RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 UBE3CQ15386 1083 aa22.57■■□□□ 1.2
PRNP-202ENST00000424424 FOXP4Q8IVH2 680 aaPredicted RBP22.57■■□□□ 1.2
PRNP-202ENST00000424424 CRACR2BQ8N4Y2 399 aaPredicted RBP22.57■■□□□ 1.2
PRNP-202ENST00000424424 MS4A4AQ96JQ5 239 aa22.57■■□□□ 1.2
PRNP-202ENST00000424424 PALD1Q9ULE6 856 aa22.57■■□□□ 1.2
PRNP-202ENST00000424424 CCL15-CCL14A0A0B4J2E2 113 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 IRF6O14896 467 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 CETPP11597 493 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 IRX6P78412 446 aaPredicted RBP22.56■■□□□ 1.2
PRNP-202ENST00000424424 SNAPC2Q13487 334 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 CCL15Q16663 113 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 LRRFIP1Q32MZ4 808 aaKnown RBP22.56■■□□□ 1.2
PRNP-202ENST00000424424 SMC5Q8IY18 1101 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 KBTBD3Q8NAB2 608 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 SAP30BPQ9UHR5 308 aaKnown RBP22.56■■□□□ 1.2
PRNP-202ENST00000424424 ATAD5Q96QE3 1844 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 NAV1Q8NEY1 1877 aa22.56■■□□□ 1.2
PRNP-202ENST00000424424 FAM196BA6NMK8 535 aa22.55■■□□□ 1.2
PRNP-202ENST00000424424 TBC1D8O95759 1140 aa22.55■■□□□ 1.2
PRNP-202ENST00000424424 TTC6Q86TZ1 520 aa22.55■■□□□ 1.2
PRNP-202ENST00000424424 OTUD7AQ8TE49 926 aaPredicted RBP22.55■■□□□ 1.2
PRNP-202ENST00000424424 SIPA1L1O43166 1804 aa22.54■■□□□ 1.2
PRNP-202ENST00000424424 IGF2BP3O00425 579 aaKnown RBP eCLIP22.54■■□□□ 1.2
PRNP-202ENST00000424424 IGHDP01880 384 aa22.54■■□□□ 1.2
PRNP-202ENST00000424424 SLURP2P0DP57 97 aa22.54■■□□□ 1.2
PRNP-202ENST00000424424 B4GALNT3Q6L9W6 998 aa22.54■■□□□ 1.2
PRNP-202ENST00000424424 PI4K2BQ8TCG2 481 aa22.54■■□□□ 1.2
PRNP-202ENST00000424424 CFHR5Q9BXR6 569 aa22.54■■□□□ 1.2
PRNP-202ENST00000424424 ZFYP08048 801 aaPredicted RBP22.53■■□□□ 1.2
PRNP-202ENST00000424424 PTPRAP18433 802 aa22.53■■□□□ 1.2
PRNP-202ENST00000424424 LCORLQ8N3X6 602 aa22.53■■□□□ 1.2
PRNP-202ENST00000424424 BRI3BPQ8WY22 251 aa22.53■■□□□ 1.2
PRNP-202ENST00000424424 ARMT1Q9H993 441 aa22.53■■□□□ 1.2
PRNP-202ENST00000424424 ZHX2Q9Y6X8 837 aa22.53■■□□□ 1.2
PRNP-202ENST00000424424 MBD4O95243 580 aa22.52■■□□□ 1.2
PRNP-202ENST00000424424 POLR3DP05423 398 aaPredicted RBP22.52■■□□□ 1.2
PRNP-202ENST00000424424 METTL16Q86W50 562 aaKnown RBP22.52■■□□□ 1.2
PRNP-202ENST00000424424 PTPN18Q99952 460 aa22.52■■□□□ 1.2
PRNP-202ENST00000424424 LNPKQ9C0E8 428 aa22.52■■□□□ 1.2
PRNP-202ENST00000424424 SALL3Q9BXA9 1300 aa22.52■■□□□ 1.2
PRNP-202ENST00000424424 CXCL11O14625 94 aa22.51■■□□□ 1.19
PRNP-202ENST00000424424 CAP2P40123 477 aa22.51■■□□□ 1.19
PRNP-202ENST00000424424 SLC4A8Q2Y0W8 1093 aa22.51■■□□□ 1.19
PRNP-202ENST00000424424 SLFNL1Q499Z3 407 aa22.51■■□□□ 1.19
PRNP-202ENST00000424424 NOM1Q5C9Z4 860 aaKnown RBP22.51■■□□□ 1.19
PRNP-202ENST00000424424 DDRGK1Q96HY6 314 aa22.51■■□□□ 1.19
PRNP-202ENST00000424424 STAP2Q9UGK3 403 aa22.51■■□□□ 1.19
PRNP-202ENST00000424424 KCNH4Q9UQ05 1017 aa22.51■■□□□ 1.19
PRNP-202ENST00000424424 PHIPQ8WWQ0 1821 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 GPR25O00155 361 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 RNF113AO15541 343 aaKnown RBP22.5■■□□□ 1.19
PRNP-202ENST00000424424 PDE1AP54750 535 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 CHD1LQ86WJ1 897 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 SDR42E1Q8WUS8 393 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 TBC1D2Q9BYX2 928 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 EHD4Q9H223 541 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 ZCCHC17Q9NP64 241 aaKnown RBP22.5■■□□□ 1.19
PRNP-202ENST00000424424 ATP8A2Q9NTI2 1148 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 MCM9Q9NXL9 1143 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 SERPINB13Q9UIV8 391 aa22.5■■□□□ 1.19
PRNP-202ENST00000424424 NUCB1Q02818 461 aa22.49■■□□□ 1.19
PRNP-202ENST00000424424 APPBP2Q92624 585 aa22.49■■□□□ 1.19
PRNP-202ENST00000424424 FSD1Q9BTV5 496 aa22.49■■□□□ 1.19
PRNP-202ENST00000424424 PUS7LQ9H0K6 701 aaKnown RBP22.49■■□□□ 1.19
PRNP-202ENST00000424424 DCP1AQ9NPI6 582 aaPredicted RBP22.49■■□□□ 1.19
PRNP-202ENST00000424424 AFG3L2Q9Y4W6 797 aa22.49■■□□□ 1.19
PRNP-202ENST00000424424 DDX60LQ5H9U9 1706 aaKnown RBP22.48■■□□□ 1.19
PRNP-202ENST00000424424 CHGBP05060 677 aa22.48■■□□□ 1.19
PRNP-202ENST00000424424 ASNSP08243 561 aa22.48■■□□□ 1.19
PRNP-202ENST00000424424 TAF1CQ15572 869 aaPredicted RBP22.48■■□□□ 1.19
PRNP-202ENST00000424424 AMOTL1Q8IY63 956 aa22.48■■□□□ 1.19
PRNP-202ENST00000424424 AS3MTQ9HBK9 375 aa22.48■■□□□ 1.19
PRNP-202ENST00000424424 ZFYVE28Q9HCC9 887 aa22.48■■□□□ 1.19
PRNP-202ENST00000424424 GINM1Q9NU53 330 aa22.48■■□□□ 1.19
PRNP-202ENST00000424424 SLC4A4Q9Y6R1 1079 aa22.48■■□□□ 1.19
PRNP-202ENST00000424424 BAZ2AQ9UIF9 1905 aaKnown RBP22.48■■□□□ 1.19
PRNP-202ENST00000424424 PTPRFP10586 1907 aa22.47■■□□□ 1.19
PRNP-202ENST00000424424 USP17L5A8MUK1 530 aa22.47■■□□□ 1.19
PRNP-202ENST00000424424 BTBD19C9JJ37 291 aa22.47■■□□□ 1.19
PRNP-202ENST00000424424 FKTNO75072 461 aa22.47■■□□□ 1.19
PRNP-202ENST00000424424 CRHR2Q13324 411 aa22.47■■□□□ 1.19
PRNP-202ENST00000424424 FASTKD5Q7L8L6 764 aaKnown RBP22.47■■□□□ 1.19
PRNP-202ENST00000424424 FAM43AQ8N2R8 423 aa22.47■■□□□ 1.19
PRNP-202ENST00000424424 ZNF296Q8WUU4 475 aaPredicted RBP22.47■■□□□ 1.19
PRNP-202ENST00000424424 DNAJC18Q9H819 358 aa22.47■■□□□ 1.19
PRNP-202ENST00000424424 PRKAB2O43741 272 aa22.46■■□□□ 1.19
PRNP-202ENST00000424424 ANKRD23Q86SG2 305 aa22.46■■□□□ 1.19
PRNP-202ENST00000424424 EVI5LQ96CN4 794 aa22.46■■□□□ 1.19
PRNP-202ENST00000424424 R3HDMLQ9H3Y0 253 aa22.46■■□□□ 1.19
PRNP-202ENST00000424424 MYH8P13535 1937 aa22.45■■□□□ 1.18
PRNP-202ENST00000424424 A0A0G2JLL6 359 aaPredicted RBP22.45■■□□□ 1.18
PRNP-202ENST00000424424 TRIM75PA6NK02 468 aa22.45■■□□□ 1.18
PRNP-202ENST00000424424 PLCD1P51178 756 aa22.45■■□□□ 1.18
PRNP-202ENST00000424424 RRP1BQ14684 758 aaKnown RBP22.45■■□□□ 1.18
PRNP-202ENST00000424424 PRRT2Q7Z6L0 340 aaPredicted RBP22.45■■□□□ 1.18
PRNP-202ENST00000424424 ZNF280CQ8ND82 737 aa22.45■■□□□ 1.18
PRNP-202ENST00000424424 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.45■■□□□ 1.18
PRNP-202ENST00000424424 CERKLQ49MI3 558 aaPredicted RBP22.44■■□□□ 1.18
PRNP-202ENST00000424424 TATDN1Q6P1N9 297 aa22.44■■□□□ 1.18
PRNP-202ENST00000424424 GADL1Q6ZQY3 521 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms