RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 TXLNAP40222 546 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 UBASH3AP57075 661 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 C3orf67Q6ZVT6 689 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 MAPKAPK5Q8IW41 473 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 TRPM3Q9HCF6 1732 aaPredicted RBP13.07□□□□□ -0.32
CLDN4-202ENST00000431918 STX17P56962 302 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 PTPN14Q15678 1187 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 PTPN21Q16825 1174 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
CLDN4-202ENST00000431918 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 GUCY1A2P33402 732 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 MCM7P33993 719 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 KRT2P35908 639 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 ST5P78524 1137 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 DMTNQ08495 405 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 HEATR3Q7Z4Q2 680 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 ZSCAN29Q8IWY8 852 aaPredicted RBP13.07□□□□□ -0.32
CLDN4-202ENST00000431918 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 CPLX3Q8WVH0 158 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 ZSCAN10Q96SZ4 725 aaPredicted RBP13.07□□□□□ -0.32
CLDN4-202ENST00000431918 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 BSDC1Q9NW68 430 aaPredicted RBP13.07□□□□□ -0.32
CLDN4-202ENST00000431918 VWA3AA6NCI4 1184 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 MPHOSPH10O00566 681 aaKnown RBP13.06□□□□□ -0.32
CLDN4-202ENST00000431918 KIF5BP33176 963 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 C5P01031 1676 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 SCN11AQ9UI33 1791 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 LDHCP07864 332 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 CYP2D6P10635 497 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 TOP1P11387 765 aaKnown RBP13.06□□□□□ -0.32
CLDN4-202ENST00000431918 KLRK1P26718 216 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 TFAP4Q01664 338 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 SLC39A14Q15043 492 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 CLEC4GQ6UXB4 293 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 TMX1Q9H3N1 280 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 MRC1P22897 1456 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 MECOMQ03112 1051 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
CLDN4-202ENST00000431918 ZNF804AQ7Z570 1209 aa13.06□□□□□ -0.32
CLDN4-202ENST00000431918 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
CLDN4-202ENST00000431918 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLDN4-202ENST00000431918 DYNC1I1O14576 645 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 NMT2O60551 498 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 PIK3AP1Q6ZUJ8 805 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 VGLL2Q8N8G2 317 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
CLDN4-202ENST00000431918 PLIN2Q99541 437 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 CMA1P23946 247 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 LIFRP42702 1097 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 IGDCC4Q8TDY8 1250 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
CLDN4-202ENST00000431918 DACH1Q9UI36 760 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 CBFA2T2O43439 604 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 IGSF3O75054 1194 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 TICAM2Q86XR7 235 aa13.05□□□□□ -0.32
CLDN4-202ENST00000431918 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
CLDN4-202ENST00000431918 ARHGEF1Q92888 912 aaKnown RBP13.05□□□□□ -0.32
CLDN4-202ENST00000431918 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 AP5Z1O43299 807 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 CUTAO60888 179 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 TPM1P09493 284 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 FGFR2P21802 821 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 ARID5BQ14865 1188 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 TRMT44Q8IYL2 757 aaKnown RBP13.04□□□□□ -0.32
CLDN4-202ENST00000431918 ANKRD20A12PQ8NF67 263 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 ALS2Q96Q42 1657 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
CLDN4-202ENST00000431918 IFNAR1P17181 557 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
CLDN4-202ENST00000431918 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 RIC1Q4ADV7 1423 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 A0A1W2PQ27 194 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 A0A1W2PQ64 194 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 A0A1W2PQD8 194 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
CLDN4-202ENST00000431918 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
CLDN4-202ENST00000431918 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
CLDN4-202ENST00000431918 KIF20AO95235 890 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 PLEKHA8P1O95397 391 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 FMNL1O95466 1100 aaPredicted RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 TEX11Q8IYF3 940 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 GRAMD1CQ8IYS0 662 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 NLRP12P59046 1061 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 DYNLL2Q96FJ2 89 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 AGXT2Q9BYV1 514 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
CLDN4-202ENST00000431918 WDHD1O75717 1129 aaPredicted RBP13.03□□□□□ -0.32
CLDN4-202ENST00000431918 CALM1P0DP23 149 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms