RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 RCOR1Q9UKL0 485 aa25.33■■□□□ 1.64
CNEP1R1-202ENST00000427478 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.33■■□□□ 1.64
CNEP1R1-202ENST00000427478 MROH7-TTC4A0A0A0MT08 1334 aa25.32■■□□□ 1.64
CNEP1R1-202ENST00000427478 STK36Q9NRP7 1315 aa25.32■■□□□ 1.64
CNEP1R1-202ENST00000427478 KIF28PB7ZC32 967 aa25.32■■□□□ 1.64
CNEP1R1-202ENST00000427478 POLR3DP05423 398 aaPredicted RBP25.32■■□□□ 1.64
CNEP1R1-202ENST00000427478 NPR1P16066 1061 aa25.32■■□□□ 1.64
CNEP1R1-202ENST00000427478 SSRP1Q08945 709 aaKnown RBP25.32■■□□□ 1.64
CNEP1R1-202ENST00000427478 SBK1Q52WX2 424 aa25.32■■□□□ 1.64
CNEP1R1-202ENST00000427478 UBE2Q2LH0YL09 131 aa25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 BAG3O95817 575 aa25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 USP17L8P0C7I0 530 aa25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 KIF23Q02241 960 aaPredicted RBP25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 IQCA1Q86XH1 822 aa25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 ANP32BQ92688 251 aaKnown RBP25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 NOL10Q9BSC4 688 aaKnown RBP25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 FMNL1O95466 1100 aaPredicted RBP25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 SLC3A2P08195 630 aaKnown RBP25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 IFNAR1P17181 557 aa25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 DACT1Q9NYF0 836 aa25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 MYH6P13533 1939 aa25.31■■□□□ 1.64
CNEP1R1-202ENST00000427478 RIMBP2O15034 1052 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 LDHCP07864 332 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 PDE6BP35913 854 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 KRT40Q6A162 431 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 OLFM4Q6UX06 510 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 BRAPQ7Z569 592 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 ORC4O43929 436 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 RCAN1P53805 252 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 MFSD14BQ5SR56 506 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 IFIT1BQ5T764 474 aaKnown RBP25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 FANCBQ8NB91 859 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 RGS22Q8NE09 1264 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 RTFDC1Q9BY42 306 aaPredicted RBP25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 NUP62CLQ9H1M0 184 aa25.3■■□□□ 1.64
CNEP1R1-202ENST00000427478 CMTR1Q8N1G2 835 aaKnown RBP25.29■■□□□ 1.64
CNEP1R1-202ENST00000427478 MKRN1Q9UHC7 482 aaKnown RBP25.29■■□□□ 1.64
CNEP1R1-202ENST00000427478 CCDC196A0A1B0GTZ2 297 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 PPP4CP60510 307 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 MYSM1Q5VVJ2 828 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 CCDC82Q8N4S0 544 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 PDE4BQ07343 736 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 CCDC173Q0VFZ6 552 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 TRIM29Q14134 588 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 CAMK4Q16566 473 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 FAM47AQ5JRC9 791 aa25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 RGS17Q9UGC6 210 aaPredicted RBP25.28■■□□□ 1.64
CNEP1R1-202ENST00000427478 NR1I2O75469 434 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 ALDH1B1P30837 517 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 BTDP43251 543 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 TRIM22Q8IYM9 498 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 TGFBRAP1Q8WUH2 860 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 DDX19AQ9NUU7 478 aaKnown RBP25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 RTEL1Q9NZ71 1219 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 GUCY1A2P33402 732 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 C12orf60Q5U649 245 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 NBPF11Q86T75 865 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 CLIC4Q9Y696 253 aa25.27■■□□□ 1.64
CNEP1R1-202ENST00000427478 CATIPQ7Z7H3 387 aa25.26■■□□□ 1.63
CNEP1R1-202ENST00000427478 MPNDQ8N594 471 aa25.26■■□□□ 1.63
CNEP1R1-202ENST00000427478 TBC1D22AQ8WUA7 517 aa25.26■■□□□ 1.63
CNEP1R1-202ENST00000427478 WASF1Q92558 559 aa25.26■■□□□ 1.63
CNEP1R1-202ENST00000427478 MASTLQ96GX5 879 aa25.26■■□□□ 1.63
CNEP1R1-202ENST00000427478 FUCA2Q9BTY2 467 aa25.26■■□□□ 1.63
CNEP1R1-202ENST00000427478 NMT2O60551 498 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 ME1P48163 572 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 POTEAQ6S8J7 498 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 CRACR2BQ8N4Y2 399 aaPredicted RBP25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 ANO8Q9HCE9 1232 aaPredicted RBP25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 GTF2IP78347 998 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 GNL2Q13823 731 aaKnown RBP25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 MAP3K11Q16584 847 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 MAPKAPK5Q8IW41 473 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 PPP1R9BQ96SB3 815 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 TNMDQ9H2S6 317 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 FAM205AQ6ZU69 1335 aa25.25■■□□□ 1.63
CNEP1R1-202ENST00000427478 DDX60LQ5H9U9 1706 aaKnown RBP25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 TSPY2A6NKD2 308 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 STK38Q15208 465 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 DPP8Q6V1X1 898 aaPredicted RBP25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 CCAR1Q8IX12 1150 aaKnown RBP25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 FBXW7Q969H0 707 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 COA1Q9GZY4 146 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 CLSTN2Q9H4D0 955 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 POLR3EQ9NVU0 708 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 GPR75-ASB3A0A0A6YYF3 556 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 EZH2Q15910 746 aaKnown RBP25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 AMOTL1Q8IY63 956 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 LINC00301Q8NCQ3 95 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 ZNF622Q969S3 477 aaKnown RBP eCLIP25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 DYNLL2Q96FJ2 89 aa25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 ZC3H12CQ9C0D7 883 aaKnown RBP25.24■■□□□ 1.63
CNEP1R1-202ENST00000427478 ROBO3Q96MS0 1386 aa25.23■■□□□ 1.63
CNEP1R1-202ENST00000427478 DEXIO95424 95 aa25.23■■□□□ 1.63
CNEP1R1-202ENST00000427478 SAP30BPQ9UHR5 308 aaKnown RBP25.23■■□□□ 1.63
CNEP1R1-202ENST00000427478 PPP2R5BQ15173 497 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 KLHL34Q8N239 644 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 GOLPH3LQ9H4A5 285 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 YEATS4O95619 227 aa25.22■■□□□ 1.63
CNEP1R1-202ENST00000427478 EN1Q05925 392 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms