RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 PHIPQ8WWQ0 1821 aa18.99■□□□□ 0.63
ITGB1-204ENST00000417122 ATAD5Q96QE3 1844 aa18.98■□□□□ 0.63
ITGB1-204ENST00000417122 ATP5JP18859 108 aa18.98■□□□□ 0.63
ITGB1-204ENST00000417122 ANKRD23Q86SG2 305 aa18.98■□□□□ 0.63
ITGB1-204ENST00000417122 CD99L2Q8TCZ2 262 aa18.98■□□□□ 0.63
ITGB1-204ENST00000417122 BOLA2Q9H3K6 86 aa18.98■□□□□ 0.63
ITGB1-204ENST00000417122 AFG3L2Q9Y4W6 797 aa18.98■□□□□ 0.63
ITGB1-204ENST00000417122 MYH1P12882 1939 aa18.98■□□□□ 0.63
ITGB1-204ENST00000417122 MOGSQ13724 837 aa18.97■□□□□ 0.63
ITGB1-204ENST00000417122 SLC9C2Q5TAH2 1124 aa18.97■□□□□ 0.63
ITGB1-204ENST00000417122 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.97■□□□□ 0.63
ITGB1-204ENST00000417122 PALD1Q9ULE6 856 aa18.97■□□□□ 0.63
ITGB1-204ENST00000417122 TRIM17Q9Y577 477 aa18.97■□□□□ 0.63
ITGB1-204ENST00000417122 TLR2O60603 784 aa18.96■□□□□ 0.63
ITGB1-204ENST00000417122 PDE6AP16499 860 aa18.96■□□□□ 0.63
ITGB1-204ENST00000417122 USP5P45974 858 aa18.96■□□□□ 0.63
ITGB1-204ENST00000417122 FBXO46Q6PJ61 603 aaPredicted RBP18.96■□□□□ 0.63
ITGB1-204ENST00000417122 OTOP1Q7RTM1 612 aa18.96■□□□□ 0.63
ITGB1-204ENST00000417122 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
ITGB1-204ENST00000417122 EDC3Q96F86 508 aaKnown RBP18.96■□□□□ 0.63
ITGB1-204ENST00000417122 PAG1Q9NWQ8 432 aa18.96■□□□□ 0.63
ITGB1-204ENST00000417122 SAP30BPQ9UHR5 308 aaKnown RBP18.96■□□□□ 0.63
ITGB1-204ENST00000417122 HPS5Q9UPZ3 1129 aa18.96■□□□□ 0.63
ITGB1-204ENST00000417122 PCDHB15Q9Y5E8 787 aa18.96■□□□□ 0.63
ITGB1-204ENST00000417122 PTPRFP10586 1907 aa18.96■□□□□ 0.63
ITGB1-204ENST00000417122 A0A0G2JLL6 359 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-204ENST00000417122 PDHXO00330 501 aa18.95■□□□□ 0.62
ITGB1-204ENST00000417122 HLA-DOAP06340 250 aa18.95■□□□□ 0.62
ITGB1-204ENST00000417122 CAP2P40123 477 aa18.95■□□□□ 0.62
ITGB1-204ENST00000417122 RRP1BQ14684 758 aaKnown RBP18.95■□□□□ 0.62
ITGB1-204ENST00000417122 FASTKD5Q7L8L6 764 aaKnown RBP18.95■□□□□ 0.62
ITGB1-204ENST00000417122 PRRT2Q7Z6L0 340 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-204ENST00000417122 CCDC84Q86UT8 332 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-204ENST00000417122 METTL16Q86W50 562 aaKnown RBP18.95■□□□□ 0.62
ITGB1-204ENST00000417122 CRACR2BQ8N4Y2 399 aaPredicted RBP18.95■□□□□ 0.62
ITGB1-204ENST00000417122 HAUS7Q99871 368 aa18.95■□□□□ 0.62
ITGB1-204ENST00000417122 RIOK1Q9BRS2 568 aaKnown RBP18.95■□□□□ 0.62
ITGB1-204ENST00000417122 TRIM34Q9BYJ4 488 aa18.95■□□□□ 0.62
ITGB1-204ENST00000417122 ZNF532Q9HCE3 1301 aa18.95■□□□□ 0.62
ITGB1-204ENST00000417122 MAGEB6P1A0A0J9YX57 407 aa18.94■□□□□ 0.62
ITGB1-204ENST00000417122 TRIM75PA6NK02 468 aa18.94■□□□□ 0.62
ITGB1-204ENST00000417122 GPAT2Q6NUI2 795 aa18.94■□□□□ 0.62
ITGB1-204ENST00000417122 CRBNQ96SW2 442 aa18.94■□□□□ 0.62
ITGB1-204ENST00000417122 DNAJC18Q9H819 358 aa18.94■□□□□ 0.62
ITGB1-204ENST00000417122 EFCC1Q9HA90 598 aa18.94■□□□□ 0.62
ITGB1-204ENST00000417122 TCRBV5S4A2TA0A5A2 114 aa18.93■□□□□ 0.62
ITGB1-204ENST00000417122 SLC4A8Q2Y0W8 1093 aa18.93■□□□□ 0.62
ITGB1-204ENST00000417122 GADL1Q6ZQY3 521 aa18.93■□□□□ 0.62
ITGB1-204ENST00000417122 TBC1D2Q9BYX2 928 aa18.93■□□□□ 0.62
ITGB1-204ENST00000417122 MYH7P12883 1935 aa18.92■□□□□ 0.62
ITGB1-204ENST00000417122 CAP1Q01518 475 aa18.92■□□□□ 0.62
ITGB1-204ENST00000417122 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.92■□□□□ 0.62
ITGB1-204ENST00000417122 ECHDC1Q9NTX5 307 aa18.92■□□□□ 0.62
ITGB1-204ENST00000417122 NAV1Q8NEY1 1877 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 USP17L5A8MUK1 530 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 ADD2P35612 726 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 ARHGEF6Q15052 776 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 C17orf99Q6UX52 265 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 ZNF280CQ8ND82 737 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 GPATCH3Q96I76 525 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 PARK7Q99497 189 aaKnown RBP18.91■□□□□ 0.62
ITGB1-204ENST00000417122 CRNKL1Q9BZJ0 848 aaKnown RBP18.91■□□□□ 0.62
ITGB1-204ENST00000417122 CPA4Q9UI42 421 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 PTPN22Q9Y2R2 807 aa18.91■□□□□ 0.62
ITGB1-204ENST00000417122 ASNSP08243 561 aa18.9■□□□□ 0.62
ITGB1-204ENST00000417122 SPP2Q13103 211 aa18.9■□□□□ 0.62
ITGB1-204ENST00000417122 KIF22Q14807 665 aa18.9■□□□□ 0.62
ITGB1-204ENST00000417122 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
ITGB1-204ENST00000417122 AS3MTQ9HBK9 375 aa18.9■□□□□ 0.62
ITGB1-204ENST00000417122 SLC45A1Q9Y2W3 748 aa18.9■□□□□ 0.62
ITGB1-204ENST00000417122 DDX60LQ5H9U9 1706 aaKnown RBP18.9■□□□□ 0.62
ITGB1-204ENST00000417122 ADGRA2Q96PE1 1338 aa18.9■□□□□ 0.62
ITGB1-204ENST00000417122 ZSWIM8A7E2V4 1837 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 GDF11O95390 407 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 CYP2C8P10632 490 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 RGS19P49795 217 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 LACTBP83111 547 aaPredicted RBP18.89■□□□□ 0.61
ITGB1-204ENST00000417122 SLFNL1Q499Z3 407 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 LCORLQ8N3X6 602 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 EHD4Q9H223 541 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 GINM1Q9NU53 330 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 SERPINB13Q9UIV8 391 aa18.89■□□□□ 0.61
ITGB1-204ENST00000417122 LOC285556D6RIA3 1793 aa18.88■□□□□ 0.61
ITGB1-204ENST00000417122 POLR3DP05423 398 aaPredicted RBP18.88■□□□□ 0.61
ITGB1-204ENST00000417122 SOX10P56693 466 aa18.88■□□□□ 0.61
ITGB1-204ENST00000417122 JAG1P78504 1218 aa18.88■□□□□ 0.61
ITGB1-204ENST00000417122 PROCA1Q8NCQ7 364 aaPredicted RBP18.88■□□□□ 0.61
ITGB1-204ENST00000417122 SDR42E1Q8WUS8 393 aa18.88■□□□□ 0.61
ITGB1-204ENST00000417122 ARHGAP39Q9C0H5 1083 aa18.88■□□□□ 0.61
ITGB1-204ENST00000417122 ARMT1Q9H993 441 aa18.88■□□□□ 0.61
ITGB1-204ENST00000417122 AGTPBP1Q9UPW5 1226 aa18.88■□□□□ 0.61
ITGB1-204ENST00000417122 CHGBP05060 677 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 PLCD1P51178 756 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 HMGCS2P54868 508 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 UBE3CQ15386 1083 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 SHROOM1Q2M3G4 852 aaPredicted RBP18.87■□□□□ 0.61
ITGB1-204ENST00000417122 TREML2Q5T2D2 321 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 TSHZ3Q63HK5 1081 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 ZSCAN25Q6NSZ9 544 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 TATDN1Q6P1N9 297 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms