RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 RASA3Q14644 834 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 SUPT20HL1Q3ZLR7 823 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 C12orf60Q5U649 245 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 CDC37L1Q7L3B6 337 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 KRT26Q7Z3Y9 468 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 CRACR2BQ8N4Y2 399 aaPredicted RBP10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 CSRNP1Q96S65 589 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 USP26Q9BXU7 913 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 DEFB129Q9H1M3 183 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 RRAGCQ9HB90 399 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 SERPINB13Q9UIV8 391 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 PCDHAC2Q9Y5I4 1007 aa10.6□□□□□ -0.71
COL6A4P2-201ENST00000430317 BAZ2AQ9UIF9 1905 aaKnown RBP10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 MINDY4BA8MYZ0 360 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 POTECB2RU33 542 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 FOXP2O15409 715 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 HMGB1P09429 215 aaKnown RBP10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 PSMA5P28066 241 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 HIRAP54198 1017 aaPredicted RBP10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 CACNB3P54284 484 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 NECTIN1Q15223 517 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 PPP4R3BQ5MIZ7 849 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 CREB3L3Q68CJ9 461 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 CTR9Q6PD62 1173 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 MFSD6Q6ZSS7 791 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 RALYLQ86SE5 291 aaKnown RBP10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 ZNF526Q8TF50 670 aaPredicted RBP10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 C22orf23Q9BZE7 217 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 KRT23Q9C075 422 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 DDX4Q9NQI0 724 aaKnown RBP10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 CNTNAP1P78357 1384 aa10.59□□□□□ -0.71
COL6A4P2-201ENST00000430317 POTEB2H3BUK9 544 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 SLC27A2O14975 620 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 TBC1D12O60347 775 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 YY1P25490 414 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 RBM25P49756 843 aaKnown RBP10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 TSGA10IPQ3SY00 556 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 AKNAD1Q5T1N1 836 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 STAG1Q8WVM7 1258 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 DCBLD2Q96PD2 775 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 NMRK2Q9NPI5 230 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 PALD1Q9ULE6 856 aa10.58□□□□□ -0.72
COL6A4P2-201ENST00000430317 ORC4O43929 436 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 PPP1R12BO60237 982 aaPredicted RBP10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 CYP21A2P08686 494 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 KCNA4P22459 653 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 C16orf86Q6ZW13 317 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 NCOA7Q8NI08 942 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 ESR2Q92731 530 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 KCNB2Q92953 911 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 CCDC17Q96LX7 622 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 TBC1D32Q96NH3 1257 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 TMEM39BQ9GZU3 492 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 MKNK2Q9HBH9 465 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 GINM1Q9NU53 330 aa10.57□□□□□ -0.72
COL6A4P2-201ENST00000430317 DDTLA6NHG4 134 aaPredicted RBP10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 CLCN6P51797 869 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 HAND2P61296 217 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 GABPAQ06546 454 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 SART3Q15020 963 aaKnown RBP10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 CCDC178Q5BJE1 867 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 METTL16Q86W50 562 aaKnown RBP10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 IL17RAQ96F46 866 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 MTA3Q9BTC8 594 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 ZNF341Q9BYN7 854 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 TOMM22Q9NS69 142 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 MYH8P13535 1937 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 ASTN2O75129 1339 aaPredicted RBP10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 WDR19Q8NEZ3 1342 aa10.56□□□□□ -0.72
COL6A4P2-201ENST00000430317 UNCXA6NJT0 531 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 E7EWF7 191 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 SEC24BO95487 1268 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 FGRP09769 529 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 PLCD1P51178 756 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 FKBP1BP68106 108 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 BLOC1S2Q6QNY1 142 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 IQCA1Q86XH1 822 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 ZNF444Q8N0Y2 327 aaPredicted RBP10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 TEPSINQ96N21 525 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 NEK1Q96PY6 1258 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
COL6A4P2-201ENST00000430317 PLIN4Q96Q06 1357 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 SIPA1L1O43166 1804 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 CYP2D7A0A087X1C5 515 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 ERICH2A1L162 156 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 TSPY2A6NKD2 308 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 TSPY3P0CV98 308 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 TSPY8P0CW00 308 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 CYP2D6P10635 497 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 MCM5P33992 734 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 IREB2P48200 963 aaKnown RBP10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 CDK8P49336 464 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 MAP3K10Q02779 954 aa10.54□□□□□ -0.72
COL6A4P2-201ENST00000430317 CTDSPL2Q05D32 466 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms