RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 AFG3L2Q9Y4W6 797 aa18.85■□□□□ 0.61
SPC24-201ENST00000423327 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
SPC24-201ENST00000423327 GPAT2Q6NUI2 795 aa18.84■□□□□ 0.61
SPC24-201ENST00000423327 ANKRD23Q86SG2 305 aa18.84■□□□□ 0.61
SPC24-201ENST00000423327 DNAJC2Q99543 621 aaKnown RBP18.84■□□□□ 0.61
SPC24-201ENST00000423327 RIOK1Q9BRS2 568 aaKnown RBP18.84■□□□□ 0.61
SPC24-201ENST00000423327 ZFYVE28Q9HCC9 887 aa18.84■□□□□ 0.61
SPC24-201ENST00000423327 ZHX2Q9Y6X8 837 aa18.84■□□□□ 0.61
SPC24-201ENST00000423327 NAV1Q8NEY1 1877 aa18.84■□□□□ 0.61
SPC24-201ENST00000423327 LOC285556D6RIA3 1793 aa18.83■□□□□ 0.61
SPC24-201ENST00000423327 MYH7P12883 1935 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 A0A0G2JLL6 359 aaPredicted RBP18.83■□□□□ 0.6
SPC24-201ENST00000423327 TCRBV5S4A2TA0A5A2 114 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 GOLIM4O00461 696 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 CXCL11O14625 94 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 TLR2O60603 784 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 PDE6AP16499 860 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 JAG1P78504 1218 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 SP3Q02447 781 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 MAP3K12Q12852 859 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 PKN2Q16513 984 aaKnown RBP18.83■□□□□ 0.6
SPC24-201ENST00000423327 SHROOM1Q2M3G4 852 aaPredicted RBP18.83■□□□□ 0.6
SPC24-201ENST00000423327 FBXO46Q6PJ61 603 aaPredicted RBP18.83■□□□□ 0.6
SPC24-201ENST00000423327 PRRT2Q7Z6L0 340 aaPredicted RBP18.83■□□□□ 0.6
SPC24-201ENST00000423327 METTL16Q86W50 562 aaKnown RBP18.83■□□□□ 0.6
SPC24-201ENST00000423327 LRRCC1Q9C099 1032 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 BOLA2Q9H3K6 86 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 PICK1Q9NRD5 415 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 PALD1Q9ULE6 856 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 TRIM17Q9Y577 477 aa18.83■□□□□ 0.6
SPC24-201ENST00000423327 CHGBP05060 677 aa18.82■□□□□ 0.6
SPC24-201ENST00000423327 ATP5JP18859 108 aa18.82■□□□□ 0.6
SPC24-201ENST00000423327 SLC4A8Q2Y0W8 1093 aa18.82■□□□□ 0.6
SPC24-201ENST00000423327 SLFNL1Q499Z3 407 aa18.82■□□□□ 0.6
SPC24-201ENST00000423327 ERO1AQ96HE7 468 aa18.82■□□□□ 0.6
SPC24-201ENST00000423327 DHX36Q9H2U1 1008 aaKnown RBP18.82■□□□□ 0.6
SPC24-201ENST00000423327 PI4KBQ9UBF8 816 aa18.82■□□□□ 0.6
SPC24-201ENST00000423327 SAP30BPQ9UHR5 308 aaKnown RBP18.82■□□□□ 0.6
SPC24-201ENST00000423327 CENPFP49454 3210 aa18.81■□□□□ 0.6
SPC24-201ENST00000423327 PDHXO00330 501 aa18.81■□□□□ 0.6
SPC24-201ENST00000423327 CAP2P40123 477 aa18.81■□□□□ 0.6
SPC24-201ENST00000423327 TTF1Q15361 905 aaPredicted RBP18.81■□□□□ 0.6
SPC24-201ENST00000423327 ARHGAP39Q9C0H5 1083 aa18.81■□□□□ 0.6
SPC24-201ENST00000423327 HERC5Q9UII4 1024 aaKnown RBP18.81■□□□□ 0.6
SPC24-201ENST00000423327 ZNF532Q9HCE3 1301 aa18.8■□□□□ 0.6
SPC24-201ENST00000423327 TRIM75PA6NK02 468 aa18.8■□□□□ 0.6
SPC24-201ENST00000423327 RGS19P49795 217 aa18.8■□□□□ 0.6
SPC24-201ENST00000423327 SLC9C2Q5TAH2 1124 aa18.8■□□□□ 0.6
SPC24-201ENST00000423327 TMED8Q6PL24 325 aaPredicted RBP18.8■□□□□ 0.6
SPC24-201ENST00000423327 C17orf99Q6UX52 265 aa18.8■□□□□ 0.6
SPC24-201ENST00000423327 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
SPC24-201ENST00000423327 HAUS7Q99871 368 aa18.8■□□□□ 0.6
SPC24-201ENST00000423327 PAG1Q9NWQ8 432 aa18.8■□□□□ 0.6
SPC24-201ENST00000423327 CTGFP29279 349 aa18.79■□□□□ 0.6
SPC24-201ENST00000423327 SOX10P56693 466 aa18.79■□□□□ 0.6
SPC24-201ENST00000423327 EVX2Q03828 476 aa18.79■□□□□ 0.6
SPC24-201ENST00000423327 CPA4Q9UI42 421 aa18.79■□□□□ 0.6
SPC24-201ENST00000423327 CYP2C8P10632 490 aa18.78■□□□□ 0.6
SPC24-201ENST00000423327 TSHZ3Q63HK5 1081 aa18.78■□□□□ 0.6
SPC24-201ENST00000423327 LCORLQ8N3X6 602 aa18.78■□□□□ 0.6
SPC24-201ENST00000423327 EFCC1Q9HA90 598 aa18.78■□□□□ 0.6
SPC24-201ENST00000423327 PTPN22Q9Y2R2 807 aa18.78■□□□□ 0.6
SPC24-201ENST00000423327 BRCA2P51587 3418 aa18.78■□□□□ 0.6
SPC24-201ENST00000423327 MAGEB6P1A0A0J9YX57 407 aa18.77■□□□□ 0.6
SPC24-201ENST00000423327 GDF11O95390 407 aa18.77■□□□□ 0.6
SPC24-201ENST00000423327 ADD2P35612 726 aa18.77■□□□□ 0.6
SPC24-201ENST00000423327 USP5P45974 858 aa18.77■□□□□ 0.6
SPC24-201ENST00000423327 LACTBP83111 547 aaPredicted RBP18.77■□□□□ 0.6
SPC24-201ENST00000423327 TREML2Q5T2D2 321 aa18.77■□□□□ 0.6
SPC24-201ENST00000423327 GADL1Q6ZQY3 521 aa18.77■□□□□ 0.6
SPC24-201ENST00000423327 CERS3Q8IU89 383 aa18.77■□□□□ 0.6
SPC24-201ENST00000423327 BCRP11274 1271 aa18.76■□□□□ 0.59
SPC24-201ENST00000423327 FOXP4Q8IVH2 680 aaPredicted RBP18.76■□□□□ 0.59
SPC24-201ENST00000423327 BAZ2AQ9UIF9 1905 aaKnown RBP18.75■□□□□ 0.59
SPC24-201ENST00000423327 HLA-DOAP06340 250 aa18.75■□□□□ 0.59
SPC24-201ENST00000423327 PLCD1P51178 756 aa18.75■□□□□ 0.59
SPC24-201ENST00000423327 SPP2Q13103 211 aa18.75■□□□□ 0.59
SPC24-201ENST00000423327 FASTKD5Q7L8L6 764 aaKnown RBP18.75■□□□□ 0.59
SPC24-201ENST00000423327 ZNF280CQ8ND82 737 aa18.75■□□□□ 0.59
SPC24-201ENST00000423327 SDR42E1Q8WUS8 393 aa18.75■□□□□ 0.59
SPC24-201ENST00000423327 PARK7Q99497 189 aaKnown RBP18.75■□□□□ 0.59
SPC24-201ENST00000423327 ECHDC1Q9NTX5 307 aa18.75■□□□□ 0.59
SPC24-201ENST00000423327 AGTPBP1Q9UPW5 1226 aa18.75■□□□□ 0.59
SPC24-201ENST00000423327 MGAMO43451 1857 aa18.75■□□□□ 0.59
SPC24-201ENST00000423327 USP17L5A8MUK1 530 aa18.74■□□□□ 0.59
SPC24-201ENST00000423327 ECM2O94769 699 aaPredicted RBP18.74■□□□□ 0.59
SPC24-201ENST00000423327 HMGCS2P54868 508 aa18.74■□□□□ 0.59
SPC24-201ENST00000423327 TATDN1Q6P1N9 297 aa18.74■□□□□ 0.59
SPC24-201ENST00000423327 CRACR2BQ8N4Y2 399 aaPredicted RBP18.74■□□□□ 0.59
SPC24-201ENST00000423327 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
SPC24-201ENST00000423327 EHD4Q9H223 541 aa18.74■□□□□ 0.59
SPC24-201ENST00000423327 ARMT1Q9H993 441 aa18.74■□□□□ 0.59
SPC24-201ENST00000423327 ZBTB21Q9ULJ3 1066 aa18.74■□□□□ 0.59
SPC24-201ENST00000423327 SLC45A1Q9Y2W3 748 aa18.74■□□□□ 0.59
SPC24-201ENST00000423327 PTCH2Q9Y6C5 1203 aa18.74■□□□□ 0.59
SPC24-201ENST00000423327 PRKAB2O43741 272 aa18.73■□□□□ 0.59
SPC24-201ENST00000423327 MBD4O95243 580 aa18.73■□□□□ 0.59
SPC24-201ENST00000423327 GABPAQ06546 454 aa18.73■□□□□ 0.59
SPC24-201ENST00000423327 SH3D19Q5HYK7 790 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms