RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 TCERG1O14776 1098 aaKnown RBP8.86□□□□□ -0.99
HMGN1-205ENST00000419378 SPINT1O43278 529 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 ABL1P00519 1130 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 LMNB1P20700 586 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 HOXA10P31260 410 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-205ENST00000419378 PSMA6P60900 246 aaKnown RBP8.86□□□□□ -0.99
HMGN1-205ENST00000419378 EXOSC9Q06265 439 aaKnown RBP8.86□□□□□ -0.99
HMGN1-205ENST00000419378 CCDC93Q567U6 631 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 SLC10A5Q5PT55 438 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 C6orf118Q5T5N4 469 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 SOGA3Q5TF21 947 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 SND1Q7KZF4 910 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGN1-205ENST00000419378 C7orf43Q8WVR3 580 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 RPGRQ92834 1020 aaKnown RBP8.86□□□□□ -0.99
HMGN1-205ENST00000419378 VTI1AQ96AJ9 217 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 C2orf49Q9BVC5 232 aaPredicted RBP8.86□□□□□ -0.99
HMGN1-205ENST00000419378 STK31Q9BXU1 1019 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 TAOK3Q9H2K8 898 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 MYH16Q9H6N6 1097 aa8.86□□□□□ -0.99
HMGN1-205ENST00000419378 TRMT112Q9UI30 125 aaKnown RBP8.86□□□□□ -0.99
HMGN1-205ENST00000419378 LTBP3Q9NS15 1303 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 GFRA3O60609 400 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 DDX58O95786 925 aaKnown RBP8.85□□□□□ -0.99
HMGN1-205ENST00000419378 AVPP01185 164 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 BMP2P12643 396 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 HCLS1P14317 486 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-205ENST00000419378 ALDH1B1P30837 517 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 CTSOP43234 321 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-205ENST00000419378 TRIM28Q13263 835 aaKnown RBP8.85□□□□□ -0.99
HMGN1-205ENST00000419378 OLFM4Q6UX06 510 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 SYNE4Q8N205 404 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 GTF3C2Q8WUA4 911 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-205ENST00000419378 MYD88Q99836 296 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 POLMQ9NP87 494 aaPredicted RBP8.85□□□□□ -0.99
HMGN1-205ENST00000419378 ANO2Q9NQ90 1003 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 SNED1Q8TER0 1413 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 CCDC88AQ3V6T2 1871 aa8.85□□□□□ -0.99
HMGN1-205ENST00000419378 DICER1Q9UPY3 1922 aaKnown RBP8.84□□□□□ -0.99
HMGN1-205ENST00000419378 SOWAHDA6NJG2 315 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 VAMP4O75379 141 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 RNF144AP50876 292 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-205ENST00000419378 ZNF211Q13398 564 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-205ENST00000419378 TMEM214Q6NUQ4 689 aaKnown RBP8.84□□□□□ -0.99
HMGN1-205ENST00000419378 MRPL14Q6P1L8 145 aaKnown RBP8.84□□□□□ -0.99
HMGN1-205ENST00000419378 KSR2Q6VAB6 950 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 G2E3Q7L622 706 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 STAG2Q8N3U4 1231 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 ZDHHC1Q8WTX9 485 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 COL26A1Q96A83 441 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 FAM89AQ96GI7 184 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 RBM17Q96I25 401 aaKnown RBP8.84□□□□□ -0.99
HMGN1-205ENST00000419378 CRAMP1Q96RY5 1269 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 GRIP2Q9C0E4 1043 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 MAP3K2Q9Y2U5 619 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 CEP350Q5VT06 3117 aa8.84□□□□□ -0.99
HMGN1-205ENST00000419378 ABCC4O15439 1325 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 CACNA1FO60840 1977 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 PI4KAP2A4QPH2 592 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 GPC1P35052 558 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 FKBP4Q02790 459 aaKnown RBP eCLIP8.83□□□□□ -1
HMGN1-205ENST00000419378 PKDCCQ504Y2 493 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 SH3PXD2AQ5TCZ1 1133 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 FOXD4L5Q5VV16 416 aaPredicted RBP8.83□□□□□ -1
HMGN1-205ENST00000419378 DIEXFQ68CQ4 756 aaKnown RBP8.83□□□□□ -1
HMGN1-205ENST00000419378 SLC51AQ86UW1 340 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 RTKN2Q8IZC4 609 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 PI4KAP1Q8N8J0 262 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 METTL22Q9BUU2 404 aaPredicted RBP8.83□□□□□ -1
HMGN1-205ENST00000419378 ZNF232Q9UNY5 417 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 CHMP3Q9Y3E7 222 aa8.83□□□□□ -1
HMGN1-205ENST00000419378 DNMT3AQ9Y6K1 912 aaPredicted RBP8.83□□□□□ -1
HMGN1-205ENST00000419378 KDM2BQ8NHM5 1336 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 SERTM1A2A2V5 107 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 EML1O00423 815 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 NRG2O14511 850 aaPredicted RBP8.82□□□□□ -1
HMGN1-205ENST00000419378 IRS4O14654 1257 aaPredicted RBP8.82□□□□□ -1
HMGN1-205ENST00000419378 DGAT1O75907 488 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 BMP1P13497 986 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 NOS2P35228 1153 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 MFAP1P55081 439 aaKnown RBP8.82□□□□□ -1
HMGN1-205ENST00000419378 C1QTNF8P60827 252 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 MTMR3Q13615 1198 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 TEAD4Q15561 434 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 ZBTB38Q8NAP3 1195 aaPredicted RBP8.82□□□□□ -1
HMGN1-205ENST00000419378 CCDC191Q8NCU4 936 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
HMGN1-205ENST00000419378 SAP130Q9H0E3 1048 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 NMRK2Q9NPI5 230 aa8.82□□□□□ -1
HMGN1-205ENST00000419378 ZNF277Q9NRM2 450 aaPredicted RBP8.82□□□□□ -1
HMGN1-205ENST00000419378 CWC25Q9NXE8 425 aaPredicted RBP8.82□□□□□ -1
HMGN1-205ENST00000419378 COL4A1P02462 1669 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 LRRC37AA6NMS7 1700 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 E9PSI1 815 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 PCCAP05165 728 aaPredicted RBP8.81□□□□□ -1
HMGN1-205ENST00000419378 IGKV5-2P06315 115 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 NEXNQ0ZGT2 675 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 GRAPQ13588 217 aa8.81□□□□□ -1
HMGN1-205ENST00000419378 SF3B3Q15393 1217 aaKnown RBP8.81□□□□□ -1
HMGN1-205ENST00000419378 GNASQ5JWF2 1037 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms