH0YL09 131 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 USP17L8P0C7I0 530 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 KIF23Q02241 960 aaPredicted RBP22.77■■□□□ 1.24
VRK2-205ENST00000432057 SLC4A8Q2Y0W8 1093 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 ATL3Q6DD88 541 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 OLFM4Q6UX06 510 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 BICD2Q8TD16 824 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 MCM9Q9NXL9 1143 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 RCOR1Q9UKL0 485 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 ORC4O43929 436 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 FMNL1O95466 1100 aaPredicted RBP22.77■■□□□ 1.24
VRK2-205ENST00000432057 IFNAR1P17181 557 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 USP5P45974 858 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 SSRP1Q08945 709 aaKnown RBP22.77■■□□□ 1.24
VRK2-205ENST00000432057 RNF214Q8ND24 703 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 NUP133Q8WUM0 1156 aa22.77■■□□□ 1.24
VRK2-205ENST00000432057 ADAMTSL1Q8N6G6 1762 aa22.76■■□□□ 1.23
VRK2-205ENST00000432057 PDE6BP35913 854 aa22.76■■□□□ 1.23
VRK2-205ENST00000432057 KRT40Q6A162 431 aa22.76■■□□□ 1.23
VRK2-205ENST00000432057 NOL10Q9BSC4 688 aaKnown RBP22.76■■□□□ 1.23
VRK2-205ENST00000432057 RTFDC1Q9BY42 306 aaPredicted RBP22.76■■□□□ 1.23
VRK2-205ENST00000432057 MKRN1Q9UHC7 482 aaKnown RBP22.76■■□□□ 1.23
VRK2-205ENST00000432057 RIMBP2O15034 1052 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 BAG3O95817 575 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 POLR3DP05423 398 aaPredicted RBP22.75■■□□□ 1.23
VRK2-205ENST00000432057 LDHCP07864 332 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 RCAN1P53805 252 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 BRAPQ7Z569 592 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 RGS22Q8NE09 1264 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 SLC3A2P08195 630 aaKnown RBP22.75■■□□□ 1.23
VRK2-205ENST00000432057 PPP4CP60510 307 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 MFSD14BQ5SR56 506 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 IQCA1Q86XH1 822 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 NUP62CLQ9H1M0 184 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 ANO8Q9HCE9 1232 aaPredicted RBP22.75■■□□□ 1.23
VRK2-205ENST00000432057 DACT1Q9NYF0 836 aa22.75■■□□□ 1.23
VRK2-205ENST00000432057 SLX4Q8IY92 1834 aa22.74■■□□□ 1.23
VRK2-205ENST00000432057 FAM47AQ5JRC9 791 aa22.74■■□□□ 1.23
VRK2-205ENST00000432057 IFIT1BQ5T764 474 aaKnown RBP22.74■■□□□ 1.23
VRK2-205ENST00000432057 MYSM1Q5VVJ2 828 aa22.74■■□□□ 1.23
VRK2-205ENST00000432057 CMTR1Q8N1G2 835 aaKnown RBP22.74■■□□□ 1.23
VRK2-205ENST00000432057 FANCBQ8NB91 859 aa22.74■■□□□ 1.23
VRK2-205ENST00000432057 BTDP43251 543 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 NBPF11Q86T75 865 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 FAM205AQ6ZU69 1335 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 ALDH1B1P30837 517 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 GUCY1A2P33402 732 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 PDE4BQ07343 736 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 C12orf60Q5U649 245 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 MPNDQ8N594 471 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 TGFBRAP1Q8WUH2 860 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 MASTLQ96GX5 879 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 FUCA2Q9BTY2 467 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 RTEL1Q9NZ71 1219 aa22.73■■□□□ 1.23
VRK2-205ENST00000432057 ROBO3Q96MS0 1386 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 CCDC196A0A1B0GTZ2 297 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 NMT2O60551 498 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 NR1I2O75469 434 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 CCDC173Q0VFZ6 552 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 TRIM22Q8IYM9 498 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 CCDC82Q8N4S0 544 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 TBC1D22AQ8WUA7 517 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 ANP32BQ92688 251 aaKnown RBP22.72■■□□□ 1.23
VRK2-205ENST00000432057 DDX19AQ9NUU7 478 aaKnown RBP22.72■■□□□ 1.23
VRK2-205ENST00000432057 CLIC4Q9Y696 253 aa22.72■■□□□ 1.23
VRK2-205ENST00000432057 MYH8P13535 1937 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 GTF2IP78347 998 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 TRIM29Q14134 588 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 EZH2Q15910 746 aaKnown RBP22.71■■□□□ 1.23
VRK2-205ENST00000432057 CAMK4Q16566 473 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 MAPKAPK5Q8IW41 473 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 CRACR2BQ8N4Y2 399 aaPredicted RBP22.71■■□□□ 1.23
VRK2-205ENST00000432057 ZNF646O15015 1829 aaPredicted RBP22.71■■□□□ 1.23
VRK2-205ENST00000432057 DPP8Q6V1X1 898 aaPredicted RBP22.71■■□□□ 1.23
VRK2-205ENST00000432057 CATIPQ7Z7H3 387 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 WASF1Q92558 559 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 DYNLL2Q96FJ2 89 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 COA1Q9GZY4 146 aa22.71■■□□□ 1.23
VRK2-205ENST00000432057 GPR75-ASB3A0A0A6YYF3 556 aa22.7■■□□□ 1.22
VRK2-205ENST00000432057 MAP3K11Q16584 847 aa22.7■■□□□ 1.22
VRK2-205ENST00000432057 FBXW7Q969H0 707 aa22.7■■□□□ 1.22
VRK2-205ENST00000432057 ZNF622Q969S3 477 aaKnown RBP eCLIP22.7■■□□□ 1.22
VRK2-205ENST00000432057 PPP1R9BQ96SB3 815 aa22.7■■□□□ 1.22
VRK2-205ENST00000432057 CLSTN2Q9H4D0 955 aa22.7■■□□□ 1.22
VRK2-205ENST00000432057 TSPY2A6NKD2 308 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 ME1P48163 572 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 EN1Q05925 392 aaPredicted RBP22.69■■□□□ 1.22
VRK2-205ENST00000432057 STK38Q15208 465 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 C2CD5Q86YS7 1000 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 CCAR1Q8IX12 1150 aaKnown RBP22.69■■□□□ 1.22
VRK2-205ENST00000432057 TEX11Q8IYF3 940 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 LINC00301Q8NCQ3 95 aa22.69■■□□□ 1.22
VRK2-205ENST00000432057 CAMKK2Q96RR4 588 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms