RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 TPCN1Q9ULQ1 816 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 NAV1Q8NEY1 1877 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 POTECB2RU33 542 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 KIF4BQ2VIQ3 1234 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 CHAMP1Q96JM3 812 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 TTC14Q96N46 770 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 NACAP1Q9BZK3 213 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 OSBPL5Q9H0X9 879 aaPredicted RBP11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 PDRG1Q9NUG6 133 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
HMGCLL1-206ENST00000428842 DDX60LQ5H9U9 1706 aaKnown RBP11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 CCT2P78371 535 aaKnown RBP11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 ST3GAL1Q11201 340 aa11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 DGKZQ13574 1117 aa11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 NFKBIBQ15653 356 aa11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 C12orf60Q5U649 245 aa11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 CCDC82Q8N4S0 544 aa11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 ZSWIM6Q9HCJ5 1215 aa11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 GGA3Q9NZ52 723 aa11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 DAXXQ9UER7 740 aaPredicted RBP11.27□□□□□ -0.6
HMGCLL1-206ENST00000428842 PRC1O43663 620 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 RPS6KB1P23443 525 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 FOSBP53539 338 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 AKNAD1Q5T1N1 836 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 FOXD4L5Q5VV16 416 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 GPC2Q8N158 579 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 AGBL3Q8NEM8 1001 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 FOXD4L4Q8WXT5 416 aaPredicted RBP11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 BRPF3Q9ULD4 1205 aa11.27□□□□□ -0.61
HMGCLL1-206ENST00000428842 ADM5C9JUS6 153 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 SIPA1L1O43166 1804 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 FGD1P98174 961 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 RASA3Q14644 834 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 ME3Q16798 604 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 RNF20Q5VTR2 975 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 MOB2Q70IA6 237 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 KCNB2Q92953 911 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 CPVLQ9H3G5 476 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 CYP46A1Q9Y6A2 500 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 GNAT2P19087 354 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 PKP1Q13835 747 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 NBPF12Q5TAG4 269 aaPredicted RBP11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 ATP8A2Q9NTI2 1148 aa11.26□□□□□ -0.61
HMGCLL1-206ENST00000428842 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 AKR1B1P15121 316 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 CDK8P49336 464 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 RABEP1Q15276 862 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 TMX3Q96JJ7 454 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 HDAC9Q9UKV0 1011 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 FOCADQ5VW36 1801 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 RAD21O60216 631 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 TFAP4Q01664 338 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 EXOSC10Q01780 885 aaKnown RBP11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 RALYLQ86SE5 291 aaKnown RBP11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 CCDC83Q8IWF9 413 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 PIBF1Q8WXW3 757 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 RRAGCQ9HB90 399 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 CTNNA3Q9UI47 895 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 SUGT1Q9Y2Z0 365 aa11.25□□□□□ -0.61
HMGCLL1-206ENST00000428842 TRAF5O00463 557 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 MPHOSPH10O00566 681 aaKnown RBP11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 RASA1P20936 1047 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 ZNF280AP59817 542 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 ATP2B2Q01814 1243 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 ALX1Q15699 326 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 SLF2Q8IX21 1173 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 ZBED3Q96IU2 234 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 DEFB129Q9H1M3 183 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 GJB4Q9NTQ9 266 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 H7C1D1 291 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 SHMT1P34896 483 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 FKBP1AP62942 108 aaKnown RBP11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 DHX32Q7L7V1 743 aaKnown RBP11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 NCOA7Q8NI08 942 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 VPS33BQ9H267 617 aa11.24□□□□□ -0.61
HMGCLL1-206ENST00000428842 LAMB1P07942 1786 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 MYO3BQ8WXR4 1341 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 JAK2O60674 1132 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 ANAPC15P60006 121 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 MICU3Q86XE3 530 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 CRACR2BQ8N4Y2 399 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 STAG1Q8WVM7 1258 aa11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 ARPP21Q9UBL0 812 aaPredicted RBP11.23□□□□□ -0.61
HMGCLL1-206ENST00000428842 STX8Q9UNK0 236 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1287.9 ms