RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TLR2O60603 784 aa20.01■□□□□ 0.79
LINC00404-201ENST00000418660 MOGSQ13724 837 aa20.01■□□□□ 0.79
LINC00404-201ENST00000418660 FOXP4Q8IVH2 680 aaPredicted RBP20.01■□□□□ 0.79
LINC00404-201ENST00000418660 CD99L2Q8TCZ2 262 aa20.01■□□□□ 0.79
LINC00404-201ENST00000418660 TRIM17Q9Y577 477 aa20.01■□□□□ 0.79
LINC00404-201ENST00000418660 SLC9C2Q5TAH2 1124 aa20■□□□□ 0.79
LINC00404-201ENST00000418660 OTOP1Q7RTM1 612 aa20■□□□□ 0.79
LINC00404-201ENST00000418660 DOCK1Q14185 1865 aa19.99■□□□□ 0.79
LINC00404-201ENST00000418660 A0A0G2JLL6 359 aaPredicted RBP19.99■□□□□ 0.79
LINC00404-201ENST00000418660 PDHXO00330 501 aa19.99■□□□□ 0.79
LINC00404-201ENST00000418660 SMARCA5O60264 1052 aaPredicted RBP19.99■□□□□ 0.79
LINC00404-201ENST00000418660 PDE6AP16499 860 aa19.99■□□□□ 0.79
LINC00404-201ENST00000418660 CAP2P40123 477 aa19.99■□□□□ 0.79
LINC00404-201ENST00000418660 FASTKD5Q7L8L6 764 aaKnown RBP19.99■□□□□ 0.79
LINC00404-201ENST00000418660 PRRT2Q7Z6L0 340 aaPredicted RBP19.99■□□□□ 0.79
LINC00404-201ENST00000418660 METTL16Q86W50 562 aaKnown RBP19.99■□□□□ 0.79
LINC00404-201ENST00000418660 RIOK1Q9BRS2 568 aaKnown RBP19.99■□□□□ 0.79
LINC00404-201ENST00000418660 BOLA2Q9H3K6 86 aa19.99■□□□□ 0.79
LINC00404-201ENST00000418660 PAG1Q9NWQ8 432 aa19.99■□□□□ 0.79
LINC00404-201ENST00000418660 PALD1Q9ULE6 856 aa19.99■□□□□ 0.79
LINC00404-201ENST00000418660 FOCADQ5VW36 1801 aa19.98■□□□□ 0.79
LINC00404-201ENST00000418660 USP5P45974 858 aa19.98■□□□□ 0.79
LINC00404-201ENST00000418660 RRP1BQ14684 758 aaKnown RBP19.98■□□□□ 0.79
LINC00404-201ENST00000418660 ARHGEF6Q15052 776 aa19.98■□□□□ 0.79
LINC00404-201ENST00000418660 GPAT2Q6NUI2 795 aa19.98■□□□□ 0.79
LINC00404-201ENST00000418660 CRACR2BQ8N4Y2 399 aaPredicted RBP19.98■□□□□ 0.79
LINC00404-201ENST00000418660 EDC3Q96F86 508 aaKnown RBP19.98■□□□□ 0.79
LINC00404-201ENST00000418660 HAUS7Q99871 368 aa19.98■□□□□ 0.79
LINC00404-201ENST00000418660 EFCC1Q9HA90 598 aa19.98■□□□□ 0.79
LINC00404-201ENST00000418660 SAP30BPQ9UHR5 308 aaKnown RBP19.98■□□□□ 0.79
LINC00404-201ENST00000418660 PCDHB15Q9Y5E8 787 aa19.98■□□□□ 0.79
LINC00404-201ENST00000418660 CDK5RAP2Q96SN8 1893 aa19.97■□□□□ 0.79
LINC00404-201ENST00000418660 MAGEB6P1A0A0J9YX57 407 aa19.97■□□□□ 0.79
LINC00404-201ENST00000418660 HLA-DOAP06340 250 aa19.97■□□□□ 0.79
LINC00404-201ENST00000418660 RGS19P49795 217 aa19.97■□□□□ 0.79
LINC00404-201ENST00000418660 TRIM34Q9BYJ4 488 aa19.97■□□□□ 0.79
LINC00404-201ENST00000418660 TBC1D2Q9BYX2 928 aa19.97■□□□□ 0.79
LINC00404-201ENST00000418660 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.97■□□□□ 0.79
LINC00404-201ENST00000418660 ZNF532Q9HCE3 1301 aa19.97■□□□□ 0.79
LINC00404-201ENST00000418660 TCRBV5S4A2TA0A5A2 114 aa19.96■□□□□ 0.79
LINC00404-201ENST00000418660 TRIM75PA6NK02 468 aa19.96■□□□□ 0.79
LINC00404-201ENST00000418660 CAP1Q01518 475 aa19.96■□□□□ 0.79
LINC00404-201ENST00000418660 C17orf99Q6UX52 265 aa19.96■□□□□ 0.79
LINC00404-201ENST00000418660 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
LINC00404-201ENST00000418660 DNAJC18Q9H819 358 aa19.96■□□□□ 0.79
LINC00404-201ENST00000418660 SIPA1L1O43166 1804 aa19.96■□□□□ 0.79
LINC00404-201ENST00000418660 USP17L5A8MUK1 530 aa19.95■□□□□ 0.78
LINC00404-201ENST00000418660 GADL1Q6ZQY3 521 aa19.95■□□□□ 0.78
LINC00404-201ENST00000418660 ZNF280CQ8ND82 737 aa19.95■□□□□ 0.78
LINC00404-201ENST00000418660 CRBNQ96SW2 442 aa19.95■□□□□ 0.78
LINC00404-201ENST00000418660 PARK7Q99497 189 aaKnown RBP19.95■□□□□ 0.78
LINC00404-201ENST00000418660 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.95■□□□□ 0.78
LINC00404-201ENST00000418660 ECHDC1Q9NTX5 307 aa19.95■□□□□ 0.78
LINC00404-201ENST00000418660 PTPN22Q9Y2R2 807 aa19.95■□□□□ 0.78
LINC00404-201ENST00000418660 SLC45A1Q9Y2W3 748 aa19.95■□□□□ 0.78
LINC00404-201ENST00000418660 PHIPQ8WWQ0 1821 aa19.95■□□□□ 0.78
LINC00404-201ENST00000418660 ASNSP08243 561 aa19.94■□□□□ 0.78
LINC00404-201ENST00000418660 LACTBP83111 547 aaPredicted RBP19.94■□□□□ 0.78
LINC00404-201ENST00000418660 SPP2Q13103 211 aa19.94■□□□□ 0.78
LINC00404-201ENST00000418660 KIF22Q14807 665 aa19.94■□□□□ 0.78
LINC00404-201ENST00000418660 TTC6Q86TZ1 520 aa19.94■□□□□ 0.78
LINC00404-201ENST00000418660 CRNKL1Q9BZJ0 848 aaKnown RBP19.94■□□□□ 0.78
LINC00404-201ENST00000418660 AS3MTQ9HBK9 375 aa19.94■□□□□ 0.78
LINC00404-201ENST00000418660 GINM1Q9NU53 330 aa19.94■□□□□ 0.78
LINC00404-201ENST00000418660 CPA4Q9UI42 421 aa19.94■□□□□ 0.78
LINC00404-201ENST00000418660 ADGRA2Q96PE1 1338 aa19.94■□□□□ 0.78
LINC00404-201ENST00000418660 ADD2P35612 726 aa19.93■□□□□ 0.78
LINC00404-201ENST00000418660 SLC4A8Q2Y0W8 1093 aa19.93■□□□□ 0.78
LINC00404-201ENST00000418660 EHD4Q9H223 541 aa19.93■□□□□ 0.78
LINC00404-201ENST00000418660 CYP2C8P10632 490 aa19.92■□□□□ 0.78
LINC00404-201ENST00000418660 PROCA1Q8NCQ7 364 aaPredicted RBP19.92■□□□□ 0.78
LINC00404-201ENST00000418660 GPATCH3Q96I76 525 aa19.92■□□□□ 0.78
LINC00404-201ENST00000418660 WDR18Q9BV38 432 aa19.92■□□□□ 0.78
LINC00404-201ENST00000418660 SERPINB13Q9UIV8 391 aa19.92■□□□□ 0.78
LINC00404-201ENST00000418660 AGTPBP1Q9UPW5 1226 aa19.92■□□□□ 0.78
LINC00404-201ENST00000418660 GNRH1P01148 92 aa19.91■□□□□ 0.78
LINC00404-201ENST00000418660 SOX10P56693 466 aa19.91■□□□□ 0.78
LINC00404-201ENST00000418660 JAG1P78504 1218 aa19.91■□□□□ 0.78
LINC00404-201ENST00000418660 SH3D19Q5HYK7 790 aa19.91■□□□□ 0.78
LINC00404-201ENST00000418660 ZSCAN25Q6NSZ9 544 aa19.91■□□□□ 0.78
LINC00404-201ENST00000418660 TATDN1Q6P1N9 297 aa19.91■□□□□ 0.78
LINC00404-201ENST00000418660 LCORLQ8N3X6 602 aa19.91■□□□□ 0.78
LINC00404-201ENST00000418660 ATAD5Q96QE3 1844 aa19.9■□□□□ 0.78
LINC00404-201ENST00000418660 POLR3DP05423 398 aaPredicted RBP19.9■□□□□ 0.78
LINC00404-201ENST00000418660 UBE3CQ15386 1083 aa19.9■□□□□ 0.78
LINC00404-201ENST00000418660 ARHGAP39Q9C0H5 1083 aa19.9■□□□□ 0.78
LINC00404-201ENST00000418660 ARMT1Q9H993 441 aa19.9■□□□□ 0.78
LINC00404-201ENST00000418660 ZBTB21Q9ULJ3 1066 aa19.9■□□□□ 0.78
LINC00404-201ENST00000418660 PTPRFP10586 1907 aa19.9■□□□□ 0.78
LINC00404-201ENST00000418660 MYH1P12882 1939 aa19.9■□□□□ 0.78
LINC00404-201ENST00000418660 GDF11O95390 407 aa19.89■□□□□ 0.77
LINC00404-201ENST00000418660 BCRP11274 1271 aa19.89■□□□□ 0.77
LINC00404-201ENST00000418660 PLCD1P51178 756 aa19.89■□□□□ 0.77
LINC00404-201ENST00000418660 HMGCS2P54868 508 aa19.89■□□□□ 0.77
LINC00404-201ENST00000418660 MLLT1Q03111 559 aaPredicted RBP19.89■□□□□ 0.77
LINC00404-201ENST00000418660 SLFNL1Q499Z3 407 aa19.89■□□□□ 0.77
LINC00404-201ENST00000418660 TREML2Q5T2D2 321 aa19.89■□□□□ 0.77
LINC00404-201ENST00000418660 SDR42E1Q8WUS8 393 aa19.89■□□□□ 0.77
LINC00404-201ENST00000418660 MCM9Q9NXL9 1143 aa19.89■□□□□ 0.77
LINC00404-201ENST00000418660 MBD4O95243 580 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms