RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CHMLP26374 656 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 CYP4F22Q6NT55 531 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 ZNF589Q86UQ0 364 aaPredicted RBP11.12□□□□□ -0.63
PDGFC-202ENST00000422544 ZIC5Q96T25 663 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 DHX36Q9H2U1 1008 aaKnown RBP11.12□□□□□ -0.63
PDGFC-202ENST00000422544 ATP8A2Q9NTI2 1148 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 MCM9Q9NXL9 1143 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 ABT1Q9ULW3 272 aaKnown RBP11.12□□□□□ -0.63
PDGFC-202ENST00000422544 ANGEL1Q9UNK9 670 aaKnown RBP11.12□□□□□ -0.63
PDGFC-202ENST00000422544 MAST2Q6P0Q8 1798 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 POLR3DP05423 398 aaPredicted RBP11.11□□□□□ -0.63
PDGFC-202ENST00000422544 CYP2D6P10635 497 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 GNAT2P19087 354 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 PLCD1P51178 756 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 VPS53Q5VIR6 699 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 ARMC9Q7Z3E5 817 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 SAPCD2Q86UD0 394 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 HOOK2Q96ED9 719 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 CAPNS2Q96L46 248 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 MCOLN1Q9GZU1 580 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 PI4KBQ9UBF8 816 aa11.11□□□□□ -0.63
PDGFC-202ENST00000422544 RPAP1Q9BWH6 1393 aaPredicted RBP11.11□□□□□ -0.63
PDGFC-202ENST00000422544 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 USP17L21D6R901 530 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 HLA-DOAP06340 250 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 HUNKP57058 714 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 FKBP1BP68106 108 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 EVX2Q03828 476 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 DCAF15Q66K64 600 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 TTC6Q86TZ1 520 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 FOXP4Q8IVH2 680 aaPredicted RBP11.1□□□□□ -0.63
PDGFC-202ENST00000422544 IFNL3Q8IZI9 196 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 ZNF341Q9BYN7 854 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 IL25Q9H293 177 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.63
PDGFC-202ENST00000422544 EPB41L4AQ9HCS5 686 aaPredicted RBP11.1□□□□□ -0.63
PDGFC-202ENST00000422544 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
PDGFC-202ENST00000422544 TLL2Q9Y6L7 1015 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 ATRNL1Q5VV63 1379 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 SSC5DA1L4H1 1573 aa11.1□□□□□ -0.63
PDGFC-202ENST00000422544 CCDC171Q6TFL3 1326 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 SMIM22K7EJ46 135 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 FOXP2O15409 715 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 TBC1D12O60347 775 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 HSPD1P10809 573 aaKnown RBP11.09□□□□□ -0.63
PDGFC-202ENST00000422544 IREB2P48200 963 aaKnown RBP11.09□□□□□ -0.63
PDGFC-202ENST00000422544 TDO2P48775 406 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 MAP2K1Q02750 393 aaPredicted RBP11.09□□□□□ -0.63
PDGFC-202ENST00000422544 MAP3K10Q02779 954 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 MAP3K11Q16584 847 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 LDLRAD1Q5T700 205 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 GIMAP6Q6P9H5 292 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 CTR9Q6PD62 1173 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 CRACR2BQ8N4Y2 399 aaPredicted RBP11.09□□□□□ -0.63
PDGFC-202ENST00000422544 RUFY2Q8WXA3 655 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 NACAP1Q9BZK3 213 aa11.09□□□□□ -0.63
PDGFC-202ENST00000422544 PHF20L1A8MW92 1017 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 MINDY4BA8MYZ0 360 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 CDC45O75419 566 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 MFAP1P55081 439 aaKnown RBP11.08□□□□□ -0.64
PDGFC-202ENST00000422544 C12orf60Q5U649 245 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
PDGFC-202ENST00000422544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDGFC-202ENST00000422544 ZKSCAN4Q969J2 545 aaPredicted RBP11.08□□□□□ -0.64
PDGFC-202ENST00000422544 DYNLL2Q96FJ2 89 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 CLMNQ96JQ2 1002 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 WRNIP1Q96S55 665 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 NAPBQ9H115 298 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
PDGFC-202ENST00000422544 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 ZNF112Q9UJU3 913 aa11.08□□□□□ -0.64
PDGFC-202ENST00000422544 ECM29Q5VYK3 1845 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
PDGFC-202ENST00000422544 SGSM2O43147 1006 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 FGAP02671 866 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 INPP5BP32019 993 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 ZNF157P51786 506 aaPredicted RBP11.07□□□□□ -0.64
PDGFC-202ENST00000422544 VGLL4Q14135 290 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 RRP1BQ14684 758 aaKnown RBP11.07□□□□□ -0.64
PDGFC-202ENST00000422544 SBK1Q52WX2 424 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.07□□□□□ -0.64
PDGFC-202ENST00000422544 PAXIP1Q6ZW49 1069 aaPredicted RBP11.07□□□□□ -0.64
PDGFC-202ENST00000422544 AMOTL1Q8IY63 956 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 ANKRD13AQ8IZ07 590 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 STK11IPQ8N1F8 1099 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 EHD4Q9H223 541 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 DNAJC18Q9H819 358 aa11.07□□□□□ -0.64
PDGFC-202ENST00000422544 ARPP21Q9UBL0 812 aaPredicted RBP11.07□□□□□ -0.64
PDGFC-202ENST00000422544 GABPAQ06546 454 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 GRM1Q13255 1194 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 ALX1Q15699 326 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 RGMBQ6NW40 437 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 SLC10A4Q96EP9 437 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms