RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 PHIPQ8WWQ0 1821 aa24.63■■□□□ 1.53
GTF3A-202ENST00000419181 HDAC1Q13547 482 aaPredicted RBP24.63■■□□□ 1.53
GTF3A-202ENST00000419181 PICK1Q9NRD5 415 aa24.63■■□□□ 1.53
GTF3A-202ENST00000419181 DDX60LQ5H9U9 1706 aaKnown RBP24.63■■□□□ 1.53
GTF3A-202ENST00000419181 ATAD5Q96QE3 1844 aa24.63■■□□□ 1.53
GTF3A-202ENST00000419181 PTPRAP18433 802 aa24.62■■□□□ 1.53
GTF3A-202ENST00000419181 CRHR2Q13324 411 aa24.62■■□□□ 1.53
GTF3A-202ENST00000419181 FAM43AQ8N2R8 423 aa24.62■■□□□ 1.53
GTF3A-202ENST00000419181 GPATCH3Q96I76 525 aa24.62■■□□□ 1.53
GTF3A-202ENST00000419181 PALD1Q9ULE6 856 aa24.62■■□□□ 1.53
GTF3A-202ENST00000419181 MAGEB6P1A0A0J9YX57 407 aa24.61■■□□□ 1.53
GTF3A-202ENST00000419181 CCDC85CA6NKD9 419 aa24.61■■□□□ 1.53
GTF3A-202ENST00000419181 ADD2P35612 726 aa24.61■■□□□ 1.53
GTF3A-202ENST00000419181 METTL16Q86W50 562 aaKnown RBP24.61■■□□□ 1.53
GTF3A-202ENST00000419181 PTPRFP10586 1907 aa24.61■■□□□ 1.53
GTF3A-202ENST00000419181 USP5P45974 858 aa24.6■■□□□ 1.53
GTF3A-202ENST00000419181 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.6■■□□□ 1.53
GTF3A-202ENST00000419181 ZCCHC17Q9NP64 241 aaKnown RBP24.6■■□□□ 1.53
GTF3A-202ENST00000419181 SAP30BPQ9UHR5 308 aaKnown RBP24.6■■□□□ 1.53
GTF3A-202ENST00000419181 ZHX2Q9Y6X8 837 aa24.6■■□□□ 1.53
GTF3A-202ENST00000419181 NAV1Q8NEY1 1877 aa24.6■■□□□ 1.53
GTF3A-202ENST00000419181 BTBD19C9JJ37 291 aa24.59■■□□□ 1.53
GTF3A-202ENST00000419181 CXCL11O14625 94 aa24.59■■□□□ 1.53
GTF3A-202ENST00000419181 FKTNO75072 461 aa24.59■■□□□ 1.53
GTF3A-202ENST00000419181 TSHZ3Q63HK5 1081 aa24.59■■□□□ 1.53
GTF3A-202ENST00000419181 CTU1Q7Z7A3 348 aaKnown RBP24.59■■□□□ 1.53
GTF3A-202ENST00000419181 FOXP4Q8IVH2 680 aaPredicted RBP24.59■■□□□ 1.53
GTF3A-202ENST00000419181 DNAJC18Q9H819 358 aa24.59■■□□□ 1.53
GTF3A-202ENST00000419181 SUPT16HQ9Y5B9 1047 aaKnown RBP24.59■■□□□ 1.53
GTF3A-202ENST00000419181 HLA-DOAP06340 250 aa24.58■■□□□ 1.53
GTF3A-202ENST00000419181 CAP2P40123 477 aa24.58■■□□□ 1.53
GTF3A-202ENST00000419181 MOGSQ13724 837 aa24.58■■□□□ 1.53
GTF3A-202ENST00000419181 RRP1BQ14684 758 aaKnown RBP24.58■■□□□ 1.53
GTF3A-202ENST00000419181 TAF1CQ15572 869 aaPredicted RBP24.58■■□□□ 1.53
GTF3A-202ENST00000419181 GCC1Q96CN9 775 aa24.58■■□□□ 1.53
GTF3A-202ENST00000419181 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.58■■□□□ 1.53
GTF3A-202ENST00000419181 AFG3L2Q9Y4W6 797 aa24.58■■□□□ 1.53
GTF3A-202ENST00000419181 TTC41PQ6P2S7 1318 aa24.58■■□□□ 1.52
GTF3A-202ENST00000419181 UBE3CQ15386 1083 aa24.57■■□□□ 1.52
GTF3A-202ENST00000419181 SLFNL1Q499Z3 407 aa24.57■■□□□ 1.52
GTF3A-202ENST00000419181 LCORLQ8N3X6 602 aa24.57■■□□□ 1.52
GTF3A-202ENST00000419181 EXOC6Q8TAG9 804 aa24.57■■□□□ 1.52
GTF3A-202ENST00000419181 OTUD7AQ8TE49 926 aaPredicted RBP24.57■■□□□ 1.52
GTF3A-202ENST00000419181 CRNKL1Q9BZJ0 848 aaKnown RBP24.57■■□□□ 1.52
GTF3A-202ENST00000419181 CHGBP05060 677 aa24.56■■□□□ 1.52
GTF3A-202ENST00000419181 ANKRD23Q86SG2 305 aa24.56■■□□□ 1.52
GTF3A-202ENST00000419181 CRACR2BQ8N4Y2 399 aaPredicted RBP24.56■■□□□ 1.52
GTF3A-202ENST00000419181 ZFYVE28Q9HCC9 887 aa24.56■■□□□ 1.52
GTF3A-202ENST00000419181 A0A0G2JLL6 359 aaPredicted RBP24.55■■□□□ 1.52
GTF3A-202ENST00000419181 SLC4A8Q2Y0W8 1093 aa24.55■■□□□ 1.52
GTF3A-202ENST00000419181 ZSCAN25Q6NSZ9 544 aa24.55■■□□□ 1.52
GTF3A-202ENST00000419181 PRRT2Q7Z6L0 340 aaPredicted RBP24.55■■□□□ 1.52
GTF3A-202ENST00000419181 CCDC84Q86UT8 332 aaPredicted RBP24.55■■□□□ 1.52
GTF3A-202ENST00000419181 TRIM34Q9BYJ4 488 aa24.55■■□□□ 1.52
GTF3A-202ENST00000419181 EHD4Q9H223 541 aa24.55■■□□□ 1.52
GTF3A-202ENST00000419181 SALL3Q9BXA9 1300 aa24.55■■□□□ 1.52
GTF3A-202ENST00000419181 ANKRD45Q5TZF3 282 aa24.54■■□□□ 1.52
GTF3A-202ENST00000419181 KBTBD3Q8NAB2 608 aa24.54■■□□□ 1.52
GTF3A-202ENST00000419181 PI4K2BQ8TCG2 481 aa24.54■■□□□ 1.52
GTF3A-202ENST00000419181 ARMT1Q9H993 441 aa24.54■■□□□ 1.52
GTF3A-202ENST00000419181 MBD4O95243 580 aa24.53■■□□□ 1.52
GTF3A-202ENST00000419181 MX1P20591 662 aa24.53■■□□□ 1.52
GTF3A-202ENST00000419181 TTC6Q86TZ1 520 aa24.53■■□□□ 1.52
GTF3A-202ENST00000419181 TRIM75PA6NK02 468 aa24.52■■□□□ 1.52
GTF3A-202ENST00000419181 PDHXO00330 501 aa24.52■■□□□ 1.52
GTF3A-202ENST00000419181 ERC2O15083 957 aa24.52■■□□□ 1.52
GTF3A-202ENST00000419181 TLR2O60603 784 aa24.52■■□□□ 1.52
GTF3A-202ENST00000419181 GPAT2Q6NUI2 795 aa24.52■■□□□ 1.52
GTF3A-202ENST00000419181 SDR42E1Q8WUS8 393 aa24.52■■□□□ 1.52
GTF3A-202ENST00000419181 TBC1D2Q9BYX2 928 aa24.52■■□□□ 1.52
GTF3A-202ENST00000419181 DCP1AQ9NPI6 582 aaPredicted RBP24.52■■□□□ 1.52
GTF3A-202ENST00000419181 ZBTB47Q9UFB7 747 aaPredicted RBP24.52■■□□□ 1.52
GTF3A-202ENST00000419181 SERPINB13Q9UIV8 391 aa24.52■■□□□ 1.52
GTF3A-202ENST00000419181 GLRX3O76003 335 aaKnown RBP24.51■■□□□ 1.51
GTF3A-202ENST00000419181 ASNSP08243 561 aa24.51■■□□□ 1.51
GTF3A-202ENST00000419181 JAG1P78504 1218 aa24.51■■□□□ 1.51
GTF3A-202ENST00000419181 SP3Q02447 781 aa24.51■■□□□ 1.51
GTF3A-202ENST00000419181 PKN2Q16513 984 aaKnown RBP24.51■■□□□ 1.51
GTF3A-202ENST00000419181 FASTKD5Q7L8L6 764 aaKnown RBP24.51■■□□□ 1.51
GTF3A-202ENST00000419181 RWDD1Q9H446 243 aaPredicted RBP24.51■■□□□ 1.51
GTF3A-202ENST00000419181 LOC285556D6RIA3 1793 aa24.51■■□□□ 1.51
GTF3A-202ENST00000419181 USP17L5A8MUK1 530 aa24.5■■□□□ 1.51
GTF3A-202ENST00000419181 PLCD1P51178 756 aa24.5■■□□□ 1.51
GTF3A-202ENST00000419181 TATDN1Q6P1N9 297 aa24.5■■□□□ 1.51
GTF3A-202ENST00000419181 SMC5Q8IY18 1101 aa24.5■■□□□ 1.51
GTF3A-202ENST00000419181 ZNF280CQ8ND82 737 aa24.5■■□□□ 1.51
GTF3A-202ENST00000419181 ERO1AQ96HE7 468 aa24.5■■□□□ 1.51
GTF3A-202ENST00000419181 PUS7LQ9H0K6 701 aaKnown RBP24.5■■□□□ 1.51
GTF3A-202ENST00000419181 GINM1Q9NU53 330 aa24.5■■□□□ 1.51
GTF3A-202ENST00000419181 MCM9Q9NXL9 1143 aa24.5■■□□□ 1.51
GTF3A-202ENST00000419181 BAZ2AQ9UIF9 1905 aaKnown RBP24.5■■□□□ 1.51
GTF3A-202ENST00000419181 PRKAB2O43741 272 aa24.49■■□□□ 1.51
GTF3A-202ENST00000419181 GDF11O95390 407 aa24.49■■□□□ 1.51
GTF3A-202ENST00000419181 SPP2Q13103 211 aa24.49■■□□□ 1.51
GTF3A-202ENST00000419181 SHROOM1Q2M3G4 852 aaPredicted RBP24.49■■□□□ 1.51
GTF3A-202ENST00000419181 ATP8A2Q9NTI2 1148 aa24.49■■□□□ 1.51
GTF3A-202ENST00000419181 ZBTB21Q9ULJ3 1066 aa24.49■■□□□ 1.51
GTF3A-202ENST00000419181 ADGRA2Q96PE1 1338 aa24.49■■□□□ 1.51
GTF3A-202ENST00000419181 IGHDP01880 384 aa24.48■■□□□ 1.51
GTF3A-202ENST00000419181 POLR3DP05423 398 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms