RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 IDI2Q9BXS1 227 aa9.64□□□□□ -0.87
MDC1-203ENST00000417033 USP26Q9BXU7 913 aa9.64□□□□□ -0.87
MDC1-203ENST00000417033 TMEM39BQ9GZU3 492 aa9.64□□□□□ -0.87
MDC1-203ENST00000417033 OSBPL5Q9H0X9 879 aaPredicted RBP9.64□□□□□ -0.87
MDC1-203ENST00000417033 INCENPQ9NQS7 918 aa9.64□□□□□ -0.87
MDC1-203ENST00000417033 MCM9Q9NXL9 1143 aa9.64□□□□□ -0.87
MDC1-203ENST00000417033 SIPA1L1O43166 1804 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 SCN4AP35499 1836 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 FOCADQ5VW36 1801 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 IQCA1LA6NCM1 817 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 FAM196BA6NMK8 535 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 SLC27A2O14975 620 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 GALR2O43603 387 aaPredicted RBP9.63□□□□□ -0.87
MDC1-203ENST00000417033 REC8O95072 547 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 GNAT2P19087 354 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 PLCD1P51178 756 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 CTDSPL2Q05D32 466 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 FMR1Q06787 632 aaKnown RBP eCLIP9.63□□□□□ -0.87
MDC1-203ENST00000417033 RASA3Q14644 834 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 STOX1Q6ZVD7 989 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 USP50Q70EL3 339 aaPredicted RBP9.63□□□□□ -0.87
MDC1-203ENST00000417033 SLC44A5Q8NCS7 719 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 DYNLL2Q96FJ2 89 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 NAPBQ9H115 298 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 TMOD2Q9NZR1 351 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 PGAP2Q9UHJ9 254 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 SSC5DA1L4H1 1573 aa9.63□□□□□ -0.87
MDC1-203ENST00000417033 MINDY4BA8MYZ0 360 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 MYO1BO43795 1136 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 CYP21A2P08686 494 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
MDC1-203ENST00000417033 TIE1P35590 1138 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 NECTIN1Q15223 517 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 ALX1Q15699 326 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 MAP1SQ66K74 1059 aaPredicted RBP9.62□□□□□ -0.87
MDC1-203ENST00000417033 CREB3L3Q68CJ9 461 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 TEPSINQ96N21 525 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 GLIS2Q9BZE0 524 aaPredicted RBP9.62□□□□□ -0.87
MDC1-203ENST00000417033 DNAJC18Q9H819 358 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 ATP8A2Q9NTI2 1148 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 FZD1Q9UP38 647 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 ATRNL1Q5VV63 1379 aa9.62□□□□□ -0.87
MDC1-203ENST00000417033 ZMYM6O95789 1325 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 NEDD4P46934 1319 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 UTRNP46939 3433 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 LAMB1P07942 1786 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 TRAF5O00463 557 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 KIF3CO14782 793 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 ENTPD3O75355 529 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
MDC1-203ENST00000417033 HSPA4P34932 840 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 MMP14P50281 582 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 PPARAQ07869 468 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 SHROOM1Q2M3G4 852 aaPredicted RBP9.61□□□□□ -0.87
MDC1-203ENST00000417033 NBPF12Q5TAG4 269 aaPredicted RBP9.61□□□□□ -0.87
MDC1-203ENST00000417033 C12orf60Q5U649 245 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 USP48Q86UV5 1035 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 CERS3Q8IU89 383 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 ZSCAN29Q8IWY8 852 aaPredicted RBP9.61□□□□□ -0.87
MDC1-203ENST00000417033 FAM151AQ8WW52 585 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 NACAP1Q9BZK3 213 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 DEFB129Q9H1M3 183 aa9.61□□□□□ -0.87
MDC1-203ENST00000417033 MYH1P12882 1939 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 PRDM1O75626 825 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 YY1P25490 414 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 RRP1BQ14684 758 aaKnown RBP9.6□□□□□ -0.87
MDC1-203ENST00000417033 ADCK5Q3MIX3 580 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 SBK1Q52WX2 424 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 FKBP1CQ5VVH2 108 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 KRT26Q7Z3Y9 468 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 FAM83AQ86UY5 434 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 APOBEC3FQ8IUX4 373 aaKnown RBP9.6□□□□□ -0.87
MDC1-203ENST00000417033 DCPSQ96C86 337 aaKnown RBP9.6□□□□□ -0.87
MDC1-203ENST00000417033 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
MDC1-203ENST00000417033 ARPP21Q9UBL0 812 aaPredicted RBP9.6□□□□□ -0.87
MDC1-203ENST00000417033 TRPC6Q9Y210 931 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 SNX14Q9Y5W7 946 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 POLR2AP24928 1970 aaKnown RBP9.6□□□□□ -0.87
MDC1-203ENST00000417033 LAMA4Q16363 1823 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 ROBO3Q96MS0 1386 aa9.6□□□□□ -0.87
MDC1-203ENST00000417033 COL2A1P02458 1487 aaPredicted RBP9.59□□□□□ -0.87
MDC1-203ENST00000417033 PITPNM2Q9BZ72 1349 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 CPA1P15085 419 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 GABPAQ06546 454 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 MIGA2Q7L4E1 593 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 PNMA8AQ86V59 439 aaPredicted RBP9.59□□□□□ -0.87
MDC1-203ENST00000417033 LDHDQ86WU2 507 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 SULF1Q8IWU6 871 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 ZNF784Q8NCA9 323 aaPredicted RBP9.59□□□□□ -0.87
MDC1-203ENST00000417033 KCNB2Q92953 911 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 CDCA5Q96FF9 252 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 DDRGK1Q96HY6 314 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 KIF2CQ99661 725 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 TMEM106CQ9BVX2 250 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 C22orf23Q9BZE7 217 aa9.59□□□□□ -0.87
MDC1-203ENST00000417033 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
MDC1-203ENST00000417033 E7EWF7 191 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms