RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 GPAT2Q6NUI2 795 aa11.51□□□□□ -0.57
TRIM39-208ENST00000428555 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
TRIM39-208ENST00000428555 FOXP4Q8IVH2 680 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-208ENST00000428555 DHX36Q9H2U1 1008 aaKnown RBP11.51□□□□□ -0.57
TRIM39-208ENST00000428555 HPS5Q9UPZ3 1129 aa11.51□□□□□ -0.57
TRIM39-208ENST00000428555 TRIM17Q9Y577 477 aa11.51□□□□□ -0.57
TRIM39-208ENST00000428555 MYH2Q9UKX2 1941 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 TLR2O60603 784 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 PDE6AP16499 860 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 CAP2P40123 477 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 USP5P45974 858 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 SLFNL1Q499Z3 407 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 FBXO46Q6PJ61 603 aaPredicted RBP11.5□□□□□ -0.57
TRIM39-208ENST00000428555 OTOP1Q7RTM1 612 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 ERO1AQ96HE7 468 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 CRBNQ96SW2 442 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 ZCCHC17Q9NP64 241 aaKnown RBP11.5□□□□□ -0.57
TRIM39-208ENST00000428555 PAG1Q9NWQ8 432 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 HERC5Q9UII4 1024 aaKnown RBP11.5□□□□□ -0.57
TRIM39-208ENST00000428555 FLT1P17948 1338 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 MYH13Q9UKX3 1938 aa11.5□□□□□ -0.57
TRIM39-208ENST00000428555 A0A0G2JLL6 359 aaPredicted RBP11.49□□□□□ -0.57
TRIM39-208ENST00000428555 MAGEB6P1A0A0J9YX57 407 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 TRIM75PA6NK02 468 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 JAG1P78504 1218 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 SPP2Q13103 211 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
TRIM39-208ENST00000428555 C17orf99Q6UX52 265 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 GADL1Q6ZQY3 521 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 FASTKD5Q7L8L6 764 aaKnown RBP11.49□□□□□ -0.57
TRIM39-208ENST00000428555 PRRT2Q7Z6L0 340 aaPredicted RBP11.49□□□□□ -0.57
TRIM39-208ENST00000428555 METTL16Q86W50 562 aaKnown RBP11.49□□□□□ -0.57
TRIM39-208ENST00000428555 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
TRIM39-208ENST00000428555 HAUS7Q99871 368 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 RIOK1Q9BRS2 568 aaKnown RBP11.49□□□□□ -0.57
TRIM39-208ENST00000428555 CPA4Q9UI42 421 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 ZNF532Q9HCE3 1301 aa11.49□□□□□ -0.57
TRIM39-208ENST00000428555 TCRBV5S4A2TA0A5A2 114 aa11.48□□□□□ -0.57
TRIM39-208ENST00000428555 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
TRIM39-208ENST00000428555 CHGBP05060 677 aa11.48□□□□□ -0.57
TRIM39-208ENST00000428555 CYP2C8P10632 490 aa11.48□□□□□ -0.57
TRIM39-208ENST00000428555 CERS3Q8IU89 383 aa11.48□□□□□ -0.57
TRIM39-208ENST00000428555 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
TRIM39-208ENST00000428555 DNAJC18Q9H819 358 aa11.48□□□□□ -0.57
TRIM39-208ENST00000428555 ECHDC1Q9NTX5 307 aa11.48□□□□□ -0.57
TRIM39-208ENST00000428555 AK9Q5TCS8 1911 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 COL2A1P02458 1487 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-208ENST00000428555 USP17L5A8MUK1 530 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 HLA-DOAP06340 250 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 RGS19P49795 217 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 PLCD1P51178 756 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 SOX10P56693 466 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 SHROOM1Q2M3G4 852 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-208ENST00000428555 ZNF280CQ8ND82 737 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 ARHGAP39Q9C0H5 1083 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 PTPN22Q9Y2R2 807 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 OTOFQ9HC10 1997 aa11.47□□□□□ -0.57
TRIM39-208ENST00000428555 GDF11O95390 407 aa11.46□□□□□ -0.57
TRIM39-208ENST00000428555 ADD2P35612 726 aa11.46□□□□□ -0.57
TRIM39-208ENST00000428555 LACTBP83111 547 aaPredicted RBP11.46□□□□□ -0.57
TRIM39-208ENST00000428555 KIF22Q14807 665 aa11.46□□□□□ -0.57
TRIM39-208ENST00000428555 ARHGEF6Q15052 776 aa11.46□□□□□ -0.57
TRIM39-208ENST00000428555 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.57
TRIM39-208ENST00000428555 TTC6Q86TZ1 520 aa11.46□□□□□ -0.57
TRIM39-208ENST00000428555 LCORLQ8N3X6 602 aa11.46□□□□□ -0.57
TRIM39-208ENST00000428555 CRNKL1Q9BZJ0 848 aaKnown RBP11.46□□□□□ -0.57
TRIM39-208ENST00000428555 ARMT1Q9H993 441 aa11.46□□□□□ -0.57
TRIM39-208ENST00000428555 HTTP42858 3142 aa11.46□□□□□ -0.58
TRIM39-208ENST00000428555 PRKAB2O43741 272 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 POLR3DP05423 398 aaPredicted RBP11.45□□□□□ -0.58
TRIM39-208ENST00000428555 ASNSP08243 561 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 CTGFP29279 349 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 HMGCS2P54868 508 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 TREML2Q5T2D2 321 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 SDR42E1Q8WUS8 393 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 PARK7Q99497 189 aaKnown RBP11.45□□□□□ -0.58
TRIM39-208ENST00000428555 WDR18Q9BV38 432 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRIM39-208ENST00000428555 MCM9Q9NXL9 1143 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 SERPINB13Q9UIV8 391 aa11.45□□□□□ -0.58
TRIM39-208ENST00000428555 ADGRA2Q96PE1 1338 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 MBD4O95243 580 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 BCRP11274 1271 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 PSMC4P43686 418 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 MLLT1Q03111 559 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-208ENST00000428555 EVX2Q03828 476 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 UBE3CQ15386 1083 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 TATDN1Q6P1N9 297 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 OTUD7AQ8TE49 926 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-208ENST00000428555 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 AS3MTQ9HBK9 375 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 DCP1AQ9NPI6 582 aaPredicted RBP11.44□□□□□ -0.58
TRIM39-208ENST00000428555 ZBTB21Q9ULJ3 1066 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 AGTPBP1Q9UPW5 1226 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
TRIM39-208ENST00000428555 USP17L10C9JJH3 530 aa11.43□□□□□ -0.58
TRIM39-208ENST00000428555 FMNL1O95466 1100 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms