RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 ZNF500O60304 480 aaPredicted RBP18.81■□□□□ 0.6
MBD4-203ENST00000429544 ZNF165P49910 485 aa18.81■□□□□ 0.6
MBD4-203ENST00000429544 TRIM22Q8IYM9 498 aa18.81■□□□□ 0.6
MBD4-203ENST00000429544 WASF1Q92558 559 aa18.81■□□□□ 0.6
MBD4-203ENST00000429544 CRNKL1Q9BZJ0 848 aaKnown RBP18.81■□□□□ 0.6
MBD4-203ENST00000429544 USP17L12C9JPN9 530 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 USP17L21D6R901 530 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 ADRA2BP18089 450 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 EVX2Q03828 476 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 PRR5LQ6MZQ0 368 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 CERKQ8TCT0 537 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 KIAA1551Q9HCM1 1747 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 STX1AQ16623 288 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 ENAHQ8N8S7 591 aaPredicted RBP18.8■□□□□ 0.6
MBD4-203ENST00000429544 FANCBQ8NB91 859 aa18.8■□□□□ 0.6
MBD4-203ENST00000429544 ZSCAN10Q96SZ4 725 aaPredicted RBP18.8■□□□□ 0.6
MBD4-203ENST00000429544 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.8■□□□□ 0.6
MBD4-203ENST00000429544 CCDC196A0A1B0GTZ2 297 aa18.79■□□□□ 0.6
MBD4-203ENST00000429544 U2AF2P26368 475 aaKnown RBP eCLIP18.79■□□□□ 0.66e-12■■■□□ 15.8
MBD4-203ENST00000429544 MARCKSP29966 332 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 RCAN1P53805 252 aa18.79■□□□□ 0.6
MBD4-203ENST00000429544 C11orf57Q6ZUT1 292 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 NBPF11Q86T75 865 aa18.79■□□□□ 0.6
MBD4-203ENST00000429544 DZIP1Q86YF9 867 aaKnown RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 NAP1L5Q96NT1 182 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 SLC39A14Q15043 492 aa18.79■□□□□ 0.6
MBD4-203ENST00000429544 AXDND1Q5T1B0 1012 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 CRACR2BQ8N4Y2 399 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 TDRD7Q8NHU6 1098 aaKnown RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 ERCC4Q92889 916 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 ZNF830Q96NB3 372 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 GPR101Q96P66 508 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 DCP1AQ9NPI6 582 aaPredicted RBP18.79■□□□□ 0.6
MBD4-203ENST00000429544 MROH7-TTC4A0A0A0MT08 1334 aa18.78■□□□□ 0.6
MBD4-203ENST00000429544 A0A087WWV3 80 aa18.78■□□□□ 0.6
MBD4-203ENST00000429544 RPGRQ92834 1020 aaKnown RBP18.78■□□□□ 0.6
MBD4-203ENST00000429544 KCNJ14Q9UNX9 436 aa18.78■□□□□ 0.6
MBD4-203ENST00000429544 LEMD3Q9Y2U8 911 aa18.78■□□□□ 0.6
MBD4-203ENST00000429544 BRWD3Q6RI45 1802 aa18.78■□□□□ 0.6
MBD4-203ENST00000429544 XDHP47989 1333 aa18.78■□□□□ 0.6
MBD4-203ENST00000429544 WDHD1O75717 1129 aaPredicted RBP18.78■□□□□ 0.6
MBD4-203ENST00000429544 GYS1P13807 737 aa18.78■□□□□ 0.6
MBD4-203ENST00000429544 SPTY2D1Q68D10 685 aaPredicted RBP18.78■□□□□ 0.6
MBD4-203ENST00000429544 SDF4Q9BRK5 362 aa18.78■□□□□ 0.6
MBD4-203ENST00000429544 DEXIO95424 95 aa18.77■□□□□ 0.6
MBD4-203ENST00000429544 MMP1P03956 469 aa18.77■□□□□ 0.6
MBD4-203ENST00000429544 CYP2D6P10635 497 aa18.77■□□□□ 0.6
MBD4-203ENST00000429544 IFIT1BQ5T764 474 aaKnown RBP18.77■□□□□ 0.6
MBD4-203ENST00000429544 SPC24Q8NBT2 197 aa18.77■□□□□ 0.6
MBD4-203ENST00000429544 QTRT2Q9H974 415 aaKnown RBP18.77■□□□□ 0.6
MBD4-203ENST00000429544 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.77■□□□□ 0.6
MBD4-203ENST00000429544 FGRP09769 529 aa18.77■□□□□ 0.59
MBD4-203ENST00000429544 PCP11498 1178 aaKnown RBP18.77■□□□□ 0.59
MBD4-203ENST00000429544 PTPAQ15257 358 aa18.77■□□□□ 0.59
MBD4-203ENST00000429544 IQCA1Q86XH1 822 aa18.77■□□□□ 0.59
MBD4-203ENST00000429544 MAP3K14Q99558 947 aa18.77■□□□□ 0.59
MBD4-203ENST00000429544 ATP8A2Q9NTI2 1148 aa18.77■□□□□ 0.59
MBD4-203ENST00000429544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.77■□□□□ 0.59
MBD4-203ENST00000429544 BTBD18B2RXH4 712 aa18.76■□□□□ 0.59
MBD4-203ENST00000429544 CAVIN2O95810 425 aa18.76■□□□□ 0.59
MBD4-203ENST00000429544 PFKFB1P16118 471 aa18.76■□□□□ 0.59
MBD4-203ENST00000429544 CMA1P23946 247 aa18.76■□□□□ 0.59
MBD4-203ENST00000429544 SAFBQ15424 915 aaKnown RBP eCLIP18.76■□□□□ 0.59
MBD4-203ENST00000429544 DIS3L2Q8IYB7 885 aaKnown RBP18.76■□□□□ 0.59
MBD4-203ENST00000429544 TTC12Q9H892 705 aaPredicted RBP18.76■□□□□ 0.59
MBD4-203ENST00000429544 LDHBP07195 334 aaKnown RBP18.76■□□□□ 0.59
MBD4-203ENST00000429544 ST5P78524 1137 aa18.76■□□□□ 0.59
MBD4-203ENST00000429544 NOSTRINQ8IVI9 506 aa18.76■□□□□ 0.59
MBD4-203ENST00000429544 SERPINB2P05120 415 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 GPSM2P81274 684 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 ZNF804AQ7Z570 1209 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 CATIPQ7Z7H3 387 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 WDR66Q8TBY9 1149 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 ANO10Q9NW15 660 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 ARPP21Q9UBL0 812 aaPredicted RBP18.75■□□□□ 0.59
MBD4-203ENST00000429544 EP400Q96L91 3159 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 ORC4O43929 436 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 PPP6R2O75170 966 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 OFD1O75665 1012 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 ZNF202O95125 648 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 IQCB1Q15051 598 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 SLC4A8Q2Y0W8 1093 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 JMYQ8N9B5 988 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 FBXW7Q969H0 707 aa18.75■□□□□ 0.59
MBD4-203ENST00000429544 ZBTB22O15209 634 aa18.74■□□□□ 0.59
MBD4-203ENST00000429544 FAM47AQ5JRC9 791 aa18.74■□□□□ 0.59
MBD4-203ENST00000429544 TRIM37O94972 964 aa18.74■□□□□ 0.59
MBD4-203ENST00000429544 SLC3A2P08195 630 aaKnown RBP18.74■□□□□ 0.59
MBD4-203ENST00000429544 KIAA2012Q0VF49 1180 aa18.74■□□□□ 0.59
MBD4-203ENST00000429544 GRIK5Q16478 980 aa18.74■□□□□ 0.59
MBD4-203ENST00000429544 TMED8Q6PL24 325 aaPredicted RBP18.74■□□□□ 0.59
MBD4-203ENST00000429544 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
MBD4-203ENST00000429544 RNF26Q9BY78 433 aaPredicted RBP18.74■□□□□ 0.59
MBD4-203ENST00000429544 TRIM5Q9C035 493 aa18.74■□□□□ 0.59
MBD4-203ENST00000429544 GOLGA6L19H0YKK7 550 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 NMT2O60551 498 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 UFL1O94874 794 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 PLEKHA8P1O95397 391 aa18.73■□□□□ 0.59
MBD4-203ENST00000429544 AKAP17AQ02040 695 aaKnown RBP18.73■□□□□ 0.59
MBD4-203ENST00000429544 CRY2Q49AN0 593 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms