RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
MDC1-205ENST00000425072 GPRC5DQ9NZD1 345 aa12.19□□□□□ -0.46
MDC1-205ENST00000425072 LIMCH1Q9UPQ0 1083 aa12.19□□□□□ -0.46
MDC1-205ENST00000425072 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
MDC1-205ENST00000425072 MYH1P12882 1939 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 ERICH2A1L162 156 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 WNT10BO00744 389 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 ORC4O43929 436 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 RRP12Q5JTH9 1297 aaKnown RBP12.18□□□□□ -0.46
MDC1-205ENST00000425072 IQCA1Q86XH1 822 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 ZSCAN29Q8IWY8 852 aaPredicted RBP12.18□□□□□ -0.46
MDC1-205ENST00000425072 TTC14Q96N46 770 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 TRIM34Q9BYJ4 488 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 ZSWIM5Q9P217 1185 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 SWAP70Q9UH65 585 aa12.18□□□□□ -0.46
MDC1-205ENST00000425072 SAP30BPQ9UHR5 308 aaKnown RBP12.18□□□□□ -0.46
MDC1-205ENST00000425072 ZNF541Q9H0D2 1346 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 ZNF646O15015 1829 aaPredicted RBP12.17□□□□□ -0.46
MDC1-205ENST00000425072 GLTPD2A6NH11 291 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 K7ELQ4 463 aaPredicted RBP12.17□□□□□ -0.46
MDC1-205ENST00000425072 RANBP6O60518 1105 aaKnown RBP12.17□□□□□ -0.46
MDC1-205ENST00000425072 DDNO94850 711 aaPredicted RBP12.17□□□□□ -0.46
MDC1-205ENST00000425072 PLCD1P51178 756 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 Q6ZUG5 572 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 STOX1Q6ZVD7 989 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 TNS4Q8IZW8 715 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 HOOK2Q96ED9 719 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 TBC1D2Q9BYX2 928 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 EHD4Q9H223 541 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 SH2B1Q9NRF2 756 aaPredicted RBP12.17□□□□□ -0.46
MDC1-205ENST00000425072 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 SERPINB13Q9UIV8 391 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 TAF6LQ9Y6J9 622 aa12.17□□□□□ -0.46
MDC1-205ENST00000425072 CYP2D7A0A087X1C5 515 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 B4E1Z4 1266 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 PRC1O43663 620 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 KDM4AO75164 1064 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 HSP90AA1P07900 732 aaKnown RBP12.16□□□□□ -0.46
MDC1-205ENST00000425072 LIFRP42702 1097 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 CDK8P49336 464 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 TCP10Q12799 353 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 NFIAQ12857 509 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 KIF4BQ2VIQ3 1234 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 NBPF9Q3BBW0 867 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 SYNE3Q6ZMZ3 975 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 C16orf86Q6ZW13 317 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 TBC1D10CQ8IV04 446 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 MB21D2Q8IYB1 491 aaPredicted RBP12.16□□□□□ -0.46
MDC1-205ENST00000425072 CRACR2BQ8N4Y2 399 aaPredicted RBP12.16□□□□□ -0.46
MDC1-205ENST00000425072 DNAJC5GQ8N7S2 189 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 CCDC17Q96LX7 622 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 UBAC1Q9BSL1 405 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 VEZTQ9HBM0 779 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 DDX4Q9NQI0 724 aaKnown RBP12.16□□□□□ -0.46
MDC1-205ENST00000425072 ADARB2Q9NS39 739 aaKnown RBP12.16□□□□□ -0.46
MDC1-205ENST00000425072 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 ECM29Q5VYK3 1845 aa12.16□□□□□ -0.46
MDC1-205ENST00000425072 CDK5RAP2Q96SN8 1893 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 CLRN2A0PK11 232 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 IQCA1LA6NCM1 817 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 TSPY2A6NKD2 308 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 TCP10L2B9ZVM9 353 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 IFIT3O14879 490 aaKnown RBP12.15□□□□□ -0.46
MDC1-205ENST00000425072 CYP2D6P10635 497 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 CPA1P15085 419 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 AK2P54819 239 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 TBC1D10BQ4KMP7 808 aaPredicted RBP12.15□□□□□ -0.46
MDC1-205ENST00000425072 USP50Q70EL3 339 aaPredicted RBP12.15□□□□□ -0.46
MDC1-205ENST00000425072 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
MDC1-205ENST00000425072 STK11IPQ8N1F8 1099 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 ZNF274Q96GC6 653 aaPredicted RBP12.15□□□□□ -0.46
MDC1-205ENST00000425072 L3MBTL3Q96JM7 780 aaPredicted RBP12.15□□□□□ -0.46
MDC1-205ENST00000425072 AGXT2Q9BYV1 514 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 INCENPQ9NQS7 918 aa12.15□□□□□ -0.46
MDC1-205ENST00000425072 HERC5Q9UII4 1024 aaKnown RBP12.15□□□□□ -0.46
MDC1-205ENST00000425072 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
MDC1-205ENST00000425072 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 TBC1D12O60347 775 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 TSPY3P0CV98 308 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 TSPY8P0CW00 308 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 EPS15P42566 896 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 CACNB3P54284 484 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 EVCP57679 992 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 TFAP4Q01664 338 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 TMEM67Q5HYA8 995 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
MDC1-205ENST00000425072 ZFPM1Q8IX07 1006 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 IGDCC4Q8TDY8 1250 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
MDC1-205ENST00000425072 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 HACL1Q9UJ83 578 aa12.14□□□□□ -0.47
MDC1-205ENST00000425072 ANGEL1Q9UNK9 670 aaKnown RBP12.14□□□□□ -0.47
MDC1-205ENST00000425072 DDTLA6NHG4 134 aaPredicted RBP12.13□□□□□ -0.47
MDC1-205ENST00000425072 DHX16O60231 1041 aaKnown RBP12.13□□□□□ -0.47
MDC1-205ENST00000425072 ABCB7O75027 752 aa12.13□□□□□ -0.47
MDC1-205ENST00000425072 GABPAQ06546 454 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms