RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
SEC13-211ENST00000431352 UBXN2AP68543 259 aa17.08■□□□□ 0.32
SEC13-211ENST00000431352 SPP2Q13103 211 aa17.08■□□□□ 0.32
SEC13-211ENST00000431352 POLA2Q14181 598 aa17.08■□□□□ 0.32
SEC13-211ENST00000431352 NAA16Q6N069 864 aaPredicted RBP17.08■□□□□ 0.32
SEC13-211ENST00000431352 ITPRIPQ8IWB1 547 aa17.08■□□□□ 0.32
SEC13-211ENST00000431352 ANKRD13CQ8N6S4 541 aa17.08■□□□□ 0.32
SEC13-211ENST00000431352 RNF208Q9H0X6 261 aa17.08■□□□□ 0.32
SEC13-211ENST00000431352 PCDH10Q9P2E7 1040 aa17.08■□□□□ 0.32
SEC13-211ENST00000431352 SLC45A1Q9Y2W3 748 aa17.08■□□□□ 0.32
SEC13-211ENST00000431352 MGAMO43451 1857 aa17.07■□□□□ 0.32
SEC13-211ENST00000431352 COL2A1P02458 1487 aaPredicted RBP17.07■□□□□ 0.32
SEC13-211ENST00000431352 TBC1D12O60347 775 aa17.07■□□□□ 0.32
SEC13-211ENST00000431352 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
SEC13-211ENST00000431352 ELNP15502 786 aa17.07■□□□□ 0.32
SEC13-211ENST00000431352 FLT3LGP49771 235 aa17.07■□□□□ 0.32
SEC13-211ENST00000431352 HMGCS2P54868 508 aa17.07■□□□□ 0.32
SEC13-211ENST00000431352 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
SEC13-211ENST00000431352 CCDC158Q5M9N0 1113 aa17.07■□□□□ 0.32
SEC13-211ENST00000431352 SLAIN1Q8ND83 568 aa17.07■□□□□ 0.32
SEC13-211ENST00000431352 ATAD5Q96QE3 1844 aa17.06■□□□□ 0.32
SEC13-211ENST00000431352 H0YGN5 161 aa17.06■□□□□ 0.32
SEC13-211ENST00000431352 ADCY3O60266 1144 aa17.06■□□□□ 0.32
SEC13-211ENST00000431352 MAP4K4O95819 1239 aaPredicted RBP17.06■□□□□ 0.32
SEC13-211ENST00000431352 MAPKAPK5Q8IW41 473 aa17.06■□□□□ 0.32
SEC13-211ENST00000431352 ZNF280CQ8ND82 737 aa17.06■□□□□ 0.32
SEC13-211ENST00000431352 UNC93B1Q9H1C4 597 aa17.06■□□□□ 0.32
SEC13-211ENST00000431352 TLR7Q9NYK1 1049 aaKnown RBP17.06■□□□□ 0.32
SEC13-211ENST00000431352 PNMA3Q9UL41 463 aa17.06■□□□□ 0.32
SEC13-211ENST00000431352 CEP290O15078 2479 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 BAG3O95817 575 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 ADGRA1Q86SQ6 560 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 NKX2-3Q8TAU0 364 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 TGFBRAP1Q8WUH2 860 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 DPF3Q92784 378 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 TRIM34Q9BYJ4 488 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 GPR108Q9NPR9 543 aa17.05■□□□□ 0.32
SEC13-211ENST00000431352 COLQQ9Y215 455 aaPredicted RBP17.05■□□□□ 0.32
SEC13-211ENST00000431352 FLT1P17948 1338 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 USP17L5A8MUK1 530 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 INHAP05111 366 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
SEC13-211ENST00000431352 GJB1P08034 283 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 RLBP1P12271 317 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 CAP2P40123 477 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 ZAP70P43403 619 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 GJA8P48165 433 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 CRACR2BQ8N4Y2 399 aaPredicted RBP17.04■□□□□ 0.32
SEC13-211ENST00000431352 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
SEC13-211ENST00000431352 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
SEC13-211ENST00000431352 SAP30BPQ9UHR5 308 aaKnown RBP17.04■□□□□ 0.32
SEC13-211ENST00000431352 HERC5Q9UII4 1024 aaKnown RBP17.04■□□□□ 0.32
SEC13-211ENST00000431352 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
SEC13-211ENST00000431352 SIPA1L1O43166 1804 aa17.03■□□□□ 0.32
SEC13-211ENST00000431352 PLCG2P16885 1265 aa17.03■□□□□ 0.32
SEC13-211ENST00000431352 MTMR2Q13614 643 aa17.03■□□□□ 0.32
SEC13-211ENST00000431352 SHROOM1Q2M3G4 852 aaPredicted RBP17.03■□□□□ 0.32
SEC13-211ENST00000431352 PROCA1Q8NCQ7 364 aaPredicted RBP17.03■□□□□ 0.32
SEC13-211ENST00000431352 U2AF1L4Q8WU68 220 aaKnown RBP17.03■□□□□ 0.32
SEC13-211ENST00000431352 COA7Q96BR5 231 aa17.03■□□□□ 0.32
SEC13-211ENST00000431352 AS3MTQ9HBK9 375 aa17.03■□□□□ 0.32
SEC13-211ENST00000431352 PI4KBQ9UBF8 816 aa17.03■□□□□ 0.32
SEC13-211ENST00000431352 DBNLQ9UJU6 430 aaKnown RBP17.03■□□□□ 0.32
SEC13-211ENST00000431352 FARP2O94887 1054 aaPredicted RBP17.02■□□□□ 0.32
SEC13-211ENST00000431352 GDF11O95390 407 aa17.02■□□□□ 0.32
SEC13-211ENST00000431352 DYNLL1P63167 89 aaKnown RBP17.02■□□□□ 0.32
SEC13-211ENST00000431352 PABPC4Q13310 644 aaKnown RBP eCLIP17.02■□□□□ 0.32
SEC13-211ENST00000431352 FAM110CQ1W6H9 321 aa17.02■□□□□ 0.32
SEC13-211ENST00000431352 ASCC2Q9H1I8 757 aaPredicted RBP17.02■□□□□ 0.32
SEC13-211ENST00000431352 DHX36Q9H2U1 1008 aaKnown RBP17.02■□□□□ 0.32
SEC13-211ENST00000431352 PALD1Q9ULE6 856 aa17.02■□□□□ 0.32
SEC13-211ENST00000431352 NDUFB9Q9Y6M9 179 aa17.02■□□□□ 0.32
SEC13-211ENST00000431352 IDH1O75874 414 aaKnown RBP17.01■□□□□ 0.31
SEC13-211ENST00000431352 JAG1P78504 1218 aa17.01■□□□□ 0.31
SEC13-211ENST00000431352 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
SEC13-211ENST00000431352 MIER1Q8N108 512 aa17.01■□□□□ 0.31
SEC13-211ENST00000431352 MIGA1Q8NAN2 632 aa17.01■□□□□ 0.31
SEC13-211ENST00000431352 DEFB118Q96PH6 123 aa17.01■□□□□ 0.31
SEC13-211ENST00000431352 TBC1D2Q9BYX2 928 aa17.01■□□□□ 0.31
SEC13-211ENST00000431352 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
SEC13-211ENST00000431352 MYO5AQ9Y4I1 1855 aaKnown RBP17.01■□□□□ 0.31
SEC13-211ENST00000431352 CYP7A1P22680 504 aa17■□□□□ 0.31
SEC13-211ENST00000431352 GCLCP48506 637 aaPredicted RBP17■□□□□ 0.31
SEC13-211ENST00000431352 FXR1P51114 621 aaKnown RBP eCLIP17■□□□□ 0.31
SEC13-211ENST00000431352 PPP4CP60510 307 aa17■□□□□ 0.31
SEC13-211ENST00000431352 IRX3P78415 501 aaPredicted RBP17■□□□□ 0.31
SEC13-211ENST00000431352 IRF5Q13568 498 aa17■□□□□ 0.31
SEC13-211ENST00000431352 EAF2Q96CJ1 260 aaPredicted RBP17■□□□□ 0.31
SEC13-211ENST00000431352 HTATIP2Q9BUP3 242 aa17■□□□□ 0.31
SEC13-211ENST00000431352 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
SEC13-211ENST00000431352 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
SEC13-211ENST00000431352 CDK5RAP2Q96SN8 1893 aa16.99■□□□□ 0.31
SEC13-211ENST00000431352 ZBTB7BO15156 539 aaPredicted RBP16.99■□□□□ 0.31
SEC13-211ENST00000431352 PEX10O60683 326 aa16.99■□□□□ 0.31
SEC13-211ENST00000431352 TFRCP02786 760 aaKnown RBP16.99■□□□□ 0.31
SEC13-211ENST00000431352 HLA-DOAP06340 250 aa16.99■□□□□ 0.31
SEC13-211ENST00000431352 ASNSP08243 561 aa16.99■□□□□ 0.31
SEC13-211ENST00000431352 MAGEB6Q8N7X4 407 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms