RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 SLC45A1Q9Y2W3 748 aa26.72■■□□□ 1.87
ACTB-203ENST00000417101 MYPNQ86TC9 1320 aa26.71■■□□□ 1.87
ACTB-203ENST00000417101 BAG3O95817 575 aa26.71■■□□□ 1.87
ACTB-203ENST00000417101 ZAP70P43403 619 aa26.71■■□□□ 1.87
ACTB-203ENST00000417101 ZNF512BQ96KM6 892 aaPredicted RBP26.71■■□□□ 1.87
ACTB-203ENST00000417101 FCGRTP55899 365 aa26.7■■□□□ 1.86
ACTB-203ENST00000417101 CCDC8Q9H0W5 538 aaPredicted RBP26.7■■□□□ 1.86
ACTB-203ENST00000417101 TLR7Q9NYK1 1049 aaKnown RBP26.7■■□□□ 1.86
ACTB-203ENST00000417101 ZBED9Q6R2W3 1325 aa26.69■■□□□ 1.86
ACTB-203ENST00000417101 PLCG2P16885 1265 aa26.69■■□□□ 1.86
ACTB-203ENST00000417101 PPP4CP60510 307 aa26.69■■□□□ 1.86
ACTB-203ENST00000417101 ADGRA1Q86SQ6 560 aa26.69■■□□□ 1.86
ACTB-203ENST00000417101 SMCR8Q8TEV9 937 aaPredicted RBP26.69■■□□□ 1.86
ACTB-203ENST00000417101 PIH1D3Q9NQM4 214 aaKnown RBP26.69■■□□□ 1.86
ACTB-203ENST00000417101 AGTPBP1Q9UPW5 1226 aa26.69■■□□□ 1.86
ACTB-203ENST00000417101 PHIPQ8WWQ0 1821 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 GRK4P32298 578 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 CAP2P40123 477 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 PRKCZQ05513 592 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 SPP2Q13103 211 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 RRP1BQ14684 758 aaKnown RBP26.68■■□□□ 1.86
ACTB-203ENST00000417101 MTFR1Q15390 333 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 CEP85Q6P2H3 762 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 PANK1Q8TE04 598 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 TGFBRAP1Q8WUH2 860 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 EAF2Q96CJ1 260 aaPredicted RBP26.68■■□□□ 1.86
ACTB-203ENST00000417101 PI4KBQ9UBF8 816 aa26.68■■□□□ 1.86
ACTB-203ENST00000417101 HERC5Q9UII4 1024 aaKnown RBP26.68■■□□□ 1.86
ACTB-203ENST00000417101 PTPRFP10586 1907 aa26.67■■□□□ 1.86
ACTB-203ENST00000417101 TREML2Q5T2D2 321 aa26.67■■□□□ 1.86
ACTB-203ENST00000417101 MAPKAPK5Q8IW41 473 aa26.67■■□□□ 1.86
ACTB-203ENST00000417101 ZNF280CQ8ND82 737 aa26.67■■□□□ 1.86
ACTB-203ENST00000417101 DHX36Q9H2U1 1008 aaKnown RBP26.67■■□□□ 1.86
ACTB-203ENST00000417101 PROCA1Q8NCQ7 364 aaPredicted RBP26.65■■□□□ 1.86
ACTB-203ENST00000417101 BIN2Q9UBW5 565 aaPredicted RBP26.65■■□□□ 1.86
ACTB-203ENST00000417101 GABRQQ9UN88 632 aa26.65■■□□□ 1.86
ACTB-203ENST00000417101 MAST2Q6P0Q8 1798 aa26.65■■□□□ 1.86
ACTB-203ENST00000417101 FLT1P17948 1338 aa26.65■■□□□ 1.86
ACTB-203ENST00000417101 USP17L5A8MUK1 530 aa26.64■■□□□ 1.86
ACTB-203ENST00000417101 TBC1D2Q9BYX2 928 aa26.64■■□□□ 1.86
ACTB-203ENST00000417101 PNMA3Q9UL41 463 aa26.64■■□□□ 1.86
ACTB-203ENST00000417101 EXOC6BQ9Y2D4 811 aa26.64■■□□□ 1.86
ACTB-203ENST00000417101 IGSF3O75054 1194 aa26.63■■□□□ 1.85
ACTB-203ENST00000417101 IDH1O75874 414 aaKnown RBP26.63■■□□□ 1.85
ACTB-203ENST00000417101 CYP7A1P22680 504 aa26.63■■□□□ 1.85
ACTB-203ENST00000417101 HMGCS2P54868 508 aa26.63■■□□□ 1.85
ACTB-203ENST00000417101 ANKRD13CQ8N6S4 541 aa26.63■■□□□ 1.85
ACTB-203ENST00000417101 GCC1Q96CN9 775 aa26.63■■□□□ 1.85
ACTB-203ENST00000417101 PALD1Q9ULE6 856 aa26.63■■□□□ 1.85
ACTB-203ENST00000417101 TNPO2O14787 897 aaKnown RBP26.62■■□□□ 1.85
ACTB-203ENST00000417101 DYNLL1P63167 89 aaKnown RBP26.62■■□□□ 1.85
ACTB-203ENST00000417101 AS3MTQ9HBK9 375 aa26.62■■□□□ 1.85
ACTB-203ENST00000417101 SAP30BPQ9UHR5 308 aaKnown RBP26.62■■□□□ 1.85
ACTB-203ENST00000417101 NDUFB9Q9Y6M9 179 aa26.62■■□□□ 1.85
ACTB-203ENST00000417101 CCL5P13501 91 aa26.61■■□□□ 1.85
ACTB-203ENST00000417101 FLT3LGP49771 235 aa26.61■■□□□ 1.85
ACTB-203ENST00000417101 ERC1Q8IUD2 1116 aa26.61■■□□□ 1.85
ACTB-203ENST00000417101 FOXP4Q8IVH2 680 aaPredicted RBP26.61■■□□□ 1.85
ACTB-203ENST00000417101 CRACR2BQ8N4Y2 399 aaPredicted RBP26.61■■□□□ 1.85
ACTB-203ENST00000417101 SLAIN1Q8ND83 568 aa26.61■■□□□ 1.85
ACTB-203ENST00000417101 TRIM34Q9BYJ4 488 aa26.61■■□□□ 1.85
ACTB-203ENST00000417101 DNAJC18Q9H819 358 aa26.61■■□□□ 1.85
ACTB-203ENST00000417101 MYO5AQ9Y4I1 1855 aaKnown RBP26.6■■□□□ 1.85
ACTB-203ENST00000417101 UBXN2AP68543 259 aa26.6■■□□□ 1.85
ACTB-203ENST00000417101 AACSQ86V21 672 aa26.6■■□□□ 1.85
ACTB-203ENST00000417101 SHISA4Q96DD7 197 aa26.6■■□□□ 1.85
ACTB-203ENST00000417101 MGAMO43451 1857 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 ADCY3O60266 1144 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 ASNSP08243 561 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 JAG1P78504 1218 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 PABPC4Q13310 644 aaKnown RBP eCLIP26.59■■□□□ 1.85
ACTB-203ENST00000417101 SH3D19Q5HYK7 790 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 METTL16Q86W50 562 aaKnown RBP26.59■■□□□ 1.85
ACTB-203ENST00000417101 MIGA1Q8NAN2 632 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 WDR18Q9BV38 432 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 RNF208Q9H0X6 261 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 ANTXR1Q9H6X2 564 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 SIPA1L1O43166 1804 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 ATAD5Q96QE3 1844 aa26.59■■□□□ 1.85
ACTB-203ENST00000417101 GJB1P08034 283 aa26.58■■□□□ 1.85
ACTB-203ENST00000417101 ELNP15502 786 aa26.58■■□□□ 1.85
ACTB-203ENST00000417101 MTMR2Q13614 643 aa26.58■■□□□ 1.85
ACTB-203ENST00000417101 FAM110CQ1W6H9 321 aa26.58■■□□□ 1.85
ACTB-203ENST00000417101 MAGEB6Q8N7X4 407 aa26.58■■□□□ 1.85
ACTB-203ENST00000417101 NKX2-3Q8TAU0 364 aa26.58■■□□□ 1.85
ACTB-203ENST00000417101 ASCC2Q9H1I8 757 aaPredicted RBP26.58■■□□□ 1.85
ACTB-203ENST00000417101 IL1RAPL2Q9NP60 686 aa26.58■■□□□ 1.85
ACTB-203ENST00000417101 GDF11O95390 407 aa26.57■■□□□ 1.84
ACTB-203ENST00000417101 HLA-DOAP06340 250 aa26.57■■□□□ 1.84
ACTB-203ENST00000417101 MS4A1P11836 297 aa26.57■■□□□ 1.84
ACTB-203ENST00000417101 GCLCP48506 637 aaPredicted RBP26.57■■□□□ 1.84
ACTB-203ENST00000417101 SHROOM1Q2M3G4 852 aaPredicted RBP26.57■■□□□ 1.84
ACTB-203ENST00000417101 COA7Q96BR5 231 aa26.57■■□□□ 1.84
ACTB-203ENST00000417101 LOC285556D6RIA3 1793 aa26.56■■□□□ 1.84
ACTB-203ENST00000417101 GJA8P48165 433 aa26.56■■□□□ 1.84
ACTB-203ENST00000417101 BACE1P56817 501 aa26.56■■□□□ 1.84
ACTB-203ENST00000417101 HSP90AB4PQ58FF6 505 aa26.56■■□□□ 1.84
ACTB-203ENST00000417101 TAOK2Q9UL54 1235 aa26.56■■□□□ 1.84
ACTB-203ENST00000417101 CDK5RAP2Q96SN8 1893 aa26.55■■□□□ 1.84
ACTB-203ENST00000417101 MAP3K12Q12852 859 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms