RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 ZDHHC9Q9Y397 364 aa21.15■□□□□ 0.98
AC055811.2-201ENST00000427497 GPR75-ASB3A0A0A6YYF3 556 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 B4E1Z4 1266 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 PFKFB2O60825 505 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 APOBRQ0VD83 1088 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 DEFB115Q30KQ5 88 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 CST9Q5W186 159 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 CTR9Q6PD62 1173 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 MFSD6Q6ZSS7 791 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 SLF2Q8IX21 1173 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 CERS5Q8N5B7 392 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 ZNF274Q96GC6 653 aaPredicted RBP21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 KRT23Q9C075 422 aa21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 RNF41Q9H4P4 317 aaPredicted RBP21.14■□□□□ 0.97
AC055811.2-201ENST00000427497 CDK5RAP2Q96SN8 1893 aa21.13■□□□□ 0.97
AC055811.2-201ENST00000427497 SAMD7Q7Z3H4 446 aa21.13■□□□□ 0.97
AC055811.2-201ENST00000427497 INCENPQ9NQS7 918 aa21.13■□□□□ 0.97
AC055811.2-201ENST00000427497 BRD1O95696 1058 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 SBK1Q52WX2 424 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 SH3RF3Q8TEJ3 882 aaPredicted RBP21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 NOL10Q9BSC4 688 aaKnown RBP21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 GLIS2Q9BZE0 524 aaPredicted RBP21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 GPHNQ9NQX3 736 aaPredicted RBP21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 POLR2AP24928 1970 aaKnown RBP21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 MINDY4BA8MYZ0 360 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 USP17L12C9JPN9 530 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 USP17L21D6R901 530 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 EGFRP00533 1210 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 FGRP09769 529 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 FKBP1AP62942 108 aaKnown RBP21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 STK3Q13188 491 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 TBC1D10BQ4KMP7 808 aaPredicted RBP21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 TMEM87BQ96K49 555 aa21.12■□□□□ 0.97
AC055811.2-201ENST00000427497 PCP11498 1178 aaKnown RBP21.11■□□□□ 0.97
AC055811.2-201ENST00000427497 GJB2P29033 226 aa21.11■□□□□ 0.97
AC055811.2-201ENST00000427497 PDIA3P30101 505 aaKnown RBP21.11■□□□□ 0.97
AC055811.2-201ENST00000427497 BTDP43251 543 aa21.11■□□□□ 0.97
AC055811.2-201ENST00000427497 COL13A1Q5TAT6 717 aaPredicted RBP21.11■□□□□ 0.97
AC055811.2-201ENST00000427497 ZSWIM5Q9P217 1185 aa21.11■□□□□ 0.97
AC055811.2-201ENST00000427497 ARPP21Q9UBL0 812 aaPredicted RBP21.11■□□□□ 0.97
AC055811.2-201ENST00000427497 NAV1Q8NEY1 1877 aa21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 SH2B2O14492 632 aaPredicted RBP21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 KDM4AO75164 1064 aa21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 MCM4P33991 863 aa21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 SCRN1Q12765 414 aa21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 CDC37L1Q7L3B6 337 aa21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 IGDCC4Q8TDY8 1250 aa21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 MTA3Q9BTC8 594 aa21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 ANGEL1Q9UNK9 670 aaKnown RBP21.1■□□□□ 0.97
AC055811.2-201ENST00000427497 CYP2D7A0A087X1C5 515 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 SMIM22K7EJ46 135 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 PLCG2P16885 1265 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 DDX60LQ5H9U9 1706 aaKnown RBP21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 STRIP1Q5VSL9 837 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 RSBN1LQ6PCB5 846 aaPredicted RBP21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 FBXW7Q969H0 707 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 BRPF3Q9ULD4 1205 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 FOCADQ5VW36 1801 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 CELF2O95319 508 aaKnown RBP21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 RHBDL3P58872 404 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 RBM26Q5T8P6 1007 aaKnown RBP21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 AGBL3Q8NEM8 1001 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 GBP4Q96PP9 640 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 LLPHQ9BRT6 129 aaKnown RBP21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 DAGLAQ9Y4D2 1042 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 TLL2Q9Y6L7 1015 aa21.09■□□□□ 0.97
AC055811.2-201ENST00000427497 WDR33Q9C0J8 1336 aaKnown RBP21.08■□□□□ 0.97
AC055811.2-201ENST00000427497 USP5P45974 858 aa21.08■□□□□ 0.96
AC055811.2-201ENST00000427497 DACT2Q5SW24 774 aa21.08■□□□□ 0.96
AC055811.2-201ENST00000427497 MXD3Q9BW11 206 aa21.08■□□□□ 0.96
AC055811.2-201ENST00000427497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.08■□□□□ 0.96
AC055811.2-201ENST00000427497 USP17L3A6NCW0 530 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 USP17L4A6NCW7 530 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 SYT1P21579 422 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 LIFRP42702 1097 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 KIF4BQ2VIQ3 1234 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 USP17L1Q7RTZ2 530 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 SGMS1Q86VZ5 419 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 SMARCC2Q8TAQ2 1214 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 CHMP4CQ96CF2 233 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 GMLQ99445 158 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 TTF2Q9UNY4 1162 aaKnown RBP21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 HPS5Q9UPZ3 1129 aa21.07■□□□□ 0.96
AC055811.2-201ENST00000427497 KLF18A0A0U1RQI7 1052 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 ORC4O43929 436 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 ZNF280AP59817 542 aaPredicted RBP21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 RRP12Q5JTH9 1297 aaKnown RBP21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 C12orf60Q5U649 245 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 HHIPL2Q6UWX4 724 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 USP48Q86UV5 1035 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 TGFBRAP1Q8WUH2 860 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 LY9Q9HBG7 655 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 MCM9Q9NXL9 1143 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 ROBO3Q96MS0 1386 aa21.06■□□□□ 0.96
AC055811.2-201ENST00000427497 STX6O43752 255 aa21.05■□□□□ 0.96
AC055811.2-201ENST00000427497 BAG4O95429 457 aaKnown RBP21.05■□□□□ 0.96
AC055811.2-201ENST00000427497 USP17L8P0C7I0 530 aa21.05■□□□□ 0.96
AC055811.2-201ENST00000427497 CYP2D6P10635 497 aa21.05■□□□□ 0.96
AC055811.2-201ENST00000427497 PDIA4P13667 645 aaKnown RBP21.05■□□□□ 0.96
AC055811.2-201ENST00000427497 SAPCD2Q86UD0 394 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms