RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 METAP2P50579 478 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHRD-204ENST00000420973 MMS22LQ6ZRQ5 1243 aa16.6■□□□□ 0.25
CHRD-204ENST00000420973 NSUN7Q8NE18 718 aaKnown RBP16.6■□□□□ 0.25
CHRD-204ENST00000420973 ECM2O94769 699 aaPredicted RBP16.6■□□□□ 0.25
CHRD-204ENST00000420973 TRIM37O94972 964 aa16.6■□□□□ 0.25
CHRD-204ENST00000420973 SEC31AO94979 1220 aaKnown RBP16.6■□□□□ 0.25
CHRD-204ENST00000420973 UBXN4Q92575 508 aa16.6■□□□□ 0.25
CHRD-204ENST00000420973 SLC26A6Q9BXS9 759 aa16.6■□□□□ 0.25
CHRD-204ENST00000420973 AATFQ9NY61 560 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHRD-204ENST00000420973 MRC1P22897 1456 aa16.59■□□□□ 0.25
CHRD-204ENST00000420973 USP54Q70EL1 1684 aa16.59■□□□□ 0.25
CHRD-204ENST00000420973 BIN1O00499 593 aa16.59■□□□□ 0.25
CHRD-204ENST00000420973 PARP10Q53GL7 1025 aa16.59■□□□□ 0.25
CHRD-204ENST00000420973 SDF4Q9BRK5 362 aa16.59■□□□□ 0.25
CHRD-204ENST00000420973 GNL3LQ9NVN8 582 aaKnown RBP16.59■□□□□ 0.25
CHRD-204ENST00000420973 GOLGA8AA7E2F4 631 aa16.59■□□□□ 0.25
CHRD-204ENST00000420973 F8W031 263 aaPredicted RBP16.59■□□□□ 0.25
CHRD-204ENST00000420973 RAD21O60216 631 aa16.59■□□□□ 0.25
CHRD-204ENST00000420973 SETQ01105 290 aaPredicted RBP16.59■□□□□ 0.25
CHRD-204ENST00000420973 ERICH2A1L162 156 aa16.58■□□□□ 0.25
CHRD-204ENST00000420973 IVLP07476 585 aa16.58■□□□□ 0.25
CHRD-204ENST00000420973 MFSD6Q6ZSS7 791 aa16.58■□□□□ 0.25
CHRD-204ENST00000420973 NACAP1Q9BZK3 213 aa16.58■□□□□ 0.25
CHRD-204ENST00000420973 CCDC189A1A4V9 331 aa16.58■□□□□ 0.24
CHRD-204ENST00000420973 EPB41L2O43491 1005 aaKnown RBP16.58■□□□□ 0.24
CHRD-204ENST00000420973 NAIF1Q69YI7 327 aaPredicted RBP16.58■□□□□ 0.24
CHRD-204ENST00000420973 CYB5R4Q7L1T6 521 aa16.58■□□□□ 0.24
CHRD-204ENST00000420973 LEO1Q8WVC0 666 aaPredicted RBP16.58■□□□□ 0.24
CHRD-204ENST00000420973 NTSR2O95665 410 aa16.58■□□□□ 0.24
CHRD-204ENST00000420973 IFNL3Q8IZI9 196 aa16.58■□□□□ 0.24
CHRD-204ENST00000420973 USP28Q96RU2 1077 aa16.58■□□□□ 0.24
CHRD-204ENST00000420973 MROH5Q6ZUA9 1318 aa16.58■□□□□ 0.24
CHRD-204ENST00000420973 XIRP1Q702N8 1843 aaKnown RBP16.57■□□□□ 0.24
CHRD-204ENST00000420973 UTRNP46939 3433 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 NR1I2O75469 434 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 ACTN2P35609 894 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
CHRD-204ENST00000420973 TPTE2Q6XPS3 522 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 ARHGEF1Q92888 912 aaKnown RBP16.57■□□□□ 0.24
CHRD-204ENST00000420973 UBAC1Q9BSL1 405 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 SLC12A7Q9Y666 1083 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 RPS8P62241 208 aaKnown RBP16.57■□□□□ 0.24
CHRD-204ENST00000420973 SMC1AQ14683 1233 aaKnown RBP16.57■□□□□ 0.24
CHRD-204ENST00000420973 CCDC73Q6ZRK6 1079 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 CCDC196A0A1B0GTZ2 297 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 SMC2O95347 1197 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 HSPA1LP34931 641 aa16.57■□□□□ 0.24
CHRD-204ENST00000420973 DHX8Q14562 1220 aaKnown RBP16.57■□□□□ 0.24
CHRD-204ENST00000420973 NAA16Q6N069 864 aaPredicted RBP16.57■□□□□ 0.24
CHRD-204ENST00000420973 A0A1B0GVL5 298 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 AP5Z1O43299 807 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 TSGA10IPQ3SY00 556 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 TRAPPC3LQ5T215 181 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 SEPT12Q8IYM1 358 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 PLEKHA4Q9H4M7 779 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 CDHR2Q9BYE9 1310 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 NEDD4P46934 1319 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 CTDNEP1O95476 244 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 TRIM29Q14134 588 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 SPECC1Q5M775 1068 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 GBP6Q6ZN66 633 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 LUZP1Q86V48 1076 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 IRAK4Q9NWZ3 460 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 ROBO1Q9Y6N7 1651 aa16.56■□□□□ 0.24
CHRD-204ENST00000420973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.55■□□□□ 0.24
CHRD-204ENST00000420973 RIMBP2O15034 1052 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 MAP3K11Q16584 847 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 CCAR1Q8IX12 1150 aaKnown RBP16.55■□□□□ 0.24
CHRD-204ENST00000420973 FSIP1Q8NA03 581 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 SCAND2PQ9GZW5 306 aaPredicted RBP16.55■□□□□ 0.24
CHRD-204ENST00000420973 C6orf229H3BNL8 230 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 ZBTB43O43298 467 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 EVX2Q03828 476 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 MSL1Q68DK7 614 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 FILIP1Q7Z7B0 1213 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 DZIP1Q86YF9 867 aaKnown RBP16.55■□□□□ 0.24
CHRD-204ENST00000420973 PLA2G12BQ9BX93 195 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 FBXO3Q9UK99 471 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 AFF2P51816 1311 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 MAGEB6P1A0A0J9YX57 407 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 PFKFB2O60825 505 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 TXNRD3Q86VQ6 643 aa16.55■□□□□ 0.24
CHRD-204ENST00000420973 STRBPQ96SI9 672 aaKnown RBP16.55■□□□□ 0.24
CHRD-204ENST00000420973 THRAP3Q9Y2W1 955 aaKnown RBP16.55■□□□□ 0.24
CHRD-204ENST00000420973 PRDX5P30044 214 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 FAM47AQ5JRC9 791 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 DNAJC25Q9H1X3 360 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 MINPP1Q9UNW1 487 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 KCNJ14Q9UNX9 436 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 ARFGEF2Q9Y6D5 1785 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 KIF2AO00139 706 aaPredicted RBP16.54■□□□□ 0.24
CHRD-204ENST00000420973 ANTXR2P58335 489 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 ZSWIM5Q9P217 1185 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 ADAM21Q9UKJ8 722 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 FOXP2O15409 715 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 KINO60870 393 aaKnown RBP16.54■□□□□ 0.24
CHRD-204ENST00000420973 ADGRA1Q86SQ6 560 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms