RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 RC3H1Q5TC82 1133 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 C1orf53Q5VUE5 145 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 DIEXFQ68CQ4 756 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 FAAH2Q6GMR7 532 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 SWSAP1Q6NVH7 229 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 CPLX2Q6PUV4 134 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ADGRD1Q6QNK2 874 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 C4orf50Q6ZRC1 276 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 BRINP3Q76B58 766 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 EEPD1Q7L9B9 569 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 PODNQ7Z5L7 613 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ATCAYQ86WG3 371 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 SNX32Q86XE0 403 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 SPATS2Q86XZ4 545 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 EGFL6Q8IUX8 553 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 STAG2Q8N3U4 1231 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 NKAPQ8N5F7 415 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 IL17REQ8NFR9 667 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 EDEM1Q92611 657 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 SMARCC1Q92922 1105 aaPredicted RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 TIFAQ96CG3 184 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 TBC1D31Q96DN5 1066 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 THAP11Q96EK4 314 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 CD248Q9HCU0 757 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 INTS7Q9NVH2 962 aaKnown RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ZNF358Q9NW07 568 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ARHGAP28Q9P2N2 729 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 FAM198AQ9UFP1 575 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 IP6K2Q9UHH9 426 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 PNMA8BQ9ULN7 279 aaPredicted RBP3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 PHTF1Q9UMS5 762 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 CEP131Q9UPN4 1083 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ANKRD6Q9Y2G4 727 aa3.7□□□□□ -1.82
CTDSPL-203ENST00000416688 ROBO2Q9HCK4 1378 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 ABHD14A-ACY1A0A1B0GW23 586 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 A6NCN8 305 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 TRIM64CA6NLI5 447 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 POTECB2RU33 542 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 CHL1O00533 1208 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 APAF1O14727 1248 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 PLD2O14939 933 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 GPR39O43194 453 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 PPP1R12BO60237 982 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 TNFRSF21O75509 655 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 BAIAP3O94812 1187 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 MICAL2O94851 1124 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 FBXO21O94952 628 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SNUPNO95149 360 aaKnown RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 NPTXRO95502 500 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 CNOT4O95628 575 aaKnown RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SLC10A3P09131 477 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 CCND1P24385 295 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SERPINB3P29508 390 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 KIF5BP33176 963 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 CYP2C19P33261 490 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 MAPK9P45984 424 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SNX16P57768 344 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 KRT83P78385 493 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 APBA1Q02410 837 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 STRN3Q13033 797 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SEPT6Q14141 434 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 GRIN2CQ14957 1233 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 PSMD6Q15008 389 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 CCDC85BQ15834 202 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 PTPRNQ16849 979 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 ARHGAP29Q52LW3 1261 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 PPP4R3BQ5MIZ7 849 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 GPR158Q5T848 1215 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SYDE2Q5VT97 1194 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 KIAA0319Q5VV43 1072 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 FBXW10Q5XX13 1052 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 ISM2Q6H9L7 571 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 CNNM4Q6P4Q7 775 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 C16orf54Q6UWD8 224 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SPATC1Q76KD6 591 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SRLQ86TD4 932 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SAPCD2Q86UD0 394 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 PNMA8AQ86V59 439 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 TEX9Q8N6V9 391 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 ARL10Q8N8L6 244 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 JARID2Q92833 1246 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 CCDC74AQ96AQ1 378 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 CLIP3Q96DZ5 547 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 VMP1Q96GC9 406 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 MYO19Q96H55 970 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 IPO9Q96P70 1041 aaKnown RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 FERD3LQ96RJ6 166 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 NUDT16L1Q9BRJ7 211 aaKnown RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 KCNQ5Q9NR82 932 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 TBC1D22BQ9NU19 505 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 ARGLU1Q9NWB6 273 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SCHIP1Q9P0W5 487 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 MAP10Q9P2G4 905 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 EPS15L1Q9UBC2 864 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SEL1LQ9UBV2 794 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 FBXO10Q9UK96 956 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 FAM50BQ9Y247 325 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 MAP4K5Q9Y4K4 846 aa3.69□□□□□ -1.82
CTDSPL-203ENST00000416688 SNX5Q9Y5X3 404 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms