RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 RIOK1Q9BRS2 568 aaKnown RBP13.32□□□□□ -0.28
A1CF-208ENST00000414883 DNAJC18Q9H819 358 aa13.32□□□□□ -0.28
A1CF-208ENST00000414883 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.32□□□□□ -0.28
A1CF-208ENST00000414883 BTBD19C9JJ37 291 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 BAG3O95817 575 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 PDE6AP16499 860 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 PTPRAP18433 802 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 DGKZQ13574 1117 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 MAPKAPK5Q8IW41 473 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 MIGA1Q8NAN2 632 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 TGFBRAP1Q8WUH2 860 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 HAUS7Q99871 368 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 ZSWIM8A7E2V4 1837 aa13.31□□□□□ -0.28
A1CF-208ENST00000414883 NAV1Q8NEY1 1877 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 GOLIM4O00461 696 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 CHGBP05060 677 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 CETPP11597 493 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 PLCG2P16885 1265 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 JAG1P78504 1218 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 MAP3K12Q12852 859 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 SNAPC2Q13487 334 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 SLFNL1Q499Z3 407 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
A1CF-208ENST00000414883 SCYL3Q8IZE3 742 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 AFG3L2Q9Y4W6 797 aa13.3□□□□□ -0.28
A1CF-208ENST00000414883 CTNND1O60716 968 aaKnown RBP13.29□□□□□ -0.28
A1CF-208ENST00000414883 FKTNO75072 461 aa13.29□□□□□ -0.28
A1CF-208ENST00000414883 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
A1CF-208ENST00000414883 TTF1Q15361 905 aaPredicted RBP13.29□□□□□ -0.28
A1CF-208ENST00000414883 GPAT2Q6NUI2 795 aa13.29□□□□□ -0.28
A1CF-208ENST00000414883 CTU1Q7Z7A3 348 aaKnown RBP13.29□□□□□ -0.28
A1CF-208ENST00000414883 CCDC84Q86UT8 332 aaPredicted RBP13.29□□□□□ -0.28
A1CF-208ENST00000414883 DNAJC2Q99543 621 aaKnown RBP13.29□□□□□ -0.28
A1CF-208ENST00000414883 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
A1CF-208ENST00000414883 PALD1Q9ULE6 856 aa13.29□□□□□ -0.28
A1CF-208ENST00000414883 LOC285556D6RIA3 1793 aa13.29□□□□□ -0.28
A1CF-208ENST00000414883 BAZ2AQ9UIF9 1905 aaKnown RBP13.29□□□□□ -0.28
A1CF-208ENST00000414883 CXCL11O14625 94 aa13.28□□□□□ -0.28
A1CF-208ENST00000414883 SHROOM1Q2M3G4 852 aaPredicted RBP13.28□□□□□ -0.28
A1CF-208ENST00000414883 SLC9C2Q5TAH2 1124 aa13.28□□□□□ -0.28
A1CF-208ENST00000414883 OTUD7BQ6GQQ9 843 aa13.28□□□□□ -0.28
A1CF-208ENST00000414883 NOL10Q9BSC4 688 aaKnown RBP13.28□□□□□ -0.28
A1CF-208ENST00000414883 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
A1CF-208ENST00000414883 DHX36Q9H2U1 1008 aaKnown RBP13.28□□□□□ -0.28
A1CF-208ENST00000414883 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.28□□□□□ -0.28
A1CF-208ENST00000414883 ZCCHC17Q9NP64 241 aaKnown RBP13.28□□□□□ -0.28
A1CF-208ENST00000414883 PI4KBQ9UBF8 816 aa13.28□□□□□ -0.28
A1CF-208ENST00000414883 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
A1CF-208ENST00000414883 ZHX2Q9Y6X8 837 aa13.28□□□□□ -0.28
A1CF-208ENST00000414883 ADGRA2Q96PE1 1338 aa13.28□□□□□ -0.28
A1CF-208ENST00000414883 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
A1CF-208ENST00000414883 A0A0G2JLL6 359 aaPredicted RBP13.27□□□□□ -0.29
A1CF-208ENST00000414883 ADD2P35612 726 aa13.27□□□□□ -0.29
A1CF-208ENST00000414883 CAP2P40123 477 aa13.27□□□□□ -0.29
A1CF-208ENST00000414883 EVX2Q03828 476 aa13.27□□□□□ -0.29
A1CF-208ENST00000414883 TSHZ3Q63HK5 1081 aa13.27□□□□□ -0.29
A1CF-208ENST00000414883 PRRT2Q7Z6L0 340 aaPredicted RBP13.27□□□□□ -0.29
A1CF-208ENST00000414883 OTUD7AQ8TE49 926 aaPredicted RBP13.27□□□□□ -0.29
A1CF-208ENST00000414883 SAP30BPQ9UHR5 308 aaKnown RBP13.27□□□□□ -0.29
A1CF-208ENST00000414883 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
A1CF-208ENST00000414883 HDAC1Q13547 482 aaPredicted RBP13.26□□□□□ -0.29
A1CF-208ENST00000414883 TAF1CQ15572 869 aaPredicted RBP13.26□□□□□ -0.29
A1CF-208ENST00000414883 ANKRD23Q86SG2 305 aa13.26□□□□□ -0.29
A1CF-208ENST00000414883 CERS3Q8IU89 383 aa13.26□□□□□ -0.29
A1CF-208ENST00000414883 LCORLQ8N3X6 602 aa13.26□□□□□ -0.29
A1CF-208ENST00000414883 PICK1Q9NRD5 415 aa13.26□□□□□ -0.29
A1CF-208ENST00000414883 ECHDC1Q9NTX5 307 aa13.26□□□□□ -0.29
A1CF-208ENST00000414883 MAGEB6P1A0A0J9YX57 407 aa13.25□□□□□ -0.29
A1CF-208ENST00000414883 TLR2O60603 784 aa13.25□□□□□ -0.29
A1CF-208ENST00000414883 OTOP1Q7RTM1 612 aa13.25□□□□□ -0.29
A1CF-208ENST00000414883 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
A1CF-208ENST00000414883 CD99L2Q8TCZ2 262 aa13.25□□□□□ -0.29
A1CF-208ENST00000414883 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
A1CF-208ENST00000414883 MGAMO43451 1857 aa13.25□□□□□ -0.29
A1CF-208ENST00000414883 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
A1CF-208ENST00000414883 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 PDHXO00330 501 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 PLCD1P51178 756 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 SP3Q02447 781 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 GABPAQ06546 454 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 PKN2Q16513 984 aaKnown RBP13.24□□□□□ -0.29
A1CF-208ENST00000414883 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 TATDN1Q6P1N9 297 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 C17orf99Q6UX52 265 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 PI4K2BQ8TCG2 481 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 EHD4Q9H223 541 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 ZFYVE28Q9HCC9 887 aa13.24□□□□□ -0.29
A1CF-208ENST00000414883 TRIM75PA6NK02 468 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 PRKAB2O43741 272 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 CTGFP29279 349 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 USP5P45974 858 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 UBE3CQ15386 1083 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 SDR42E1Q8WUS8 393 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 ARHGAP39Q9C0H5 1083 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 ARMT1Q9H993 441 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 DCP1AQ9NPI6 582 aaPredicted RBP13.23□□□□□ -0.29
A1CF-208ENST00000414883 HPS5Q9UPZ3 1129 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 MYH8P13535 1937 aa13.23□□□□□ -0.29
A1CF-208ENST00000414883 CCDC85CA6NKD9 419 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms