RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CEP85Q6P2H3 762 aa19.07■□□□□ 0.64
SEC13-210ENST00000428626 NBPF11Q86T75 865 aa19.07■□□□□ 0.64
SEC13-210ENST00000428626 TEX11Q8IYF3 940 aa19.07■□□□□ 0.64
SEC13-210ENST00000428626 PANK1Q8TE04 598 aa19.07■□□□□ 0.64
SEC13-210ENST00000428626 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
SEC13-210ENST00000428626 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.07■□□□□ 0.64
SEC13-210ENST00000428626 AATFQ9NY61 560 aaKnown RBP eCLIP19.07■□□□□ 0.64
SEC13-210ENST00000428626 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
SEC13-210ENST00000428626 MAP4K4O95819 1239 aaPredicted RBP19.06■□□□□ 0.64
SEC13-210ENST00000428626 JAG1P78504 1218 aa19.06■□□□□ 0.64
SEC13-210ENST00000428626 CCDC158Q5M9N0 1113 aa19.06■□□□□ 0.64
SEC13-210ENST00000428626 TREML2Q5T2D2 321 aa19.06■□□□□ 0.64
SEC13-210ENST00000428626 NAA16Q6N069 864 aaPredicted RBP19.06■□□□□ 0.64
SEC13-210ENST00000428626 FASTKD5Q7L8L6 764 aaKnown RBP19.06■□□□□ 0.64
SEC13-210ENST00000428626 ZNF512BQ96KM6 892 aaPredicted RBP19.06■□□□□ 0.64
SEC13-210ENST00000428626 TMEM106CQ9BVX2 250 aa19.06■□□□□ 0.64
SEC13-210ENST00000428626 FOCADQ5VW36 1801 aa19.05■□□□□ 0.64
SEC13-210ENST00000428626 FMNL1O95466 1100 aaPredicted RBP19.05■□□□□ 0.64
SEC13-210ENST00000428626 PRMT2P55345 433 aa19.05■□□□□ 0.64
SEC13-210ENST00000428626 SHROOM1Q2M3G4 852 aaPredicted RBP19.05■□□□□ 0.64
SEC13-210ENST00000428626 DNAJC18Q9H819 358 aa19.05■□□□□ 0.64
SEC13-210ENST00000428626 GABRQQ9UN88 632 aa19.05■□□□□ 0.64
SEC13-210ENST00000428626 NDUFB9Q9Y6M9 179 aa19.05■□□□□ 0.64
SEC13-210ENST00000428626 PPP4CP60510 307 aa19.04■□□□□ 0.64
SEC13-210ENST00000428626 PRKCZQ05513 592 aa19.04■□□□□ 0.64
SEC13-210ENST00000428626 SLC4A8Q2Y0W8 1093 aa19.04■□□□□ 0.64
SEC13-210ENST00000428626 DOCK3Q8IZD9 2030 aa19.04■□□□□ 0.64
SEC13-210ENST00000428626 TGFBRAP1Q8WUH2 860 aa19.04■□□□□ 0.64
SEC13-210ENST00000428626 SLC45A1Q9Y2W3 748 aa19.04■□□□□ 0.64
SEC13-210ENST00000428626 LOC285556D6RIA3 1793 aa19.04■□□□□ 0.64
SEC13-210ENST00000428626 CEP290O15078 2479 aa19.03■□□□□ 0.64
SEC13-210ENST00000428626 MYPNQ86TC9 1320 aa19.03■□□□□ 0.64
SEC13-210ENST00000428626 CAP2P40123 477 aa19.03■□□□□ 0.64
SEC13-210ENST00000428626 DYNLL1P63167 89 aaKnown RBP19.03■□□□□ 0.64
SEC13-210ENST00000428626 SPP2Q13103 211 aa19.03■□□□□ 0.64
SEC13-210ENST00000428626 MAPKAPK5Q8IW41 473 aa19.03■□□□□ 0.64
SEC13-210ENST00000428626 SHISA4Q96DD7 197 aa19.03■□□□□ 0.64
SEC13-210ENST00000428626 AGTPBP1Q9UPW5 1226 aa19.03■□□□□ 0.64
SEC13-210ENST00000428626 EXOC6BQ9Y2D4 811 aa19.03■□□□□ 0.64
SEC13-210ENST00000428626 FLT1P17948 1338 aa19.02■□□□□ 0.64
SEC13-210ENST00000428626 GRK4P32298 578 aa19.02■□□□□ 0.64
SEC13-210ENST00000428626 ANTXR1Q9H6X2 564 aa19.02■□□□□ 0.64
SEC13-210ENST00000428626 FCGRTP55899 365 aa19.01■□□□□ 0.63
SEC13-210ENST00000428626 ZNF280CQ8ND82 737 aa19.01■□□□□ 0.63
SEC13-210ENST00000428626 RAET1EQ8TD07 263 aa19.01■□□□□ 0.63
SEC13-210ENST00000428626 PI4KBQ9UBF8 816 aa19.01■□□□□ 0.63
SEC13-210ENST00000428626 HERC5Q9UII4 1024 aaKnown RBP19.01■□□□□ 0.63
SEC13-210ENST00000428626 PALD1Q9ULE6 856 aa19.01■□□□□ 0.63
SEC13-210ENST00000428626 BAG3O95817 575 aa19■□□□□ 0.63
SEC13-210ENST00000428626 HOXD10P28358 340 aa19■□□□□ 0.63
SEC13-210ENST00000428626 HMGCS2P54868 508 aa19■□□□□ 0.63
SEC13-210ENST00000428626 METTL16Q86W50 562 aaKnown RBP19■□□□□ 0.63
SEC13-210ENST00000428626 USP17L5A8MUK1 530 aa18.99■□□□□ 0.63
SEC13-210ENST00000428626 CYP7A1P22680 504 aa18.99■□□□□ 0.63
SEC13-210ENST00000428626 ANKRD13CQ8N6S4 541 aa18.99■□□□□ 0.63
SEC13-210ENST00000428626 PROCA1Q8NCQ7 364 aaPredicted RBP18.99■□□□□ 0.63
SEC13-210ENST00000428626 SMCR8Q8TEV9 937 aaPredicted RBP18.99■□□□□ 0.63
SEC13-210ENST00000428626 NOL10Q9BSC4 688 aaKnown RBP18.99■□□□□ 0.63
SEC13-210ENST00000428626 DHX36Q9H2U1 1008 aaKnown RBP18.99■□□□□ 0.63
SEC13-210ENST00000428626 SAP30BPQ9UHR5 308 aaKnown RBP18.99■□□□□ 0.63
SEC13-210ENST00000428626 IDH1O75874 414 aaKnown RBP18.98■□□□□ 0.63
SEC13-210ENST00000428626 CCL5P13501 91 aa18.98■□□□□ 0.63
SEC13-210ENST00000428626 PLCG2P16885 1265 aa18.98■□□□□ 0.63
SEC13-210ENST00000428626 FLT3LGP49771 235 aa18.98■□□□□ 0.63
SEC13-210ENST00000428626 SH3D19Q5HYK7 790 aa18.98■□□□□ 0.63
SEC13-210ENST00000428626 MIGA1Q8NAN2 632 aa18.98■□□□□ 0.63
SEC13-210ENST00000428626 IL1RAPL2Q9NP60 686 aa18.98■□□□□ 0.63
SEC13-210ENST00000428626 GDF11O95390 407 aa18.97■□□□□ 0.63
SEC13-210ENST00000428626 AACSQ86V21 672 aa18.97■□□□□ 0.63
SEC13-210ENST00000428626 SIRT2Q8IXJ6 389 aa18.97■□□□□ 0.63
SEC13-210ENST00000428626 MAGEB6Q8N7X4 407 aa18.97■□□□□ 0.63
SEC13-210ENST00000428626 MYH1P12882 1939 aa18.96■□□□□ 0.63
SEC13-210ENST00000428626 TNPO2O14787 897 aaKnown RBP18.96■□□□□ 0.63
SEC13-210ENST00000428626 PEX10O60683 326 aa18.96■□□□□ 0.63
SEC13-210ENST00000428626 ELNP15502 786 aa18.96■□□□□ 0.63
SEC13-210ENST00000428626 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
SEC13-210ENST00000428626 RHPN1Q8TCX5 695 aa18.96■□□□□ 0.63
SEC13-210ENST00000428626 WDR18Q9BV38 432 aa18.96■□□□□ 0.63
SEC13-210ENST00000428626 UNC93B1Q9H1C4 597 aa18.96■□□□□ 0.63
SEC13-210ENST00000428626 ASCC2Q9H1I8 757 aaPredicted RBP18.96■□□□□ 0.63
SEC13-210ENST00000428626 ADCY3O60266 1144 aa18.95■□□□□ 0.62
SEC13-210ENST00000428626 IGSF3O75054 1194 aa18.95■□□□□ 0.62
SEC13-210ENST00000428626 MTMR2Q13614 643 aa18.95■□□□□ 0.62
SEC13-210ENST00000428626 FAM110CQ1W6H9 321 aa18.95■□□□□ 0.62
SEC13-210ENST00000428626 UBE2Q1Q7Z7E8 422 aa18.95■□□□□ 0.62
SEC13-210ENST00000428626 TBC1D2Q9BYX2 928 aa18.95■□□□□ 0.62
SEC13-210ENST00000428626 RNF208Q9H0X6 261 aa18.95■□□□□ 0.62
SEC13-210ENST00000428626 COG6Q9Y2V7 657 aa18.95■□□□□ 0.62
SEC13-210ENST00000428626 GJB1P08034 283 aa18.94■□□□□ 0.62
SEC13-210ENST00000428626 GJA8P48165 433 aa18.94■□□□□ 0.62
SEC13-210ENST00000428626 BACE1P56817 501 aa18.94■□□□□ 0.62
SEC13-210ENST00000428626 SLAIN1Q8ND83 568 aa18.94■□□□□ 0.62
SEC13-210ENST00000428626 ZBTB40Q9NUA8 1239 aa18.94■□□□□ 0.62
SEC13-210ENST00000428626 BIN2Q9UBW5 565 aaPredicted RBP18.94■□□□□ 0.62
SEC13-210ENST00000428626 PNMA3Q9UL41 463 aa18.94■□□□□ 0.62
SEC13-210ENST00000428626 ZBTB21Q9ULJ3 1066 aa18.94■□□□□ 0.62
SEC13-210ENST00000428626 ASNSP08243 561 aa18.93■□□□□ 0.62
SEC13-210ENST00000428626 IRF5Q13568 498 aa18.93■□□□□ 0.62
SEC13-210ENST00000428626 HABP4Q5JVS0 413 aaKnown RBP18.93■□□□□ 0.62
SEC13-210ENST00000428626 POTEEQ6S8J3 1075 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms