RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MAP7Q14244 749 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 SEZ6Q53EL9 994 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 ZBTB37Q5TC79 503 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 BEND4Q6ZU67 534 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 CDC37L1Q7L3B6 337 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 CLEC10AQ8IUN9 316 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 SMYD4Q8IYR2 804 aaPredicted RBP4.25□□□□□ -1.73
VPS41-206ENST00000418457 EZH1Q92800 747 aaPredicted RBP4.25□□□□□ -1.73
VPS41-206ENST00000418457 WNT10AQ9GZT5 417 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 CAPN10Q9HC96 672 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 INPP5FQ9Y2H2 1132 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 RAXQ9Y2V3 346 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 DAGLAQ9Y4D2 1042 aa4.25□□□□□ -1.73
VPS41-206ENST00000418457 FAM95CA0A1B0GW59 222 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 GRIN3BO60391 1043 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 PGRP06401 933 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 NFICP08651 508 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 GRK4P32298 578 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 GJA8P48165 433 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 TNNI2P48788 182 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 ZC3H6P61129 1189 aaKnown RBP4.24□□□□□ -1.73
VPS41-206ENST00000418457 GNL2Q13823 731 aaKnown RBP4.24□□□□□ -1.73
VPS41-206ENST00000418457 NFKBIBQ15653 356 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 PAOXQ6QHF9 649 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 PRR23CQ6ZRP0 262 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 SLITRK4Q8IW52 837 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.24□□□□□ -1.73
VPS41-206ENST00000418457 KCT2Q8NC54 265 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 ZNF507Q8TCN5 953 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 ISL2Q96A47 359 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 GPRASP2Q96D09 838 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 SPATA32Q96LK8 384 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 FAM83CQ9BQN1 747 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 SEMA6CQ9H3T2 930 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 BRMS1Q9HCU9 246 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 STOML1Q9UBI4 398 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 PCOLCE2Q9UKZ9 415 aa4.24□□□□□ -1.73
VPS41-206ENST00000418457 H2AFB1P0C5Y9 115 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 H2AFB2P0C5Z0 115 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 PLCG1P19174 1290 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 MCM4P33991 863 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 NTF4P34130 210 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 ZNF165P49910 485 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 GK5Q6ZS86 529 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 RASGRP4Q8TDF6 673 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 ADAM30Q9UKF2 790 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 POLR3KQ9Y2Y1 108 aaPredicted RBP4.23□□□□□ -1.73
VPS41-206ENST00000418457 CORINQ9Y5Q5 1042 aa4.23□□□□□ -1.73
VPS41-206ENST00000418457 HMX2A2RU54 273 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 HTR3BO95264 441 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 COL9A2Q14055 689 aaPredicted RBP4.22□□□□□ -1.73
VPS41-206ENST00000418457 MLECQ14165 292 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 RSPO4Q2I0M5 234 aaPredicted RBP4.22□□□□□ -1.73
VPS41-206ENST00000418457 NKAPLQ5M9Q1 402 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 VPS37DQ86XT2 251 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 HID1Q8IV36 788 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 REXO1Q8N1G1 1221 aaKnown RBP4.22□□□□□ -1.73
VPS41-206ENST00000418457 TINF2Q9BSI4 451 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 C7orf69Q9H7B7 122 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 LGR6Q9HBX8 967 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 GINM1Q9NU53 330 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 REV1Q9UBZ9 1251 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 EFR3BQ9Y2G0 817 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 PCDHB14Q9Y5E9 798 aa4.22□□□□□ -1.73
VPS41-206ENST00000418457 PRR36Q9H6K5 1346 aa4.21□□□□□ -1.73
VPS41-206ENST00000418457 GSC2O15499 205 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 DYNC1LI2O43237 492 aaPredicted RBP4.21□□□□□ -1.74
VPS41-206ENST00000418457 DYRK3O43781 588 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 ATE1O95260 518 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 CAP2P40123 477 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 RANGAP1P46060 587 aaPredicted RBP4.21□□□□□ -1.74
VPS41-206ENST00000418457 CLCQ05315 142 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 NAALADL2Q58DX5 795 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 TMEM201Q5SNT2 666 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 SLC6A19Q695T7 634 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 SEZ6L2Q6UXD5 910 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 UBE3DQ7Z6J8 389 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 GIMAP7Q8NHV1 300 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 ACSF2Q96CM8 615 aaPredicted RBP4.21□□□□□ -1.74
VPS41-206ENST00000418457 SEC16BQ96JE7 1060 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 TMEM87BQ96K49 555 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 TBC1D32Q96NH3 1257 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 C8orf37Q96NL8 207 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 FERD3LQ96RJ6 166 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 FBRSQ9HAH7 460 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 TJP2Q9UDY2 1190 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 PRKAG2Q9UGJ0 569 aa4.21□□□□□ -1.74
VPS41-206ENST00000418457 LRIG2O94898 1065 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 FURINP09958 794 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 IMPDH2P12268 514 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 ATF4P18848 351 aaPredicted RBP4.2□□□□□ -1.74
VPS41-206ENST00000418457 FSTP19883 344 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 SOX9P48436 509 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 NASPP49321 788 aaPredicted RBP4.2□□□□□ -1.74
VPS41-206ENST00000418457 ARID5AQ03989 594 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 NFIAQ12857 509 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 SLBPQ14493 270 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS41-206ENST00000418457 NKG7Q16617 165 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 RNF43Q68DV7 783 aa4.2□□□□□ -1.74
VPS41-206ENST00000418457 ARMCX6Q7L4S7 300 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms