RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 HOMER1Q86YM7 354 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 TMEM87BQ96K49 555 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 CLIC6Q96NY7 704 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 UTP14AQ9BVJ6 771 aaKnown RBP10.12□□□□□ -0.79
CDH13-202ENST00000428848 SENP2Q9HC62 589 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 FANCLQ9NW38 375 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 THRAP3Q9Y2W1 955 aaKnown RBP10.12□□□□□ -0.79
CDH13-202ENST00000428848 PCDHA5Q9Y5H7 936 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 TOGARAM1Q9Y4F4 1720 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 NID2Q14112 1375 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 TOP1P11387 765 aaKnown RBP10.11□□□□□ -0.79
CDH13-202ENST00000428848 ZNF18P17022 549 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 SARSP49591 514 aaKnown RBP10.11□□□□□ -0.79
CDH13-202ENST00000428848 TRDNQ13061 729 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 CFAP100Q494V2 611 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 CCDC102BQ68D86 513 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 ZBTB38Q8NAP3 1195 aaPredicted RBP10.11□□□□□ -0.79
CDH13-202ENST00000428848 UBXN4Q92575 508 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 MPHOSPH8Q99549 860 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 KCNH3Q9ULD8 1083 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 UBN2Q6ZU65 1347 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 DOCK2Q92608 1830 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 ZSCAN12O43309 604 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 GPS2Q13227 327 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 ALX1Q15699 326 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 OLFM4Q6UX06 510 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 CNPY4Q8N129 248 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 PIGBQ92521 554 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 PHKBQ93100 1093 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDH13-202ENST00000428848 LY9Q9HBG7 655 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 ARGLU1Q9NWB6 273 aaPredicted RBP10.11□□□□□ -0.79
CDH13-202ENST00000428848 CWC15Q9P013 229 aaKnown RBP10.11□□□□□ -0.79
CDH13-202ENST00000428848 PPP2R2CQ9Y2T4 447 aa10.11□□□□□ -0.79
CDH13-202ENST00000428848 TIAM2Q8IVF5 1701 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 WNK3Q9BYP7 1800 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 TPM1P09493 284 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 LIFRP42702 1097 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 MAP3K9P80192 1104 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 GOLGA8FQ08AF8 430 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 GOLGA8DPQ0D2H9 430 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 IFIT5Q13325 482 aaKnown RBP10.1□□□□□ -0.79
CDH13-202ENST00000428848 MAPK8IP2Q13387 824 aaPredicted RBP10.1□□□□□ -0.79
CDH13-202ENST00000428848 CPLX2Q6PUV4 134 aaKnown RBP10.1□□□□□ -0.79
CDH13-202ENST00000428848 GIGYF2Q6Y7W6 1299 aaKnown RBP10.1□□□□□ -0.79
CDH13-202ENST00000428848 STK11IPQ8N1F8 1099 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 VGLL2Q8N8G2 317 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 TC2NQ8N9U0 490 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 CNNM3Q8NE01 707 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 UPF1Q92900 1129 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDH13-202ENST00000428848 CDHR2Q9BYE9 1310 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 ARAP2Q8WZ64 1704 aa10.1□□□□□ -0.79
CDH13-202ENST00000428848 TCRBV5S4A2TA0A5A2 114 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 GOLGA6L9A6NEM1 432 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 B4E1Z4 1266 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 FOXN1O15353 648 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 ZBTB43O43298 467 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 STX10O60499 249 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 RXRAP19793 462 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 IARSP41252 1262 aaKnown RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 TOB1P50616 345 aaPredicted RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 TTF1Q15361 905 aaPredicted RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 RSRC2Q7L4I2 434 aaKnown RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 KRI1Q8N9T8 703 aaKnown RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 ENOX1Q8TC92 643 aaKnown RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 AK7Q96M32 723 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 CARD6Q9BX69 1037 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 PIH1D3Q9NQM4 214 aaKnown RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 USP21Q9UK80 565 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 MAN1B1Q9UKM7 699 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 ZNF330Q9Y3S2 320 aaPredicted RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 DISP2A7MBM2 1401 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 ERVV-1B6SEH8 477 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 URI1O94763 535 aaPredicted RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 PTPREP23469 700 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 NOP2P46087 812 aaKnown RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 MORC3Q14149 939 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 SLC9C2Q5TAH2 1124 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 TMCO3Q6UWJ1 677 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 DNAJC10Q8IXB1 793 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 MED15Q96RN5 788 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 RSPH14Q9UHP6 348 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 FBXO2Q9UK22 296 aaPredicted RBP10.09□□□□□ -0.79
CDH13-202ENST00000428848 ASAP1Q9ULH1 1129 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 BCL9O00512 1426 aa10.09□□□□□ -0.79
CDH13-202ENST00000428848 ANKRD36CQ5JPF3 1778 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 MYH6P13533 1939 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 GOLGA8AA7E2F4 631 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 UBE2Q2LH0YL09 131 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
CDH13-202ENST00000428848 IFNAR1P17181 557 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 ARID4AP29374 1257 aaPredicted RBP10.08□□□□□ -0.8
CDH13-202ENST00000428848 FMR1Q06787 632 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDH13-202ENST00000428848 PTPN21Q16825 1174 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 MICU3Q86XE3 530 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 NOSTRINQ8IVI9 506 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 MLKLQ8NB16 471 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 MNS1Q8NEH6 495 aa10.08□□□□□ -0.8
CDH13-202ENST00000428848 TTLL11Q8NHH1 800 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms