RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 IFIT3O14879 490 aaKnown RBP24.43■■□□□ 1.5
CASC3-203ENST00000418132 PRDM1O75626 825 aa24.43■■□□□ 1.5
CASC3-203ENST00000418132 RBM5P52756 815 aaKnown RBP eCLIP24.43■■□□□ 1.5
CASC3-203ENST00000418132 RASSF7Q02833 373 aa24.43■■□□□ 1.5
CASC3-203ENST00000418132 SCRN1Q12765 414 aa24.43■■□□□ 1.5
CASC3-203ENST00000418132 SART3Q15020 963 aaKnown RBP24.43■■□□□ 1.5
CASC3-203ENST00000418132 TMEM67Q5HYA8 995 aa24.43■■□□□ 1.5
CASC3-203ENST00000418132 AGBL3Q8NEM8 1001 aa24.43■■□□□ 1.5
CASC3-203ENST00000418132 DDX4Q9NQI0 724 aaKnown RBP24.43■■□□□ 1.5
CASC3-203ENST00000418132 KLF18A0A0U1RQI7 1052 aa24.42■■□□□ 1.5
CASC3-203ENST00000418132 SLC4A8Q2Y0W8 1093 aa24.42■■□□□ 1.5
CASC3-203ENST00000418132 CFAP100Q494V2 611 aa24.42■■□□□ 1.5
CASC3-203ENST00000418132 CIAPIN1Q6FI81 312 aa24.42■■□□□ 1.5
CASC3-203ENST00000418132 RANBP6O60518 1105 aaKnown RBP24.41■■□□□ 1.5
CASC3-203ENST00000418132 PRELPP51888 382 aa24.41■■□□□ 1.5
CASC3-203ENST00000418132 PICALMQ13492 652 aa24.41■■□□□ 1.5
CASC3-203ENST00000418132 DYNLL2Q96FJ2 89 aa24.41■■□□□ 1.5
CASC3-203ENST00000418132 ZBTB12Q9Y330 459 aaPredicted RBP24.41■■□□□ 1.5
CASC3-203ENST00000418132 CHMP4CQ96CF2 233 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 ZKSCAN3Q9BRR0 538 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 UBAC1Q9BSL1 405 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 IDI2Q9BXS1 227 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 SENP2Q9HC62 589 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 HDAC9Q9UKV0 1011 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 HPS5Q9UPZ3 1129 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 NPM3O75607 178 aaKnown RBP24.4■■□□□ 1.5
CASC3-203ENST00000418132 GJB2P29033 226 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 PKP1Q13835 747 aa24.4■■□□□ 1.5
CASC3-203ENST00000418132 LLPHQ9BRT6 129 aaKnown RBP24.4■■□□□ 1.5
CASC3-203ENST00000418132 OSBPL5Q9H0X9 879 aaPredicted RBP24.4■■□□□ 1.5
CASC3-203ENST00000418132 NAP1L2Q9ULW6 460 aaPredicted RBP24.4■■□□□ 1.5
CASC3-203ENST00000418132 ERICH2A1L162 156 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 NFIAQ12857 509 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 TNIP1Q15025 636 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 SEC23AQ15436 765 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 APOA5Q6Q788 366 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 C16orf86Q6ZW13 317 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 TMTC2Q8N394 836 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 OGFOD1Q8N543 542 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 SYT17Q9BSW7 474 aa24.39■■□□□ 1.49
CASC3-203ENST00000418132 GOLGA8BA8MQT2 603 aa24.38■■□□□ 1.49
CASC3-203ENST00000418132 CCT2P78371 535 aaKnown RBP24.38■■□□□ 1.49
CASC3-203ENST00000418132 WTAPQ15007 396 aa24.38■■□□□ 1.49
CASC3-203ENST00000418132 TTC6Q86TZ1 520 aa24.38■■□□□ 1.49
CASC3-203ENST00000418132 IQCA1Q86XH1 822 aa24.38■■□□□ 1.49
CASC3-203ENST00000418132 ZSCAN10Q96SZ4 725 aaPredicted RBP24.38■■□□□ 1.49
CASC3-203ENST00000418132 ZNF287Q9HBT7 754 aa24.38■■□□□ 1.49
CASC3-203ENST00000418132 TNKSO95271 1327 aa24.38■■□□□ 1.49
CASC3-203ENST00000418132 FZD9O00144 591 aa24.38■■□□□ 1.49
CASC3-203ENST00000418132 PRMT6Q96LA8 375 aaPredicted RBP24.38■■□□□ 1.49
CASC3-203ENST00000418132 NFXL1Q6ZNB6 911 aa24.37■■□□□ 1.49
CASC3-203ENST00000418132 SMARCC2Q8TAQ2 1214 aa24.37■■□□□ 1.49
CASC3-203ENST00000418132 MKNK2Q9HBH9 465 aa24.37■■□□□ 1.49
CASC3-203ENST00000418132 NCOA5Q9HCD5 579 aaKnown RBP24.37■■□□□ 1.49
CASC3-203ENST00000418132 ZDHHC9Q9Y397 364 aa24.37■■□□□ 1.49
CASC3-203ENST00000418132 SPDYE2BA6NHP3 402 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 SPDYE6P0CI01 402 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 TNPO1Q92973 898 aaKnown RBP24.36■■□□□ 1.49
CASC3-203ENST00000418132 TDRD3Q9H7E2 651 aaKnown RBP24.36■■□□□ 1.49
CASC3-203ENST00000418132 CCDC69A6NI79 296 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 CTDNEP1O95476 244 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 BRD1O95696 1058 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 CDK8P49336 464 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 FAM47AQ5JRC9 791 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 ENAHQ8N8S7 591 aaPredicted RBP24.36■■□□□ 1.49
CASC3-203ENST00000418132 MTMR14Q8NCE2 650 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 SLC44A5Q8NCS7 719 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 NSUN7Q8NE18 718 aaKnown RBP24.36■■□□□ 1.49
CASC3-203ENST00000418132 FAM198AQ9UFP1 575 aa24.36■■□□□ 1.49
CASC3-203ENST00000418132 TSPY2A6NKD2 308 aa24.35■■□□□ 1.49
CASC3-203ENST00000418132 DTNBO60941 627 aa24.35■■□□□ 1.49
CASC3-203ENST00000418132 MMP14P50281 582 aa24.35■■□□□ 1.49
CASC3-203ENST00000418132 GABPAQ06546 454 aa24.35■■□□□ 1.49
CASC3-203ENST00000418132 SLC12A7Q9Y666 1083 aa24.35■■□□□ 1.49
CASC3-203ENST00000418132 NID2Q14112 1375 aa24.35■■□□□ 1.49
CASC3-203ENST00000418132 ZBTB43O43298 467 aa24.34■■□□□ 1.49
CASC3-203ENST00000418132 DHX16O60231 1041 aaKnown RBP24.34■■□□□ 1.49
CASC3-203ENST00000418132 RASA1P20936 1047 aa24.34■■□□□ 1.49
CASC3-203ENST00000418132 RPS12P25398 132 aaKnown RBP24.34■■□□□ 1.49
CASC3-203ENST00000418132 CACNB3P54284 484 aa24.34■■□□□ 1.49
CASC3-203ENST00000418132 DLGAP5Q15398 846 aa24.34■■□□□ 1.49
CASC3-203ENST00000418132 JAK2O60674 1132 aa24.34■■□□□ 1.49
CASC3-203ENST00000418132 SYT1P21579 422 aa24.34■■□□□ 1.49
CASC3-203ENST00000418132 TFAP4Q01664 338 aa24.34■■□□□ 1.49
CASC3-203ENST00000418132 ARHGAP27Q6ZUM4 889 aa24.34■■□□□ 1.49
CASC3-203ENST00000418132 ZNF444Q8N0Y2 327 aaPredicted RBP24.34■■□□□ 1.49
CASC3-203ENST00000418132 DHX36Q9H2U1 1008 aaKnown RBP24.34■■□□□ 1.49
CASC3-203ENST00000418132 METAP2P50579 478 aaKnown RBP eCLIP24.33■■□□□ 1.49
CASC3-203ENST00000418132 RCAN1P53805 252 aa24.33■■□□□ 1.49
CASC3-203ENST00000418132 EIF6P56537 245 aaKnown RBP24.33■■□□□ 1.49
CASC3-203ENST00000418132 ZFPM1Q8IX07 1006 aa24.33■■□□□ 1.49
CASC3-203ENST00000418132 DICER1Q9UPY3 1922 aaKnown RBP24.33■■□□□ 1.49
CASC3-203ENST00000418132 ENTPD3O75355 529 aa24.33■■□□□ 1.48
CASC3-203ENST00000418132 PDIA4P13667 645 aaKnown RBP24.33■■□□□ 1.48
CASC3-203ENST00000418132 HMGN5P82970 282 aaKnown RBP24.33■■□□□ 1.48
CASC3-203ENST00000418132 SYNE3Q6ZMZ3 975 aa24.33■■□□□ 1.48
CASC3-203ENST00000418132 RAB11FIP4Q86YS3 637 aa24.33■■□□□ 1.48
CASC3-203ENST00000418132 EHD4Q9H223 541 aa24.33■■□□□ 1.48
CASC3-203ENST00000418132 SERPINB13Q9UIV8 391 aa24.33■■□□□ 1.48
CASC3-203ENST00000418132 WDR33Q9C0J8 1336 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms