RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 A0A1B0GUL7 405 aa19.96■□□□□ 0.79
PUDP-203ENST00000424830 NPM3O75607 178 aaKnown RBP19.96■□□□□ 0.79
PUDP-203ENST00000424830 HMGCRP04035 888 aa19.96■□□□□ 0.79
PUDP-203ENST00000424830 MECOMQ03112 1051 aa19.96■□□□□ 0.79
PUDP-203ENST00000424830 ZNF280CQ8ND82 737 aa19.96■□□□□ 0.79
PUDP-203ENST00000424830 API5Q9BZZ5 524 aaKnown RBP19.96■□□□□ 0.79
PUDP-203ENST00000424830 ALPK3Q96L96 1907 aa19.95■□□□□ 0.78
PUDP-203ENST00000424830 MAP4K4O95819 1239 aaPredicted RBP19.95■□□□□ 0.78
PUDP-203ENST00000424830 RHBDL3P58872 404 aa19.95■□□□□ 0.78
PUDP-203ENST00000424830 GSTO1P78417 241 aa19.95■□□□□ 0.78
PUDP-203ENST00000424830 SPP2Q13103 211 aa19.95■□□□□ 0.78
PUDP-203ENST00000424830 ANKLE1Q8NAG6 615 aa19.95■□□□□ 0.78
PUDP-203ENST00000424830 SLC17A8Q8NDX2 589 aa19.95■□□□□ 0.78
PUDP-203ENST00000424830 XAGE2Q96GT9 111 aa19.95■□□□□ 0.78
PUDP-203ENST00000424830 STAP2Q9UGK3 403 aa19.95■□□□□ 0.78
PUDP-203ENST00000424830 NOB1Q9ULX3 412 aaKnown RBP19.95■□□□□ 0.78
PUDP-203ENST00000424830 COL2A1P02458 1487 aaPredicted RBP19.95■□□□□ 0.78
PUDP-203ENST00000424830 FAM196BA6NMK8 535 aa19.94■□□□□ 0.78
PUDP-203ENST00000424830 LDHCP07864 332 aa19.94■□□□□ 0.78
PUDP-203ENST00000424830 HMGCS2P54868 508 aa19.93■□□□□ 0.78
PUDP-203ENST00000424830 DIS3LQ8TF46 1054 aaKnown RBP19.93■□□□□ 0.78
PUDP-203ENST00000424830 AS3MTQ9HBK9 375 aa19.93■□□□□ 0.78
PUDP-203ENST00000424830 SOX1O00570 391 aaPredicted RBP19.92■□□□□ 0.78
PUDP-203ENST00000424830 SRGAP3O43295 1099 aa19.92■□□□□ 0.78
PUDP-203ENST00000424830 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
PUDP-203ENST00000424830 TFCP2Q12800 502 aa19.92■□□□□ 0.78
PUDP-203ENST00000424830 GORABQ5T7V8 394 aa19.92■□□□□ 0.78
PUDP-203ENST00000424830 C7orf61Q8IZ16 206 aa19.92■□□□□ 0.78
PUDP-203ENST00000424830 LRCH3Q96II8 777 aa19.92■□□□□ 0.78
PUDP-203ENST00000424830 NEUROD6Q96NK8 337 aa19.92■□□□□ 0.78
PUDP-203ENST00000424830 MEIS3Q99687 375 aa19.92■□□□□ 0.78
PUDP-203ENST00000424830 HMX1Q9NP08 348 aaPredicted RBP19.92■□□□□ 0.78
PUDP-203ENST00000424830 USP17L5A8MUK1 530 aa19.91■□□□□ 0.78
PUDP-203ENST00000424830 CAP2P40123 477 aa19.91■□□□□ 0.78
PUDP-203ENST00000424830 SPATA5Q8NB90 893 aa19.91■□□□□ 0.78
PUDP-203ENST00000424830 ZNF384Q8TF68 577 aa19.91■□□□□ 0.78
PUDP-203ENST00000424830 NSUN4Q96CB9 384 aaKnown RBP19.91■□□□□ 0.78
PUDP-203ENST00000424830 NBPF3Q9H094 633 aa19.91■□□□□ 0.78
PUDP-203ENST00000424830 ASCC2Q9H1I8 757 aaPredicted RBP19.91■□□□□ 0.78
PUDP-203ENST00000424830 RAI14Q9P0K7 980 aa19.91■□□□□ 0.78
PUDP-203ENST00000424830 HERC5Q9UII4 1024 aaKnown RBP19.91■□□□□ 0.78
PUDP-203ENST00000424830 RPTORQ8N122 1335 aa19.91■□□□□ 0.78
PUDP-203ENST00000424830 DLL1O00548 723 aa19.9■□□□□ 0.78
PUDP-203ENST00000424830 MIER1Q8N108 512 aa19.9■□□□□ 0.78
PUDP-203ENST00000424830 CDCA7LQ96GN5 454 aa19.9■□□□□ 0.78
PUDP-203ENST00000424830 NOL10Q9BSC4 688 aaKnown RBP19.9■□□□□ 0.78
PUDP-203ENST00000424830 HMG20BQ9P0W2 317 aa19.9■□□□□ 0.78
PUDP-203ENST00000424830 DDX60LQ5H9U9 1706 aaKnown RBP19.89■□□□□ 0.78
PUDP-203ENST00000424830 CUL9Q8IWT3 2517 aa19.89■□□□□ 0.78
PUDP-203ENST00000424830 GNAI3P08754 354 aa19.89■□□□□ 0.77
PUDP-203ENST00000424830 BMP8BP34820 402 aa19.89■□□□□ 0.77
PUDP-203ENST00000424830 IRX3P78415 501 aaPredicted RBP19.89■□□□□ 0.77
PUDP-203ENST00000424830 SH3D19Q5HYK7 790 aa19.89■□□□□ 0.77
PUDP-203ENST00000424830 TEX11Q8IYF3 940 aa19.89■□□□□ 0.77
PUDP-203ENST00000424830 GJD2Q9UKL4 321 aa19.89■□□□□ 0.77
PUDP-203ENST00000424830 PI16Q6UXB8 463 aa19.88■□□□□ 0.77
PUDP-203ENST00000424830 TBC1D9Q6ZT07 1266 aa19.88■□□□□ 0.77
PUDP-203ENST00000424830 GDF15Q99988 308 aa19.88■□□□□ 0.77
PUDP-203ENST00000424830 C11orf49Q9H6J7 331 aa19.88■□□□□ 0.77
PUDP-203ENST00000424830 ZMYND8Q9ULU4 1186 aaPredicted RBP19.88■□□□□ 0.77
PUDP-203ENST00000424830 MTX1Q13505 466 aa19.87■□□□□ 0.77
PUDP-203ENST00000424830 MTMR2Q13614 643 aa19.87■□□□□ 0.77
PUDP-203ENST00000424830 GPR153Q6NV75 609 aa19.87■□□□□ 0.77
PUDP-203ENST00000424830 TMOD4Q9NZQ9 345 aa19.87■□□□□ 0.77
PUDP-203ENST00000424830 LRP2BPQ9P2M1 347 aa19.87■□□□□ 0.77
PUDP-203ENST00000424830 PI4KBQ9UBF8 816 aa19.87■□□□□ 0.77
PUDP-203ENST00000424830 MORF4L1Q9UBU8 362 aa19.87■□□□□ 0.77
PUDP-203ENST00000424830 ASNSP08243 561 aa19.86■□□□□ 0.77
PUDP-203ENST00000424830 ARID4AP29374 1257 aaPredicted RBP19.86■□□□□ 0.77
PUDP-203ENST00000424830 TRIM32Q13049 653 aa19.86■□□□□ 0.77
PUDP-203ENST00000424830 SOCS4Q8WXH5 440 aa19.86■□□□□ 0.77
PUDP-203ENST00000424830 TRIB2Q92519 343 aa19.86■□□□□ 0.77
PUDP-203ENST00000424830 WDR18Q9BV38 432 aa19.86■□□□□ 0.77
PUDP-203ENST00000424830 DHX36Q9H2U1 1008 aaKnown RBP19.86■□□□□ 0.77
PUDP-203ENST00000424830 OGDHLQ9ULD0 1010 aa19.86■□□□□ 0.77
PUDP-203ENST00000424830 PLXNB2O15031 1838 aa19.86■□□□□ 0.77
PUDP-203ENST00000424830 BAG3O95817 575 aa19.85■□□□□ 0.77
PUDP-203ENST00000424830 CYP2B6P20813 491 aa19.85■□□□□ 0.77
PUDP-203ENST00000424830 BACE1P56817 501 aa19.85■□□□□ 0.77
PUDP-203ENST00000424830 PDE3AQ14432 1141 aa19.85■□□□□ 0.77
PUDP-203ENST00000424830 RRP1BQ14684 758 aaKnown RBP19.85■□□□□ 0.77
PUDP-203ENST00000424830 TRMT2AQ8IZ69 625 aaKnown RBP19.85■□□□□ 0.77
PUDP-203ENST00000424830 GPRC5AQ8NFJ5 357 aa19.85■□□□□ 0.77
PUDP-203ENST00000424830 NUDT12Q9BQG2 462 aa19.85■□□□□ 0.77
PUDP-203ENST00000424830 TRIM34Q9BYJ4 488 aa19.85■□□□□ 0.77
PUDP-203ENST00000424830 MAST2Q6P0Q8 1798 aa19.84■□□□□ 0.77
PUDP-203ENST00000424830 UQCRFS1P1P0C7P4 283 aa19.84■□□□□ 0.77
PUDP-203ENST00000424830 PRKAR2AP13861 404 aaKnown RBP19.84■□□□□ 0.77
PUDP-203ENST00000424830 PLCG2P16885 1265 aa19.84■□□□□ 0.77
PUDP-203ENST00000424830 TRMT44Q8IYL2 757 aaKnown RBP19.84■□□□□ 0.77
PUDP-203ENST00000424830 SH3RF3Q8TEJ3 882 aaPredicted RBP19.84■□□□□ 0.77
PUDP-203ENST00000424830 XRCC5P13010 732 aaKnown RBP19.83■□□□□ 0.77
PUDP-203ENST00000424830 SYN1P17600 705 aa19.83■□□□□ 0.77
PUDP-203ENST00000424830 HOXA7P31268 230 aaPredicted RBP19.83■□□□□ 0.77
PUDP-203ENST00000424830 MCAMP43121 646 aa19.83■□□□□ 0.77
PUDP-203ENST00000424830 MAGEA10P43363 369 aaPredicted RBP19.83■□□□□ 0.77
PUDP-203ENST00000424830 HERVK_113P62684 666 aa19.83■□□□□ 0.77
PUDP-203ENST00000424830 MAP3K21Q5TCX8 1036 aa19.83■□□□□ 0.77
PUDP-203ENST00000424830 CCAR1Q8IX12 1150 aaKnown RBP19.83■□□□□ 0.77
PUDP-203ENST00000424830 CRACR2BQ8N4Y2 399 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms