RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
TRIM48-201ENST00000417545 C19orf67A6NJJ6 358 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 GABBR2O75899 941 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 ZKSCAN1P17029 563 aaPredicted RBP10.06□□□□□ -0.8
TRIM48-201ENST00000417545 HAND2P61296 217 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 PTH1RQ03431 593 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 PPARAQ07869 468 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 C8orf34Q49A92 452 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
TRIM48-201ENST00000417545 MKNK2Q9HBH9 465 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 EPB41L4AQ9HCS5 686 aaPredicted RBP10.06□□□□□ -0.8
TRIM48-201ENST00000417545 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.06□□□□□ -0.8
TRIM48-201ENST00000417545 PI4KBQ9UBF8 816 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 ZMYM6O95789 1325 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 CNTNAP1P78357 1384 aa10.06□□□□□ -0.8
TRIM48-201ENST00000417545 PPP1R12BO60237 982 aaPredicted RBP10.05□□□□□ -0.8
TRIM48-201ENST00000417545 TOMM70O94826 608 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 FGAP02671 866 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 TRDNQ13061 729 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 PRKG1Q13976 671 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 ALX1Q15699 326 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 RRP12Q5JTH9 1297 aaKnown RBP10.05□□□□□ -0.8
TRIM48-201ENST00000417545 CTR9Q6PD62 1173 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 RALYLQ86SE5 291 aaKnown RBP10.05□□□□□ -0.8
TRIM48-201ENST00000417545 CDCA5Q96FF9 252 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 LSG1Q9H089 658 aaKnown RBP10.05□□□□□ -0.8
TRIM48-201ENST00000417545 IL25Q9H293 177 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRIM48-201ENST00000417545 HERC5Q9UII4 1024 aaKnown RBP10.05□□□□□ -0.8
TRIM48-201ENST00000417545 SERPINB13Q9UIV8 391 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 TRPM7Q96QT4 1865 aa10.05□□□□□ -0.8
TRIM48-201ENST00000417545 CYP2D7A0A087X1C5 515 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 DDTLA6NHG4 134 aaPredicted RBP10.04□□□□□ -0.8
TRIM48-201ENST00000417545 KIF3CO14782 793 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 CYP2D6P10635 497 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 SBK1Q52WX2 424 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 ATRNL1Q5VV63 1379 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 PRAMEF18Q5VWM3 479 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 MFSD6Q6ZSS7 791 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 ARMC9Q7Z3E5 817 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 FOXP4Q8IVH2 680 aaPredicted RBP10.04□□□□□ -0.8
TRIM48-201ENST00000417545 ZFPM1Q8IX07 1006 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 RBM46Q8TBY0 533 aaKnown RBP10.04□□□□□ -0.8
TRIM48-201ENST00000417545 MAP4K1Q92918 833 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 ZNF341Q9BYN7 854 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 SWAP70Q9UH65 585 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 PGAP2Q9UHJ9 254 aa10.04□□□□□ -0.8
TRIM48-201ENST00000417545 MPHOSPH10O00566 681 aaKnown RBP10.03□□□□□ -0.8
TRIM48-201ENST00000417545 EPB41L2O43491 1005 aaKnown RBP10.03□□□□□ -0.8
TRIM48-201ENST00000417545 IREB2P48200 963 aaKnown RBP10.03□□□□□ -0.8
TRIM48-201ENST00000417545 NBPF12Q5TAG4 269 aaPredicted RBP10.03□□□□□ -0.8
TRIM48-201ENST00000417545 C12orf60Q5U649 245 aa10.03□□□□□ -0.8
TRIM48-201ENST00000417545 CREB3L3Q68CJ9 461 aa10.03□□□□□ -0.8
TRIM48-201ENST00000417545 MIGA2Q7L4E1 593 aa10.03□□□□□ -0.8
TRIM48-201ENST00000417545 ZNF444Q8N0Y2 327 aaPredicted RBP10.03□□□□□ -0.8
TRIM48-201ENST00000417545 C2orf69Q8N8R5 385 aa10.03□□□□□ -0.8
TRIM48-201ENST00000417545 EHD4Q9H223 541 aa10.03□□□□□ -0.8
TRIM48-201ENST00000417545 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
TRIM48-201ENST00000417545 FAM196BA6NMK8 535 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 TRAF5O00463 557 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 SLC27A2O14975 620 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 CELF2O95319 508 aaKnown RBP10.02□□□□□ -0.81
TRIM48-201ENST00000417545 PCP11498 1178 aaKnown RBP10.02□□□□□ -0.81
TRIM48-201ENST00000417545 PLCD1P51178 756 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 KRT32Q14532 448 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 AKNAD1Q5T1N1 836 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 DYNLL2Q96FJ2 89 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 KRT23Q9C075 422 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 CNNM2Q9H8M5 875 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 MKRN1Q9UHC7 482 aaKnown RBP10.02□□□□□ -0.81
TRIM48-201ENST00000417545 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 ANGEL1Q9UNK9 670 aaKnown RBP10.02□□□□□ -0.81
TRIM48-201ENST00000417545 CSADQ9Y600 493 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 ATAD5Q96QE3 1844 aa10.02□□□□□ -0.81
TRIM48-201ENST00000417545 ROBO3Q96MS0 1386 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 SIPA1L1O43166 1804 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 PAPPA2Q9BXP8 1791 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 TSPY2A6NKD2 308 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 FOXP2O15409 715 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 RANBP6O60518 1105 aaKnown RBP10.01□□□□□ -0.81
TRIM48-201ENST00000417545 PRDM1O75626 825 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 TSPY3P0CV98 308 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 TSPY8P0CW00 308 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 CDK8P49336 464 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 FGD1P98174 961 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 FSTL1Q12841 308 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 CERKLQ49MI3 558 aaPredicted RBP10.01□□□□□ -0.81
TRIM48-201ENST00000417545 C16orf86Q6ZW13 317 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 SH3BP5LQ7L8J4 393 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 NCOA7Q8NI08 942 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 ESR2Q92731 530 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 WRNIP1Q96S55 665 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 BACH2Q9BYV9 841 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 C22orf23Q9BZE7 217 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 GBA2Q9HCG7 927 aaPredicted RBP10.01□□□□□ -0.81
TRIM48-201ENST00000417545 DOCK1Q14185 1865 aa10.01□□□□□ -0.81
TRIM48-201ENST00000417545 ERICH2A1L162 156 aa10□□□□□ -0.81
TRIM48-201ENST00000417545 CYP21A2P08686 494 aa10□□□□□ -0.81
TRIM48-201ENST00000417545 PSMA5P28066 241 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms