RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
SYNC-203ENST00000417633 STAG1Q8WVM7 1258 aa13.74□□□□□ -0.21
SYNC-203ENST00000417633 CSRNP1Q96S65 589 aa13.74□□□□□ -0.21
SYNC-203ENST00000417633 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
SYNC-203ENST00000417633 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
SYNC-203ENST00000417633 SCAF8Q9UPN6 1271 aaKnown RBP13.74□□□□□ -0.21
SYNC-203ENST00000417633 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
SYNC-203ENST00000417633 LAMB1P07942 1786 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 SMIM22K7EJ46 135 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 YY1P25490 414 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 HAND2P61296 217 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 EVX2Q03828 476 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 CTDSPL2Q05D32 466 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 AKNAD1Q5T1N1 836 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 HOOK2Q96ED9 719 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 TBC1D32Q96NH3 1257 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 RNF41Q9H4P4 317 aaPredicted RBP13.73□□□□□ -0.21
SYNC-203ENST00000417633 SWAP70Q9UH65 585 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 HERC5Q9UII4 1024 aaKnown RBP13.73□□□□□ -0.21
SYNC-203ENST00000417633 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
SYNC-203ENST00000417633 SNX14Q9Y5W7 946 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 TACC3Q9Y6A5 838 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 SIPA1L1O43166 1804 aa13.73□□□□□ -0.21
SYNC-203ENST00000417633 E7EWF7 191 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 KIF3CO14782 793 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 ORC4O43929 436 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 CDK8P49336 464 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 NT5C2P49902 561 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 PDE4BQ07343 736 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 KRT32Q14532 448 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 SLC4A8Q2Y0W8 1093 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 NBPF12Q5TAG4 269 aaPredicted RBP13.72□□□□□ -0.21
SYNC-203ENST00000417633 MFSD6Q6ZSS7 791 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 TBC1D10CQ8IV04 446 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 CDAN1Q8IWY9 1227 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 DYNLL2Q96FJ2 89 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 GLIS2Q9BZE0 524 aaPredicted RBP13.72□□□□□ -0.21
SYNC-203ENST00000417633 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 TAF6LQ9Y6J9 622 aa13.72□□□□□ -0.21
SYNC-203ENST00000417633 ADM5C9JUS6 153 aa13.71□□□□□ -0.21
SYNC-203ENST00000417633 MAP1SQ66K74 1059 aaPredicted RBP13.71□□□□□ -0.21
SYNC-203ENST00000417633 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
SYNC-203ENST00000417633 STOX1Q6ZVD7 989 aa13.71□□□□□ -0.21
SYNC-203ENST00000417633 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
SYNC-203ENST00000417633 PSMA5P28066 241 aa13.7□□□□□ -0.22
SYNC-203ENST00000417633 PRAMEF18Q5VWM3 479 aa13.7□□□□□ -0.22
SYNC-203ENST00000417633 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
SYNC-203ENST00000417633 TATDN1Q6P1N9 297 aa13.7□□□□□ -0.22
SYNC-203ENST00000417633 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
SYNC-203ENST00000417633 ZNF784Q8NCA9 323 aaPredicted RBP13.7□□□□□ -0.22
SYNC-203ENST00000417633 TM6SF1Q9BZW5 370 aa13.7□□□□□ -0.22
SYNC-203ENST00000417633 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
SYNC-203ENST00000417633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
SYNC-203ENST00000417633 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
SYNC-203ENST00000417633 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
SYNC-203ENST00000417633 RASA1P20936 1047 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 SHMT1P34896 483 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 TRDNQ13061 729 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 ADCK5Q3MIX3 580 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 SLC44A5Q8NCS7 719 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 NCOA7Q8NI08 942 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 NEK1Q96PY6 1258 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 KIF2CQ99661 725 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 TRIM34Q9BYJ4 488 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 KRT23Q9C075 422 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 MKNK2Q9HBH9 465 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 ZNF112Q9UJU3 913 aa13.69□□□□□ -0.22
SYNC-203ENST00000417633 NEDD4P46934 1319 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 HMGB1P09429 215 aaKnown RBP13.68□□□□□ -0.22
SYNC-203ENST00000417633 SLURP2P0DP57 97 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 DLK2Q6UY11 383 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 MIGA2Q7L4E1 593 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 ZNF444Q8N0Y2 327 aaPredicted RBP13.68□□□□□ -0.22
SYNC-203ENST00000417633 STK11IPQ8N1F8 1099 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 ESR2Q92731 530 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 ZNF341Q9BYN7 854 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 ZSWIM6Q9HCJ5 1215 aa13.68□□□□□ -0.22
SYNC-203ENST00000417633 SSC5DA1L4H1 1573 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 MYH8P13535 1937 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 PHF20L1A8MW92 1017 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 USP2O75604 605 aaPredicted RBP13.67□□□□□ -0.22
SYNC-203ENST00000417633 PRDM1O75626 825 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 TOMM70O94826 608 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 NF2P35240 595 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 CERKLQ49MI3 558 aaPredicted RBP13.67□□□□□ -0.22
SYNC-203ENST00000417633 RALYLQ86SE5 291 aaKnown RBP13.67□□□□□ -0.22
SYNC-203ENST00000417633 MB21D2Q8IYB1 491 aaPredicted RBP13.67□□□□□ -0.22
SYNC-203ENST00000417633 RBM46Q8TBY0 533 aaKnown RBP13.67□□□□□ -0.22
SYNC-203ENST00000417633 KLRG1Q96E93 195 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 JAKMIP1Q96N16 626 aaKnown RBP13.67□□□□□ -0.22
SYNC-203ENST00000417633 MTA3Q9BTC8 594 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 GINM1Q9NU53 330 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 TCP11L1Q9NUJ3 509 aa13.67□□□□□ -0.22
SYNC-203ENST00000417633 ZSWIM5Q9P217 1185 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms