RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 SLC44A5Q8NCS7 719 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 TAOK2Q9UL54 1235 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 FLT1P17948 1338 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 USP17L3A6NCW0 530 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 USP17L4A6NCW7 530 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 PRPF40AO75400 957 aaKnown RBP20.35■□□□□ 0.85
FN1-208ENST00000426059 FGRP09769 529 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 LIFRP42702 1097 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 STRIP1Q5VSL9 837 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 USP17L1Q7RTZ2 530 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 SGMS1Q86VZ5 419 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 PIM2Q9P1W9 311 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 SUGT1Q9Y2Z0 365 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 SLC12A7Q9Y666 1083 aa20.35■□□□□ 0.85
FN1-208ENST00000426059 ERICH2A1L162 156 aa20.34■□□□□ 0.85
FN1-208ENST00000426059 GOLGA6L22H0YM25 854 aa20.34■□□□□ 0.85
FN1-208ENST00000426059 ZBTB43O43298 467 aa20.34■□□□□ 0.85
FN1-208ENST00000426059 FDPSP14324 419 aaKnown RBP20.34■□□□□ 0.85
FN1-208ENST00000426059 SART3Q15020 963 aaKnown RBP20.34■□□□□ 0.85
FN1-208ENST00000426059 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
FN1-208ENST00000426059 GZF1Q9H116 711 aaPredicted RBP20.34■□□□□ 0.85
FN1-208ENST00000426059 CPLX1O14810 134 aa20.34■□□□□ 0.85
FN1-208ENST00000426059 FAM173BQ6P4H8 233 aa20.34■□□□□ 0.85
FN1-208ENST00000426059 RTKN2Q8IZC4 609 aa20.34■□□□□ 0.85
FN1-208ENST00000426059 ZNF646O15015 1829 aaPredicted RBP20.33■□□□□ 0.85
FN1-208ENST00000426059 PLCG2P16885 1265 aa20.33■□□□□ 0.85
FN1-208ENST00000426059 PDCP20941 246 aa20.33■□□□□ 0.85
FN1-208ENST00000426059 TGFB2P61812 414 aa20.33■□□□□ 0.85
FN1-208ENST00000426059 ENAHQ8N8S7 591 aaPredicted RBP20.33■□□□□ 0.85
FN1-208ENST00000426059 ZSCAN10Q96SZ4 725 aaPredicted RBP20.33■□□□□ 0.85
FN1-208ENST00000426059 COL4A5P29400 1685 aa20.33■□□□□ 0.84
FN1-208ENST00000426059 SLC3A2P08195 630 aaKnown RBP20.32■□□□□ 0.84
FN1-208ENST00000426059 CRKP46108 304 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 GUCY1B3Q02153 619 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 PDE4BQ07343 736 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 SEC23AQ15436 765 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 TEKT1Q969V4 418 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 DDX4Q9NQI0 724 aaKnown RBP20.32■□□□□ 0.84
FN1-208ENST00000426059 LMBRD1Q9NUN5 540 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 USP40Q9NVE5 1235 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 MYH1P12882 1939 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 GOLGA8AA7E2F4 631 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 RBM5P52756 815 aaKnown RBP eCLIP20.32■□□□□ 0.84
FN1-208ENST00000426059 APOBEC3HQ6NTF7 200 aaKnown RBP20.32■□□□□ 0.84
FN1-208ENST00000426059 LARGE2Q8N3Y3 721 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 FAM217BQ9NTX9 383 aaPredicted RBP20.32■□□□□ 0.84
FN1-208ENST00000426059 CNPY2Q9Y2B0 182 aa20.32■□□□□ 0.84
FN1-208ENST00000426059 ORC4O43929 436 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 RAD17O75943 681 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 HMGN5P82970 282 aaKnown RBP20.31■□□□□ 0.84
FN1-208ENST00000426059 NUP133Q8WUM0 1156 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 PHKBQ93100 1093 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 SGIP1Q9BQI5 828 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 TSPY2A6NKD2 308 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 H3BQV1 296 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 CACNB3P54284 484 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 IFFO2Q5TF58 517 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 CDC42EP5Q6NZY7 148 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 AMOTL1Q8IY63 956 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 CMTR1Q8N1G2 835 aaKnown RBP20.31■□□□□ 0.84
FN1-208ENST00000426059 PSMD1Q99460 953 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 GJB4Q9NTQ9 266 aa20.31■□□□□ 0.84
FN1-208ENST00000426059 DHX16O60231 1041 aaKnown RBP20.3■□□□□ 0.84
FN1-208ENST00000426059 WDHD1O75717 1129 aaPredicted RBP20.3■□□□□ 0.84
FN1-208ENST00000426059 DNM1Q05193 864 aaKnown RBP20.3■□□□□ 0.84
FN1-208ENST00000426059 TPRNQ4KMQ1 711 aa20.3■□□□□ 0.84
FN1-208ENST00000426059 OTUD7BQ6GQQ9 843 aa20.3■□□□□ 0.84
FN1-208ENST00000426059 IQCA1Q86XH1 822 aa20.3■□□□□ 0.84
FN1-208ENST00000426059 CERS3Q8IU89 383 aa20.3■□□□□ 0.84
FN1-208ENST00000426059 MKNK2Q9HBH9 465 aa20.3■□□□□ 0.84
FN1-208ENST00000426059 UBE2Q2LH0YL09 131 aa20.3■□□□□ 0.84
FN1-208ENST00000426059 PCP11498 1178 aaKnown RBP20.3■□□□□ 0.84
FN1-208ENST00000426059 NCLP19338 710 aaKnown RBP20.3■□□□□ 0.84
FN1-208ENST00000426059 DALRD3Q5D0E6 543 aaKnown RBP20.3■□□□□ 0.84
FN1-208ENST00000426059 HHIPL2Q6UWX4 724 aa20.3■□□□□ 0.84
FN1-208ENST00000426059 CCDC82Q8N4S0 544 aa20.3■□□□□ 0.84
FN1-208ENST00000426059 ORC3Q9UBD5 711 aaPredicted RBP20.3■□□□□ 0.84
FN1-208ENST00000426059 FOCADQ5VW36 1801 aa20.29■□□□□ 0.84
FN1-208ENST00000426059 TFAP4Q01664 338 aa20.29■□□□□ 0.84
FN1-208ENST00000426059 IFIT1BQ5T764 474 aaKnown RBP20.29■□□□□ 0.84
FN1-208ENST00000426059 SYNE3Q6ZMZ3 975 aa20.29■□□□□ 0.84
FN1-208ENST00000426059 ZNF654Q8IZM8 581 aa20.29■□□□□ 0.84
FN1-208ENST00000426059 PTGER2P43116 358 aa20.29■□□□□ 0.84
FN1-208ENST00000426059 NFIAQ12857 509 aa20.29■□□□□ 0.84
FN1-208ENST00000426059 AIFM3Q96NN9 605 aa20.29■□□□□ 0.84
FN1-208ENST00000426059 DDX60LQ5H9U9 1706 aaKnown RBP20.28■□□□□ 0.84
FN1-208ENST00000426059 SLURP2P0DP57 97 aa20.28■□□□□ 0.84
FN1-208ENST00000426059 NTRK3Q16288 839 aa20.28■□□□□ 0.84
FN1-208ENST00000426059 CHMP4CQ96CF2 233 aa20.28■□□□□ 0.84
FN1-208ENST00000426059 BCS1LQ9Y276 419 aa20.28■□□□□ 0.84
FN1-208ENST00000426059 ZBTB12Q9Y330 459 aaPredicted RBP20.28■□□□□ 0.84
FN1-208ENST00000426059 DDX49Q9Y6V7 483 aaKnown RBP20.28■□□□□ 0.84
FN1-208ENST00000426059 BRCA1P38398 1863 aaKnown RBP20.27■□□□□ 0.84
FN1-208ENST00000426059 TMTC2Q8N394 836 aa20.27■□□□□ 0.84
FN1-208ENST00000426059 MTA3Q9BTC8 594 aa20.27■□□□□ 0.84
FN1-208ENST00000426059 IL17RBQ9NRM6 502 aa20.27■□□□□ 0.84
FN1-208ENST00000426059 ROBO3Q96MS0 1386 aa20.27■□□□□ 0.84
FN1-208ENST00000426059 PSMD14O00487 310 aa20.27■□□□□ 0.83
FN1-208ENST00000426059 FIBPO43427 364 aa20.27■□□□□ 0.83
FN1-208ENST00000426059 CDK8P49336 464 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms