RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ADD2P35612 726 aa18.02■□□□□ 0.48
RTN4-210ENST00000427710 SCYL3Q8IZE3 742 aa18.02■□□□□ 0.48
RTN4-210ENST00000427710 FAM43AQ8N2R8 423 aa18.02■□□□□ 0.48
RTN4-210ENST00000427710 ZNF296Q8WUU4 475 aaPredicted RBP18.02■□□□□ 0.48
RTN4-210ENST00000427710 GPR25O00155 361 aa18.01■□□□□ 0.47
RTN4-210ENST00000427710 TBC1D12O60347 775 aa18.01■□□□□ 0.47
RTN4-210ENST00000427710 PPATQ06203 517 aa18.01■□□□□ 0.47
RTN4-210ENST00000427710 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
RTN4-210ENST00000427710 LCORLQ8N3X6 602 aa18.01■□□□□ 0.47
RTN4-210ENST00000427710 GPATCH3Q96I76 525 aa18.01■□□□□ 0.47
RTN4-210ENST00000427710 ARMT1Q9H993 441 aa18.01■□□□□ 0.47
RTN4-210ENST00000427710 PICK1Q9NRD5 415 aa18.01■□□□□ 0.47
RTN4-210ENST00000427710 DDX60LQ5H9U9 1706 aaKnown RBP18.01■□□□□ 0.47
RTN4-210ENST00000427710 BTBD19C9JJ37 291 aa18■□□□□ 0.47
RTN4-210ENST00000427710 ALDH1A1P00352 501 aa18■□□□□ 0.47
RTN4-210ENST00000427710 IGHDP01880 384 aa18■□□□□ 0.47
RTN4-210ENST00000427710 PTPRAP18433 802 aa18■□□□□ 0.47
RTN4-210ENST00000427710 EVX2Q03828 476 aa18■□□□□ 0.47
RTN4-210ENST00000427710 CRHR2Q13324 411 aa18■□□□□ 0.47
RTN4-210ENST00000427710 SNAPC2Q13487 334 aa18■□□□□ 0.47
RTN4-210ENST00000427710 DGKZQ13574 1117 aa18■□□□□ 0.47
RTN4-210ENST00000427710 SHROOM1Q2M3G4 852 aaPredicted RBP18■□□□□ 0.47
RTN4-210ENST00000427710 OTUD7BQ6GQQ9 843 aa18■□□□□ 0.47
RTN4-210ENST00000427710 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
RTN4-210ENST00000427710 DNAJC18Q9H819 358 aa18■□□□□ 0.47
RTN4-210ENST00000427710 PI4KBQ9UBF8 816 aa18■□□□□ 0.47
RTN4-210ENST00000427710 ZHX2Q9Y6X8 837 aa18■□□□□ 0.47
RTN4-210ENST00000427710 ZSWIM8A7E2V4 1837 aa18■□□□□ 0.47
RTN4-210ENST00000427710 CTNND1O60716 968 aaKnown RBP17.99■□□□□ 0.47
RTN4-210ENST00000427710 CETPP11597 493 aa17.99■□□□□ 0.47
RTN4-210ENST00000427710 B4GALNT3Q6L9W6 998 aa17.99■□□□□ 0.47
RTN4-210ENST00000427710 CRACR2BQ8N4Y2 399 aaPredicted RBP17.99■□□□□ 0.47
RTN4-210ENST00000427710 MCOLN1Q9GZU1 580 aa17.99■□□□□ 0.47
RTN4-210ENST00000427710 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
RTN4-210ENST00000427710 PRKAB2O43741 272 aa17.98■□□□□ 0.47
RTN4-210ENST00000427710 MBD4O95243 580 aa17.98■□□□□ 0.47
RTN4-210ENST00000427710 JAG1P78504 1218 aa17.98■□□□□ 0.47
RTN4-210ENST00000427710 TAF1CQ15572 869 aaPredicted RBP17.98■□□□□ 0.47
RTN4-210ENST00000427710 PI4K2BQ8TCG2 481 aa17.98■□□□□ 0.47
RTN4-210ENST00000427710 GCC1Q96CN9 775 aa17.98■□□□□ 0.47
RTN4-210ENST00000427710 CFHR5Q9BXR6 569 aa17.98■□□□□ 0.47
RTN4-210ENST00000427710 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.98■□□□□ 0.47
RTN4-210ENST00000427710 KCNH4Q9UQ05 1017 aa17.98■□□□□ 0.47
RTN4-210ENST00000427710 FKTNO75072 461 aa17.97■□□□□ 0.47
RTN4-210ENST00000427710 GDF11O95390 407 aa17.97■□□□□ 0.47
RTN4-210ENST00000427710 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
RTN4-210ENST00000427710 MOGSQ13724 837 aa17.97■□□□□ 0.47
RTN4-210ENST00000427710 TRIM34Q9BYJ4 488 aa17.97■□□□□ 0.47
RTN4-210ENST00000427710 CRNKL1Q9BZJ0 848 aaKnown RBP17.97■□□□□ 0.47
RTN4-210ENST00000427710 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
RTN4-210ENST00000427710 HERC5Q9UII4 1024 aaKnown RBP17.97■□□□□ 0.47
RTN4-210ENST00000427710 AFG3L2Q9Y4W6 797 aa17.97■□□□□ 0.47
RTN4-210ENST00000427710 TRIM75PA6NK02 468 aa17.96■□□□□ 0.47
RTN4-210ENST00000427710 CYP2D6P10635 497 aa17.96■□□□□ 0.47
RTN4-210ENST00000427710 MX1P20591 662 aa17.96■□□□□ 0.47
RTN4-210ENST00000427710 CAP2P40123 477 aa17.96■□□□□ 0.47
RTN4-210ENST00000427710 PLCD1P51178 756 aa17.96■□□□□ 0.47
RTN4-210ENST00000427710 TMED8Q6PL24 325 aaPredicted RBP17.96■□□□□ 0.47
RTN4-210ENST00000427710 GADL1Q6ZQY3 521 aa17.96■□□□□ 0.47
RTN4-210ENST00000427710 CERS3Q8IU89 383 aa17.96■□□□□ 0.47
RTN4-210ENST00000427710 FOXP4Q8IVH2 680 aaPredicted RBP17.96■□□□□ 0.47
RTN4-210ENST00000427710 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
RTN4-210ENST00000427710 PUS7LQ9H0K6 701 aaKnown RBP17.96■□□□□ 0.47
RTN4-210ENST00000427710 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
RTN4-210ENST00000427710 TTC41PQ6P2S7 1318 aa17.96■□□□□ 0.46
RTN4-210ENST00000427710 SALL3Q9BXA9 1300 aa17.96■□□□□ 0.46
RTN4-210ENST00000427710 POLR3DP05423 398 aaPredicted RBP17.95■□□□□ 0.46
RTN4-210ENST00000427710 AAMPQ13685 434 aa17.95■□□□□ 0.46
RTN4-210ENST00000427710 UBE3CQ15386 1083 aa17.95■□□□□ 0.46
RTN4-210ENST00000427710 METTL16Q86W50 562 aaKnown RBP17.95■□□□□ 0.46
RTN4-210ENST00000427710 KBTBD3Q8NAB2 608 aa17.95■□□□□ 0.46
RTN4-210ENST00000427710 ABHD8Q96I13 439 aa17.95■□□□□ 0.46
RTN4-210ENST00000427710 ZFYVE28Q9HCC9 887 aa17.95■□□□□ 0.46
RTN4-210ENST00000427710 MCM9Q9NXL9 1143 aa17.95■□□□□ 0.46
RTN4-210ENST00000427710 DOCK3Q8IZD9 2030 aa17.94■□□□□ 0.46
RTN4-210ENST00000427710 SMIM22K7EJ46 135 aa17.94■□□□□ 0.46
RTN4-210ENST00000427710 CXCL11O14625 94 aa17.94■□□□□ 0.46
RTN4-210ENST00000427710 ERC2O15083 957 aa17.94■□□□□ 0.46
RTN4-210ENST00000427710 ECM2O94769 699 aaPredicted RBP17.94■□□□□ 0.46
RTN4-210ENST00000427710 CAP1Q01518 475 aa17.94■□□□□ 0.46
RTN4-210ENST00000427710 ZSCAN25Q6NSZ9 544 aa17.94■□□□□ 0.46
RTN4-210ENST00000427710 GPAT2Q6NUI2 795 aa17.94■□□□□ 0.46
RTN4-210ENST00000427710 CTU1Q7Z7A3 348 aaKnown RBP17.94■□□□□ 0.46
RTN4-210ENST00000427710 CD99L2Q8TCZ2 262 aa17.94■□□□□ 0.46
RTN4-210ENST00000427710 DCP1AQ9NPI6 582 aaPredicted RBP17.94■□□□□ 0.46
RTN4-210ENST00000427710 CYP2D7A0A087X1C5 515 aa17.93■□□□□ 0.46
RTN4-210ENST00000427710 A0A0G2JLL6 359 aaPredicted RBP17.93■□□□□ 0.46
RTN4-210ENST00000427710 PDHXO00330 501 aa17.93■□□□□ 0.46
RTN4-210ENST00000427710 GLRX3O76003 335 aaKnown RBP17.93■□□□□ 0.46
RTN4-210ENST00000427710 SPP2Q13103 211 aa17.93■□□□□ 0.46
RTN4-210ENST00000427710 PRRT2Q7Z6L0 340 aaPredicted RBP17.93■□□□□ 0.46
RTN4-210ENST00000427710 SMC5Q8IY18 1101 aa17.93■□□□□ 0.46
RTN4-210ENST00000427710 OSBP2Q969R2 916 aa17.93■□□□□ 0.46
RTN4-210ENST00000427710 LOC285556D6RIA3 1793 aa17.93■□□□□ 0.46
RTN4-210ENST00000427710 MGAMO43451 1857 aa17.92■□□□□ 0.46
RTN4-210ENST00000427710 USP17L5A8MUK1 530 aa17.92■□□□□ 0.46
RTN4-210ENST00000427710 M0R2C6 588 aa17.92■□□□□ 0.46
RTN4-210ENST00000427710 RNF113AO15541 343 aaKnown RBP17.92■□□□□ 0.46
RTN4-210ENST00000427710 NOM1Q5C9Z4 860 aaKnown RBP17.92■□□□□ 0.46
RTN4-210ENST00000427710 ANKRD23Q86SG2 305 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms