RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 SHISA4Q96DD7 197 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 HTATIP2Q9BUP3 242 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 DHX36Q9H2U1 1008 aaKnown RBP15.84■□□□□ 0.13
NELFE-203ENST00000426722 AS3MTQ9HBK9 375 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 GABRQQ9UN88 632 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 LOC285556D6RIA3 1793 aa15.83■□□□□ 0.12
NELFE-203ENST00000426722 TNPO2O14787 897 aaKnown RBP15.83■□□□□ 0.12
NELFE-203ENST00000426722 ADCY3O60266 1144 aa15.83■□□□□ 0.12
NELFE-203ENST00000426722 CAP2P40123 477 aa15.83■□□□□ 0.12
NELFE-203ENST00000426722 GCLCP48506 637 aaPredicted RBP15.83■□□□□ 0.12
NELFE-203ENST00000426722 FLT3LGP49771 235 aa15.83■□□□□ 0.12
NELFE-203ENST00000426722 FAM110CQ1W6H9 321 aa15.83■□□□□ 0.12
NELFE-203ENST00000426722 TEX11Q8IYF3 940 aa15.83■□□□□ 0.12
NELFE-203ENST00000426722 COA7Q96BR5 231 aa15.83■□□□□ 0.12
NELFE-203ENST00000426722 PI4KBQ9UBF8 816 aa15.83■□□□□ 0.12
NELFE-203ENST00000426722 MAST2Q6P0Q8 1798 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 DOCK3Q8IZD9 2030 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 USP17L5A8MUK1 530 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 SGPL1O95470 568 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 SLURP2P0DP57 97 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 PPP4CP60510 307 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 ATP8B2P98198 1209 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 SPP2Q13103 211 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 POLA2Q14181 598 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 SH3D19Q5HYK7 790 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 TTC39AQ5SRH9 613 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 PI16Q6UXB8 463 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 SSH3Q8TE77 659 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 DPF3Q92784 378 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 CLUAP1Q96AJ1 413 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 ZNF512BQ96KM6 892 aaPredicted RBP15.82■□□□□ 0.12
NELFE-203ENST00000426722 GINM1Q9NU53 330 aa15.82■□□□□ 0.12
NELFE-203ENST00000426722 COLQQ9Y215 455 aaPredicted RBP15.82■□□□□ 0.12
NELFE-203ENST00000426722 FXR1P51114 621 aaKnown RBP eCLIP15.81■□□□□ 0.12
NELFE-203ENST00000426722 TNNI3KQ59H18 835 aa15.81■□□□□ 0.12
NELFE-203ENST00000426722 FOCADQ5VW36 1801 aa15.81■□□□□ 0.12
NELFE-203ENST00000426722 NAA16Q6N069 864 aaPredicted RBP15.81■□□□□ 0.12
NELFE-203ENST00000426722 UBE2Q1Q7Z7E8 422 aa15.81■□□□□ 0.12
NELFE-203ENST00000426722 FOXP4Q8IVH2 680 aaPredicted RBP15.81■□□□□ 0.12
NELFE-203ENST00000426722 TMEM57Q8N5G2 664 aa15.81■□□□□ 0.12
NELFE-203ENST00000426722 U2AF1L4Q8WU68 220 aaKnown RBP15.81■□□□□ 0.12
NELFE-203ENST00000426722 FPGT-TNNI3KV9GXZ4 949 aa15.81■□□□□ 0.12
NELFE-203ENST00000426722 MKI67P46013 3256 aaKnown RBP15.81■□□□□ 0.12
NELFE-203ENST00000426722 CDK5RAP2Q96SN8 1893 aa15.8■□□□□ 0.12
NELFE-203ENST00000426722 H0YGN5 161 aa15.8■□□□□ 0.12
NELFE-203ENST00000426722 OS9Q13438 667 aaPredicted RBP15.8■□□□□ 0.12
NELFE-203ENST00000426722 TREML2Q5T2D2 321 aa15.8■□□□□ 0.12
NELFE-203ENST00000426722 ANKRD13CQ8N6S4 541 aa15.8■□□□□ 0.12
NELFE-203ENST00000426722 WDR18Q9BV38 432 aa15.8■□□□□ 0.12
NELFE-203ENST00000426722 TNNQ9UQP3 1299 aa15.8■□□□□ 0.12
NELFE-203ENST00000426722 BRCA2P51587 3418 aa15.8■□□□□ 0.12
NELFE-203ENST00000426722 FAM196BA6NMK8 535 aa15.79■□□□□ 0.12
NELFE-203ENST00000426722 ASNSP08243 561 aa15.79■□□□□ 0.12
NELFE-203ENST00000426722 CCDC84Q86UT8 332 aaPredicted RBP15.79■□□□□ 0.12
NELFE-203ENST00000426722 METTL16Q86W50 562 aaKnown RBP15.79■□□□□ 0.12
NELFE-203ENST00000426722 CERS3Q8IU89 383 aa15.79■□□□□ 0.12
NELFE-203ENST00000426722 SH3RF3Q8TEJ3 882 aaPredicted RBP15.79■□□□□ 0.12
NELFE-203ENST00000426722 UNC93B1Q9H1C4 597 aa15.79■□□□□ 0.12
NELFE-203ENST00000426722 AATFQ9NY61 560 aaKnown RBP eCLIP15.79■□□□□ 0.12
NELFE-203ENST00000426722 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.79■□□□□ 0.12
NELFE-203ENST00000426722 NOP58Q9Y2X3 529 aaKnown RBP15.79■□□□□ 0.12
NELFE-203ENST00000426722 NR2E3Q9Y5X4 410 aa15.79■□□□□ 0.12
NELFE-203ENST00000426722 MYO5AQ9Y4I1 1855 aaKnown RBP15.78■□□□□ 0.12
NELFE-203ENST00000426722 SIPA1L1O43166 1804 aa15.78■□□□□ 0.12
NELFE-203ENST00000426722 C19orf81C9J6K1 198 aa15.78■□□□□ 0.12
NELFE-203ENST00000426722 SURF6O75683 361 aaKnown RBP15.78■□□□□ 0.12
NELFE-203ENST00000426722 FARP2O94887 1054 aaPredicted RBP15.78■□□□□ 0.12
NELFE-203ENST00000426722 INHAP05111 366 aa15.78■□□□□ 0.12
NELFE-203ENST00000426722 HMGCS2P54868 508 aa15.78■□□□□ 0.12
NELFE-203ENST00000426722 TMED8Q6PL24 325 aaPredicted RBP15.78■□□□□ 0.12
NELFE-203ENST00000426722 DBNDD2Q9BQY9 259 aa15.78■□□□□ 0.12
NELFE-203ENST00000426722 CYP2E1P05181 493 aaPredicted RBP15.77■□□□□ 0.12
NELFE-203ENST00000426722 ELNP15502 786 aa15.77■□□□□ 0.12
NELFE-203ENST00000426722 HOXA7P31268 230 aaPredicted RBP15.77■□□□□ 0.12
NELFE-203ENST00000426722 BACE1P56817 501 aa15.77■□□□□ 0.12
NELFE-203ENST00000426722 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.12
NELFE-203ENST00000426722 TGFBRAP1Q8WUH2 860 aa15.77■□□□□ 0.12
NELFE-203ENST00000426722 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.12
NELFE-203ENST00000426722 PAK6Q9NQU5 681 aaPredicted RBP15.77■□□□□ 0.12
NELFE-203ENST00000426722 SNRKQ9NRH2 765 aa15.77■□□□□ 0.12
NELFE-203ENST00000426722 TMOD4Q9NZQ9 345 aa15.77■□□□□ 0.12
NELFE-203ENST00000426722 MORF4L1Q9UBU8 362 aa15.77■□□□□ 0.12
NELFE-203ENST00000426722 FLT1P17948 1338 aa15.76■□□□□ 0.11
NELFE-203ENST00000426722 TFRCP02786 760 aaKnown RBP15.76■□□□□ 0.11
NELFE-203ENST00000426722 HLA-DOAP06340 250 aa15.76■□□□□ 0.11
NELFE-203ENST00000426722 FTSJ3Q8IY81 847 aaKnown RBP15.76■□□□□ 0.11
NELFE-203ENST00000426722 CRACR2BQ8N4Y2 399 aaPredicted RBP15.76■□□□□ 0.11
NELFE-203ENST00000426722 CRISPLD2Q9H0B8 497 aa15.76■□□□□ 0.11
NELFE-203ENST00000426722 ASCC2Q9H1I8 757 aaPredicted RBP15.76■□□□□ 0.11
NELFE-203ENST00000426722 MYH1P12882 1939 aa15.75■□□□□ 0.11
NELFE-203ENST00000426722 ZBTB7BO15156 539 aaPredicted RBP15.75■□□□□ 0.11
NELFE-203ENST00000426722 ZAP70P43403 619 aa15.75■□□□□ 0.11
NELFE-203ENST00000426722 IRX3P78415 501 aaPredicted RBP15.75■□□□□ 0.11
NELFE-203ENST00000426722 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
NELFE-203ENST00000426722 MAPKAPK5Q8IW41 473 aa15.75■□□□□ 0.11
NELFE-203ENST00000426722 ANKLE1Q8NAG6 615 aa15.75■□□□□ 0.11
NELFE-203ENST00000426722 GTF3C2Q8WUA4 911 aaPredicted RBP15.75■□□□□ 0.11
NELFE-203ENST00000426722 DEFB118Q96PH6 123 aa15.75■□□□□ 0.11
NELFE-203ENST00000426722 GJD2Q9UKL4 321 aa15.75■□□□□ 0.11
NELFE-203ENST00000426722 TAOK2Q9UL54 1235 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms