RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 OLFM4Q6UX06 510 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 REXO1L1PQ8IX06 675 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 INTS13Q9NVM9 706 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 ANAPC4Q9UJX5 808 aa9.05□□□□□ -0.96
LRCH3-204ENST00000428136 IFIT3O14879 490 aaKnown RBP9.04□□□□□ -0.96
LRCH3-204ENST00000428136 MORC3Q14149 939 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 PPP2R5BQ15173 497 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 NFXL1Q6ZNB6 911 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 CRACR2BQ8N4Y2 399 aaPredicted RBP9.04□□□□□ -0.96
LRCH3-204ENST00000428136 ENOX1Q8TC92 643 aaKnown RBP9.04□□□□□ -0.96
LRCH3-204ENST00000428136 NAPBQ9H115 298 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 STRN4Q9NRL3 753 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 HOOK1Q9UJC3 728 aaKnown RBP9.04□□□□□ -0.96
LRCH3-204ENST00000428136 ZBTB1Q9Y2K1 713 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 PHLPP1O60346 1717 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 MBD4O95243 580 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 DEXIO95424 95 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 PDE4BQ07343 736 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 FBXO38Q6PIJ6 1188 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 MFSD6Q6ZSS7 791 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 MAGEB6Q8N7X4 407 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 MLKLQ8NB16 471 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 CNNM3Q8NE01 707 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 SLC26A6Q9BXS9 759 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 INCENPQ9NQS7 918 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 FANCLQ9NW38 375 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 MAN1B1Q9UKM7 699 aa9.04□□□□□ -0.96
LRCH3-204ENST00000428136 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
LRCH3-204ENST00000428136 SRPRBQ9Y5M8 271 aaKnown RBP9.04□□□□□ -0.96
LRCH3-204ENST00000428136 COL14A1Q05707 1796 aaKnown RBP9.04□□□□□ -0.96
LRCH3-204ENST00000428136 GUCY1A2P33402 732 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 CTDSPL2Q05D32 466 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 GNL2Q13823 731 aaKnown RBP9.03□□□□□ -0.96
LRCH3-204ENST00000428136 SYT10Q6XYQ8 523 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.03□□□□□ -0.968e-8■■■■□ 20
LRCH3-204ENST00000428136 DLEC1Q9Y238 1755 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 CCDC196A0A1B0GTZ2 297 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 BTBD18B2RXH4 712 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 UBE2Q2LH0YL09 131 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 FAM193AP78312 1265 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 POSTNQ15063 836 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 ELF2Q15723 593 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 KANK3Q6NY19 840 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 DZIP3Q86Y13 1208 aaKnown RBP9.03□□□□□ -0.96
LRCH3-204ENST00000428136 DIS3L2Q8IYB7 885 aaKnown RBP9.03□□□□□ -0.96
LRCH3-204ENST00000428136 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
LRCH3-204ENST00000428136 ARMT1Q9H993 441 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 STRCQ7RTU9 1775 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 ARHGAP6O43182 974 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 SERPINC1P01008 464 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 EIF5P55010 431 aaKnown RBP9.03□□□□□ -0.96
LRCH3-204ENST00000428136 SAFBQ15424 915 aaKnown RBP eCLIP9.03□□□□□ -0.96
LRCH3-204ENST00000428136 SEC23AQ15436 765 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 RTN1Q16799 776 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 MYL10Q9BUA6 226 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 NACAP1Q9BZK3 213 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 ZNF446Q9NWS9 450 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 DACH1Q9UI36 760 aa9.03□□□□□ -0.96
LRCH3-204ENST00000428136 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
LRCH3-204ENST00000428136 ISM2Q6H9L7 571 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 TRIM22Q8IYM9 498 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 LCORLQ8N3X6 602 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 RNF41Q9H4P4 317 aaPredicted RBP9.02□□□□□ -0.97
LRCH3-204ENST00000428136 CEP131Q9UPN4 1083 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 A0A1B0GUL6 1792 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 GOLGA6L9A6NEM1 432 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 TMEM232C9JQI7 657 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 FANCGO15287 622 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 ZSCAN12O43309 604 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 STX10O60499 249 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 FGRP09769 529 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 TOP1P11387 765 aaKnown RBP9.02□□□□□ -0.97
LRCH3-204ENST00000428136 ERCC5P28715 1186 aaPredicted RBP9.02□□□□□ -0.97
LRCH3-204ENST00000428136 WTAPQ15007 396 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 SART3Q15020 963 aaKnown RBP9.02□□□□□ -0.97
LRCH3-204ENST00000428136 CFAP100Q494V2 611 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 SH3RF1Q7Z6J0 888 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 KRT222Q8N1A0 295 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 FANCBQ8NB91 859 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 MED15Q96RN5 788 aa9.02□□□□□ -0.97
LRCH3-204ENST00000428136 RNF26Q9BY78 433 aaPredicted RBP9.02□□□□□ -0.97
LRCH3-204ENST00000428136 FOXN1O15353 648 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 PRKAB2O43741 272 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 GRIN1Q05586 938 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 SUSD4Q5VX71 490 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 INTS5Q6P9B9 1019 aaKnown RBP9.01□□□□□ -0.97
LRCH3-204ENST00000428136 BCL11BQ9C0K0 894 aaPredicted RBP9.01□□□□□ -0.97
LRCH3-204ENST00000428136 AATFQ9NY61 560 aaKnown RBP eCLIP9.01□□□□□ -0.97
LRCH3-204ENST00000428136 ZNF804BA4D1E1 1349 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 VWA3AA6NCI4 1184 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 SLFN14P0C7P3 912 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 FMR1Q06787 632 aaKnown RBP eCLIP9.01□□□□□ -0.978e-8■■■■■ 27.8
LRCH3-204ENST00000428136 FUT2Q10981 343 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 NR1I3Q14994 352 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 TC2NQ8N9U0 490 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 PCDHB6Q9Y5E3 794 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 SLC4A4Q9Y6R1 1079 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 PARP10Q53GL7 1025 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 SPECC1LQ69YQ0 1117 aa9.01□□□□□ -0.97
LRCH3-204ENST00000428136 APTXQ7Z2E3 356 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms