RNA–Protein interactions for RNA: ENST00000423108.5

RPUSD3-203, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-203ENST00000423108 TNNI2P48788 182 aa15.01□□□□□ -0.01
RPUSD3-203ENST00000423108 AKNAD1Q5T1N1 836 aa15.01□□□□□ -0.01
RPUSD3-203ENST00000423108 METTL16Q86W50 562 aaKnown RBP15.01□□□□□ -0.01
RPUSD3-203ENST00000423108 DHX36Q9H2U1 1008 aaKnown RBP15.01□□□□□ -0.01
RPUSD3-203ENST00000423108 DNAJC18Q9H819 358 aa15.01□□□□□ -0.01
RPUSD3-203ENST00000423108 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
RPUSD3-203ENST00000423108 PI4KBQ9UBF8 816 aa15.01□□□□□ -0.01
RPUSD3-203ENST00000423108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.01□□□□□ -0.01
RPUSD3-203ENST00000423108 POLR2AP24928 1970 aaKnown RBP15□□□□□ -0.01
RPUSD3-203ENST00000423108 PRDM1O75626 825 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 MCCP23508 829 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 CDK8P49336 464 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 TNFAIP1Q13829 316 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 RRP1BQ14684 758 aaKnown RBP15□□□□□ -0.01
RPUSD3-203ENST00000423108 RNF20Q5VTR2 975 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 MAP1SQ66K74 1059 aaPredicted RBP15□□□□□ -0.01
RPUSD3-203ENST00000423108 KRT26Q7Z3Y9 468 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 FOXP4Q8IVH2 680 aaPredicted RBP15□□□□□ -0.01
RPUSD3-203ENST00000423108 STAG1Q8WVM7 1258 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 CSRNP1Q96S65 589 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 GLIS2Q9BZE0 524 aaPredicted RBP15□□□□□ -0.01
RPUSD3-203ENST00000423108 FOCADQ5VW36 1801 aa15□□□□□ -0.01
RPUSD3-203ENST00000423108 COL2A1P02458 1487 aaPredicted RBP15□□□□□ -0.01
RPUSD3-203ENST00000423108 NEDD4P46934 1319 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 HLA-DOAP06340 250 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 CPA1P15085 419 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 SHMT1P34896 483 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 MAP3K10Q02779 954 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 FMR1Q06787 632 aaKnown RBP eCLIP14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 C16orf86Q6ZW13 317 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 MIGA2Q7L4E1 593 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 SULF1Q8IWU6 871 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 EHD4Q9H223 541 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 SERPINB13Q9UIV8 391 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 DDX60LQ5H9U9 1706 aaKnown RBP14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 NAV1Q8NEY1 1877 aa14.99□□□□□ -0.01
RPUSD3-203ENST00000423108 ROBO3Q96MS0 1386 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 MYH1P12882 1939 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 KIF3CO14782 793 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 ORC4O43929 436 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 ANAPC15P60006 121 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 MFSD6Q6ZSS7 791 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 LDHDQ86WU2 507 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 AMOTL1Q8IY63 956 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 JAKMIP1Q96N16 626 aaKnown RBP14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 PPP2R3BQ9Y5P8 575 aa14.98□□□□□ -0.01
RPUSD3-203ENST00000423108 B4E1Z4 1266 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 TRAF5O00463 557 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 TBC1D12O60347 775 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 RASA1P20936 1047 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 JAG1P78504 1218 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 SHROOM1Q2M3G4 852 aaPredicted RBP14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 RRP12Q5JTH9 1297 aaKnown RBP14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 CYB5R4Q7L1T6 521 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 CDC37L1Q7L3B6 337 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 MB21D2Q8IYB1 491 aaPredicted RBP14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 CDCA5Q96FF9 252 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 GPBP1L1Q9HC44 474 aaPredicted RBP14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 FZD1Q9UP38 647 aa14.97□□□□□ -0.01
RPUSD3-203ENST00000423108 SIPA1L1O43166 1804 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 SSC5DA1L4H1 1573 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 SLC3A2P08195 630 aaKnown RBP14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 ANTXR2P58335 489 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 EXOSC10Q01780 885 aaKnown RBP14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 KRT32Q14532 448 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 FAM47AQ5JRC9 791 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 TATDN1Q6P1N9 297 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 CHST3Q7LGC8 479 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 CRACR2BQ8N4Y2 399 aaPredicted RBP14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 TCEANC2Q96MN5 208 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 UPF3BQ9BZI7 483 aaKnown RBP14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 TM6SF1Q9BZW5 370 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 RNF41Q9H4P4 317 aaPredicted RBP14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 ZSWIM6Q9HCJ5 1215 aa14.96□□□□□ -0.01
RPUSD3-203ENST00000423108 PHF20L1A8MW92 1017 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 KDM4AO75164 1064 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 AKR1B1P15121 316 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 CASTP20810 708 aaKnown RBP14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 PDE4BQ07343 736 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 NCOA7Q8NI08 942 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 MKNK2Q9HBH9 465 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 GPHNQ9NQX3 736 aaPredicted RBP14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 TOMM22Q9NS69 142 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 ZSWIM5Q9P217 1185 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 SWAP70Q9UH65 585 aa14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 HERC5Q9UII4 1024 aaKnown RBP14.95□□□□□ -0.02
RPUSD3-203ENST00000423108 RANBP6O60518 1105 aaKnown RBP14.94□□□□□ -0.02
RPUSD3-203ENST00000423108 USP2O75604 605 aaPredicted RBP14.94□□□□□ -0.02
RPUSD3-203ENST00000423108 ITGBL1O95965 494 aaPredicted RBP14.94□□□□□ -0.02
RPUSD3-203ENST00000423108 TFAP4Q01664 338 aa14.94□□□□□ -0.02
RPUSD3-203ENST00000423108 SUPT20HL1Q3ZLR7 823 aa14.94□□□□□ -0.02
RPUSD3-203ENST00000423108 ZNF444Q8N0Y2 327 aaPredicted RBP14.94□□□□□ -0.02
RPUSD3-203ENST00000423108 LRRC2Q9BYS8 371 aa14.94□□□□□ -0.02
RPUSD3-203ENST00000423108 KRT23Q9C075 422 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms