RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 POLKQ9UBT6 870 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 TMEM110-MUSTN1A8MSY1 372 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 CPLX1O14810 134 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 SNX2O60749 519 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 PARP1P09874 1014 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 MAGEA9P43362 315 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 MXI1P50539 228 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 NEK3P51956 506 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 TUBA1BP68363 451 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 TMF1P82094 1093 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 LRP8Q14114 963 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 TUBA1AQ71U36 451 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 CPXCR1Q8N123 301 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 TATDN2Q93075 761 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 JAKMIP2Q96AA8 810 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 SKA1Q96BD8 255 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 CTAGE1Q96RT6 745 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 API5Q9BZZ5 524 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 UBN1Q9NPG3 1134 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 MRPL40Q9NQ50 206 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 ZKSCAN5Q9Y2L8 839 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 MORC2Q9Y6X9 1032 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 EME2A4GXA9 379 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 GOLGA6L4A6NEF3 574 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 BHMG1C9JSJ3 638 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 SLC27A2O14975 620 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 TSPAN9O75954 239 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 HSPA8P11142 646 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 EPB42P16452 691 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 MRPS5P82675 430 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 SMAD4Q13485 552 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 IRGCQ6NXR0 463 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 ZNF354CQ86Y25 554 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 RTF1Q92541 710 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 NDEL1Q9GZM8 345 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 CLIC5Q9NZA1 410 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 LRRC72A6NJI9 287 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 GCFC2P16383 781 aaKnown RBP6.03□□□□□ -1.44
PTPN4-203ENST00000430976 HADHAP40939 763 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 UBXN2AP68543 259 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 MTX1Q13505 466 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 BBS9Q3SYG4 887 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 RILPL1Q5EBL4 403 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 CCDC25Q86WR0 208 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 BBOF1Q8ND07 529 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 FAM81AQ8TBF8 368 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 GTF3C6Q969F1 213 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 YIPF3Q9GZM5 350 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 SLC5A4Q9NY91 659 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 CCDC39Q9UFE4 941 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 MCM8Q9UJA3 840 aa6.03□□□□□ -1.44
PTPN4-203ENST00000430976 SPAG9O60271 1321 aaKnown RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 SFI1A8K8P3 1242 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 MTHFD1P11586 935 aaKnown RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 EPS15P42566 896 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 FBXW10Q5XX13 1052 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 PACS2Q86VP3 889 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 TRIML2Q8N7C3 387 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 PPM1NQ8N819 430 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 ZNF483Q8TF39 744 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 PBXIP1Q96AQ6 731 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 DESI2Q9BSY9 194 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 DRC3Q9H069 523 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 EPB41L4AQ9HCS5 686 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 ST7Q9NRC1 585 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 C9orf78Q9NZ63 289 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 PCDHGB7Q9Y5F8 929 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 GTPBP10A4D1E9 387 aaKnown RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 AP3B1O00203 1094 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 ZSCAN9O15535 394 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 TADA3O75528 432 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 SOX11P35716 441 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 GNALP38405 381 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 EVCP57679 992 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 SMUG1Q53HV7 270 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 C1orf228Q6PIY5 440 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 ATF7IPQ6VMQ6 1270 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 KRT27Q7Z3Y8 459 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 CCDC148Q8NFR7 591 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 LPIN2Q92539 896 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 TRIM63Q969Q1 353 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 ALKBH8Q96BT7 664 aaKnown RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 AGAP3Q96P47 875 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 ACBD3Q9H3P7 528 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 MAPK8IP1Q9UQF2 711 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 POTEFA5A3E0 1075 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 SEC24DO94855 1032 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 STAMBPO95630 424 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 GUCA1CO95843 209 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 LDHBP07195 334 aaKnown RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 TBC1D8BQ0IIM8 1120 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 ITGB3BPQ13352 177 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 THOC7Q6I9Y2 204 aaKnown RBP6.02□□□□□ -1.45
PTPN4-203ENST00000430976 ARHGAP22Q7Z5H3 698 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 OR8H2Q8N162 312 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 CDC26Q8NHZ8 85 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 E2F7Q96AV8 911 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 TBCBQ99426 244 aa6.02□□□□□ -1.45
PTPN4-203ENST00000430976 CCNCP24863 283 aa6.01□□□□□ -1.45
PTPN4-203ENST00000430976 CSE1LP55060 971 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms