RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 TREML2Q5T2D2 321 aa16.06■□□□□ 0.16
PCCA-206ENST00000428969 ZNF280CQ8ND82 737 aa16.06■□□□□ 0.16
PCCA-206ENST00000428969 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
PCCA-206ENST00000428969 TAOK2Q9UL54 1235 aa16.06■□□□□ 0.16
PCCA-206ENST00000428969 CUL9Q8IWT3 2517 aa16.06■□□□□ 0.16
PCCA-206ENST00000428969 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
PCCA-206ENST00000428969 TIMM10P62072 90 aa16.05■□□□□ 0.16
PCCA-206ENST00000428969 SPP2Q13103 211 aa16.05■□□□□ 0.16
PCCA-206ENST00000428969 GPR153Q6NV75 609 aa16.05■□□□□ 0.16
PCCA-206ENST00000428969 XAGE2Q96GT9 111 aa16.05■□□□□ 0.16
PCCA-206ENST00000428969 ALPK3Q96L96 1907 aa16.04■□□□□ 0.16
PCCA-206ENST00000428969 RPTORQ8N122 1335 aa16.04■□□□□ 0.16
PCCA-206ENST00000428969 BMP8BP34820 402 aa16.04■□□□□ 0.16
PCCA-206ENST00000428969 CAP2P40123 477 aa16.04■□□□□ 0.16
PCCA-206ENST00000428969 SH3D19Q5HYK7 790 aa16.04■□□□□ 0.16
PCCA-206ENST00000428969 AS3MTQ9HBK9 375 aa16.04■□□□□ 0.16
PCCA-206ENST00000428969 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.04■□□□□ 0.16
PCCA-206ENST00000428969 HERC5Q9UII4 1024 aaKnown RBP16.04■□□□□ 0.16
PCCA-206ENST00000428969 NOB1Q9ULX3 412 aaKnown RBP16.04■□□□□ 0.16
PCCA-206ENST00000428969 COL6A3P12111 3177 aa16.04■□□□□ 0.16
PCCA-206ENST00000428969 ATAD5Q96QE3 1844 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 SLURP2P0DP57 97 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 MTX1Q13505 466 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 CCDC84Q86UT8 332 aaPredicted RBP16.03■□□□□ 0.16
PCCA-206ENST00000428969 SPATA5Q8NB90 893 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 ZNF384Q8TF68 577 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 NSUN4Q96CB9 384 aaKnown RBP16.03■□□□□ 0.16
PCCA-206ENST00000428969 GDF15Q99988 308 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 HMX1Q9NP08 348 aaPredicted RBP16.03■□□□□ 0.16
PCCA-206ENST00000428969 MORF4L1Q9UBU8 362 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 STAP2Q9UGK3 403 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 GJD2Q9UKL4 321 aa16.03■□□□□ 0.16
PCCA-206ENST00000428969 SOX1O00570 391 aaPredicted RBP16.02■□□□□ 0.16
PCCA-206ENST00000428969 SRGAP3O43295 1099 aa16.02■□□□□ 0.16
PCCA-206ENST00000428969 GNAI3P08754 354 aa16.02■□□□□ 0.16
PCCA-206ENST00000428969 HMGCS2P54868 508 aa16.02■□□□□ 0.16
PCCA-206ENST00000428969 TFCP2Q12800 502 aa16.02■□□□□ 0.16
PCCA-206ENST00000428969 TRMT2AQ8IZ69 625 aaKnown RBP16.02■□□□□ 0.16
PCCA-206ENST00000428969 DIS3LQ8TF46 1054 aaKnown RBP16.02■□□□□ 0.16
PCCA-206ENST00000428969 MEIS3Q99687 375 aa16.02■□□□□ 0.16
PCCA-206ENST00000428969 NBPF3Q9H094 633 aa16.02■□□□□ 0.16
PCCA-206ENST00000428969 ASCC2Q9H1I8 757 aaPredicted RBP16.02■□□□□ 0.16
PCCA-206ENST00000428969 HMG20BQ9P0W2 317 aa16.02■□□□□ 0.16
PCCA-206ENST00000428969 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
PCCA-206ENST00000428969 ARID4AP29374 1257 aaPredicted RBP16.01■□□□□ 0.15
PCCA-206ENST00000428969 WDR18Q9BV38 432 aa16.01■□□□□ 0.15
PCCA-206ENST00000428969 DHX36Q9H2U1 1008 aaKnown RBP16.01■□□□□ 0.15
PCCA-206ENST00000428969 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
PCCA-206ENST00000428969 ASNSP08243 561 aa16■□□□□ 0.15
PCCA-206ENST00000428969 XRCC5P13010 732 aaKnown RBP16■□□□□ 0.15
PCCA-206ENST00000428969 HOXA7P31268 230 aaPredicted RBP16■□□□□ 0.15
PCCA-206ENST00000428969 IRX3P78415 501 aaPredicted RBP16■□□□□ 0.15
PCCA-206ENST00000428969 GORABQ5T7V8 394 aa16■□□□□ 0.15
PCCA-206ENST00000428969 TEX11Q8IYF3 940 aa16■□□□□ 0.15
PCCA-206ENST00000428969 TRMT44Q8IYL2 757 aaKnown RBP16■□□□□ 0.15
PCCA-206ENST00000428969 SOCS4Q8WXH5 440 aa16■□□□□ 0.15
PCCA-206ENST00000428969 ARHGAP45Q92619 1136 aa16■□□□□ 0.15
PCCA-206ENST00000428969 LRCH3Q96II8 777 aa16■□□□□ 0.15
PCCA-206ENST00000428969 NEUROD6Q96NK8 337 aa16■□□□□ 0.15
PCCA-206ENST00000428969 GINM1Q9NU53 330 aa16■□□□□ 0.15
PCCA-206ENST00000428969 OGDHLQ9ULD0 1010 aa16■□□□□ 0.15
PCCA-206ENST00000428969 A0A0C4DFX4 3053 aa16■□□□□ 0.15
PCCA-206ENST00000428969 DLL1O00548 723 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 UQCRFS1P1P0C7P4 283 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 PLCG2P16885 1265 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 BACE1P56817 501 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 C7orf61Q8IZ16 206 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 CDCA7LQ96GN5 454 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 NOL10Q9BSC4 688 aaKnown RBP15.99■□□□□ 0.15
PCCA-206ENST00000428969 C11orf49Q9H6J7 331 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 TMOD4Q9NZQ9 345 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 RAI14Q9P0K7 980 aa15.99■□□□□ 0.15
PCCA-206ENST00000428969 PLXNB2O15031 1838 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 C19orf81C9J6K1 198 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 IGSF3O75054 1194 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 BAG3O95817 575 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 LRIT3Q3SXY7 679 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 DDX60LQ5H9U9 1706 aaKnown RBP15.98■□□□□ 0.15
PCCA-206ENST00000428969 MAP3K21Q5TCX8 1036 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 GTF3C2Q8WUA4 911 aaPredicted RBP15.98■□□□□ 0.15
PCCA-206ENST00000428969 TRIB2Q92519 343 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 NUDT12Q9BQG2 462 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 LRP2BPQ9P2M1 347 aa15.98■□□□□ 0.15
PCCA-206ENST00000428969 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
PCCA-206ENST00000428969 MTMR2Q13614 643 aa15.97■□□□□ 0.15
PCCA-206ENST00000428969 RRP1BQ14684 758 aaKnown RBP15.97■□□□□ 0.15
PCCA-206ENST00000428969 PI16Q6UXB8 463 aa15.97■□□□□ 0.15
PCCA-206ENST00000428969 TBC1D9Q6ZT07 1266 aa15.97■□□□□ 0.15
PCCA-206ENST00000428969 METTL16Q86W50 562 aaKnown RBP15.97■□□□□ 0.15
PCCA-206ENST00000428969 GPRC5AQ8NFJ5 357 aa15.97■□□□□ 0.15
PCCA-206ENST00000428969 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
PCCA-206ENST00000428969 MAPK4P31152 587 aa15.96■□□□□ 0.15
PCCA-206ENST00000428969 MCAMP43121 646 aa15.96■□□□□ 0.15
PCCA-206ENST00000428969 TRIM32Q13049 653 aa15.96■□□□□ 0.15
PCCA-206ENST00000428969 PDE3AQ14432 1141 aa15.96■□□□□ 0.15
PCCA-206ENST00000428969 FOXP4Q8IVH2 680 aaPredicted RBP15.96■□□□□ 0.15
PCCA-206ENST00000428969 TDHQ8IZJ6 230 aa15.96■□□□□ 0.15
PCCA-206ENST00000428969 SH3RF3Q8TEJ3 882 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms