RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ZAP70P43403 619 aa17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 GSTO1P78417 241 aa17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 ATP8B2P98198 1209 aa17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 MAP3K10Q02779 954 aa17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 SPP2Q13103 211 aa17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 MAPKAPK5Q8IW41 473 aa17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 TGFBRAP1Q8WUH2 860 aa17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 SAP30BPQ9UHR5 308 aaKnown RBP17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 PEX10O60683 326 aa17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 LDHCP07864 332 aa17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 UQCRFS1P1P0C7P4 283 aa17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 ELNP15502 786 aa17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 GRK4P32298 578 aa17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 DYNLL1P63167 89 aaKnown RBP17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 JAG1P78504 1218 aa17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 FASTKD5Q7L8L6 764 aaKnown RBP17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 ANKRD13CQ8N6S4 541 aa17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
SMARCE1-205ENST00000431889 FCGRTP55899 365 aa17.5■□□□□ 0.39
SMARCE1-205ENST00000431889 PANK1Q8TE04 598 aa17.5■□□□□ 0.39
SMARCE1-205ENST00000431889 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
SMARCE1-205ENST00000431889 DBNLQ9UJU6 430 aaKnown RBP17.5■□□□□ 0.39
SMARCE1-205ENST00000431889 MAST2Q6P0Q8 1798 aa17.5■□□□□ 0.39
SMARCE1-205ENST00000431889 CCL5P13501 91 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 HMGCS2P54868 508 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 CCDC158Q5M9N0 1113 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 DOCK3Q8IZD9 2030 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 ZBTB22O15209 634 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 GDF11O95390 407 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 GNRH1P01148 92 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 HOXD10P28358 340 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 RNF208Q9H0X6 261 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 PALD1Q9ULE6 856 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 EXOC6BQ9Y2D4 811 aa17.49■□□□□ 0.39
SMARCE1-205ENST00000431889 APBB1O00213 710 aa17.48■□□□□ 0.39
SMARCE1-205ENST00000431889 FLT3LGP49771 235 aa17.48■□□□□ 0.39
SMARCE1-205ENST00000431889 MIGA1Q8NAN2 632 aa17.48■□□□□ 0.39
SMARCE1-205ENST00000431889 EAF2Q96CJ1 260 aaPredicted RBP17.48■□□□□ 0.39
SMARCE1-205ENST00000431889 UNC93B1Q9H1C4 597 aa17.48■□□□□ 0.39
SMARCE1-205ENST00000431889 AGTPBP1Q9UPW5 1226 aa17.48■□□□□ 0.39
SMARCE1-205ENST00000431889 TNPO2O14787 897 aaKnown RBP17.47■□□□□ 0.39
SMARCE1-205ENST00000431889 TBC1D12O60347 775 aa17.47■□□□□ 0.39
SMARCE1-205ENST00000431889 CAP2P40123 477 aa17.47■□□□□ 0.39
SMARCE1-205ENST00000431889 PRMT2P55345 433 aa17.47■□□□□ 0.39
SMARCE1-205ENST00000431889 HABP4Q5JVS0 413 aaKnown RBP17.47■□□□□ 0.39
SMARCE1-205ENST00000431889 ZNF280CQ8ND82 737 aa17.47■□□□□ 0.39
SMARCE1-205ENST00000431889 ANTXR1Q9H6X2 564 aa17.47■□□□□ 0.39
SMARCE1-205ENST00000431889 DNAJC18Q9H819 358 aa17.47■□□□□ 0.39
SMARCE1-205ENST00000431889 FLT1P17948 1338 aa17.46■□□□□ 0.39
SMARCE1-205ENST00000431889 FOCADQ5VW36 1801 aa17.46■□□□□ 0.39
SMARCE1-205ENST00000431889 LOC285556D6RIA3 1793 aa17.46■□□□□ 0.39
SMARCE1-205ENST00000431889 H0YGN5 161 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 ADCY3O60266 1144 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 IDH1O75874 414 aaKnown RBP17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 CYP7A1P22680 504 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 MTMR2Q13614 643 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 CEP85Q6P2H3 762 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 IL1RAPL2Q9NP60 686 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 COLQQ9Y215 455 aaPredicted RBP17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 BAG3O95817 575 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 CRACR2BQ8N4Y2 399 aaPredicted RBP17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 DPF3Q92784 378 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 GPR108Q9NPR9 543 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 PI4KBQ9UBF8 816 aa17.45■□□□□ 0.38
SMARCE1-205ENST00000431889 USP17L5A8MUK1 530 aa17.44■□□□□ 0.38
SMARCE1-205ENST00000431889 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
SMARCE1-205ENST00000431889 INHAP05111 366 aa17.44■□□□□ 0.38
SMARCE1-205ENST00000431889 MAGEB6Q8N7X4 407 aa17.44■□□□□ 0.38
SMARCE1-205ENST00000431889 ASCC2Q9H1I8 757 aaPredicted RBP17.44■□□□□ 0.38
SMARCE1-205ENST00000431889 MYH1P12882 1939 aa17.44■□□□□ 0.38
SMARCE1-205ENST00000431889 SZT2Q5T011 3432 aa17.43■□□□□ 0.38
SMARCE1-205ENST00000431889 AACSQ86V21 672 aa17.43■□□□□ 0.38
SMARCE1-205ENST00000431889 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
SMARCE1-205ENST00000431889 SLC45A1Q9Y2W3 748 aa17.43■□□□□ 0.38
SMARCE1-205ENST00000431889 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
SMARCE1-205ENST00000431889 COL2A1P02458 1487 aaPredicted RBP17.42■□□□□ 0.38
SMARCE1-205ENST00000431889 GJA8P48165 433 aa17.42■□□□□ 0.38
SMARCE1-205ENST00000431889 UBXN2AP68543 259 aa17.42■□□□□ 0.38
SMARCE1-205ENST00000431889 TRIM32Q13049 653 aa17.42■□□□□ 0.38
SMARCE1-205ENST00000431889 ZYXQ15942 572 aaKnown RBP17.42■□□□□ 0.38
SMARCE1-205ENST00000431889 SLAIN1Q8ND83 568 aa17.42■□□□□ 0.38
SMARCE1-205ENST00000431889 HERC5Q9UII4 1024 aaKnown RBP17.42■□□□□ 0.38
SMARCE1-205ENST00000431889 PPP4CP60510 307 aa17.41■□□□□ 0.38
SMARCE1-205ENST00000431889 EVX2Q03828 476 aa17.41■□□□□ 0.38
SMARCE1-205ENST00000431889 PROCA1Q8NCQ7 364 aaPredicted RBP17.41■□□□□ 0.38
SMARCE1-205ENST00000431889 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
SMARCE1-205ENST00000431889 GCC1Q96CN9 775 aa17.41■□□□□ 0.38
SMARCE1-205ENST00000431889 PCDH10Q9P2E7 1040 aa17.41■□□□□ 0.38
SMARCE1-205ENST00000431889 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
SMARCE1-205ENST00000431889 GJB1P08034 283 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 USP5P45974 858 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 COA7Q96BR5 231 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 DEFB118Q96PH6 123 aa17.4■□□□□ 0.38
SMARCE1-205ENST00000431889 DHX36Q9H2U1 1008 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms