RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 MFSD6Q6ZSS7 791 aa18.34■□□□□ 0.53
SHMT2-202ENST00000414700 MB21D2Q8IYB1 491 aaPredicted RBP18.34■□□□□ 0.53
SHMT2-202ENST00000414700 SLC44A5Q8NCS7 719 aa18.34■□□□□ 0.53
SHMT2-202ENST00000414700 ZMYND15Q9H091 742 aa18.34■□□□□ 0.53
SHMT2-202ENST00000414700 ZNF70Q9UC06 446 aaPredicted RBP18.34■□□□□ 0.53
SHMT2-202ENST00000414700 TCP10L2B9ZVM9 353 aa18.33■□□□□ 0.53
SHMT2-202ENST00000414700 ST18O60284 1047 aa18.33■□□□□ 0.53
SHMT2-202ENST00000414700 AK2P54819 239 aa18.33■□□□□ 0.53
SHMT2-202ENST00000414700 RRP12Q5JTH9 1297 aaKnown RBP18.33■□□□□ 0.53
SHMT2-202ENST00000414700 NCOA7Q8NI08 942 aa18.33■□□□□ 0.53
SHMT2-202ENST00000414700 SIPA1L1O43166 1804 aa18.33■□□□□ 0.52
SHMT2-202ENST00000414700 XRCC6P12956 609 aaKnown RBP eCLIP18.33■□□□□ 0.52
SHMT2-202ENST00000414700 ANTXR2P58335 489 aa18.33■□□□□ 0.52
SHMT2-202ENST00000414700 SPDYE2Q495Y8 402 aa18.33■□□□□ 0.52
SHMT2-202ENST00000414700 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.52
SHMT2-202ENST00000414700 SH3BP5LQ7L8J4 393 aa18.33■□□□□ 0.52
SHMT2-202ENST00000414700 SNX21Q969T3 373 aa18.33■□□□□ 0.52
SHMT2-202ENST00000414700 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
SHMT2-202ENST00000414700 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
SHMT2-202ENST00000414700 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
SHMT2-202ENST00000414700 EXOSC10Q01780 885 aaKnown RBP18.32■□□□□ 0.52
SHMT2-202ENST00000414700 DHX32Q7L7V1 743 aaKnown RBP18.32■□□□□ 0.52
SHMT2-202ENST00000414700 RALYLQ86SE5 291 aaKnown RBP18.32■□□□□ 0.52
SHMT2-202ENST00000414700 TRPM4Q8TD43 1214 aa18.32■□□□□ 0.52
SHMT2-202ENST00000414700 SLKQ9H2G2 1235 aaPredicted RBP18.32■□□□□ 0.52
SHMT2-202ENST00000414700 VEZTQ9HBM0 779 aa18.32■□□□□ 0.52
SHMT2-202ENST00000414700 GPHNQ9NQX3 736 aaPredicted RBP18.32■□□□□ 0.52
SHMT2-202ENST00000414700 KDM4AO75164 1064 aa18.32■□□□□ 0.52
SHMT2-202ENST00000414700 TRDNQ13061 729 aa18.32■□□□□ 0.52
SHMT2-202ENST00000414700 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
SHMT2-202ENST00000414700 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHMT2-202ENST00000414700 FGRP09769 529 aa18.31■□□□□ 0.52
SHMT2-202ENST00000414700 TOB2Q14106 344 aaPredicted RBP18.31■□□□□ 0.52
SHMT2-202ENST00000414700 ZSWIM5Q9P217 1185 aa18.31■□□□□ 0.52
SHMT2-202ENST00000414700 ROBO3Q96MS0 1386 aa18.31■□□□□ 0.52
SHMT2-202ENST00000414700 H7C1D1 291 aa18.3■□□□□ 0.52
SHMT2-202ENST00000414700 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
SHMT2-202ENST00000414700 CNTNAP1P78357 1384 aa18.3■□□□□ 0.52
SHMT2-202ENST00000414700 Q6ZUG5 572 aa18.3■□□□□ 0.52
SHMT2-202ENST00000414700 HSCBQ8IWL3 235 aa18.3■□□□□ 0.52
SHMT2-202ENST00000414700 CDAN1Q8IWY9 1227 aa18.3■□□□□ 0.52
SHMT2-202ENST00000414700 AMOTL1Q8IY63 956 aa18.3■□□□□ 0.52
SHMT2-202ENST00000414700 POLR2AP24928 1970 aaKnown RBP18.3■□□□□ 0.52
SHMT2-202ENST00000414700 PRC1O43663 620 aa18.3■□□□□ 0.52
SHMT2-202ENST00000414700 HIRAP54198 1017 aaPredicted RBP18.3■□□□□ 0.52
SHMT2-202ENST00000414700 RNF41Q9H4P4 317 aaPredicted RBP18.3■□□□□ 0.52
SHMT2-202ENST00000414700 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
SHMT2-202ENST00000414700 MYH8P13535 1937 aa18.29■□□□□ 0.52
SHMT2-202ENST00000414700 MYO1BO43795 1136 aa18.29■□□□□ 0.52
SHMT2-202ENST00000414700 MCM5P33992 734 aa18.29■□□□□ 0.52
SHMT2-202ENST00000414700 ZSCAN29Q8IWY8 852 aaPredicted RBP18.29■□□□□ 0.52
SHMT2-202ENST00000414700 ZKSCAN3Q9BRR0 538 aa18.29■□□□□ 0.52
SHMT2-202ENST00000414700 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
SHMT2-202ENST00000414700 FAM196BA6NMK8 535 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 K7ELQ4 463 aaPredicted RBP18.28■□□□□ 0.52
SHMT2-202ENST00000414700 RANBP6O60518 1105 aaKnown RBP18.28■□□□□ 0.52
SHMT2-202ENST00000414700 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
SHMT2-202ENST00000414700 MMP14P50281 582 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 KRT23Q9C075 422 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 ENTPD3O75355 529 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 LARGE1O95461 756 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 CDK8P49336 464 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 GABPAQ06546 454 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 PDE4BQ07343 736 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 FAM47AQ5JRC9 791 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 DPY19L2Q6NUT2 758 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 C16orf86Q6ZW13 317 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 BRF1Q92994 677 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 TMEM39BQ9GZU3 492 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 DNAJC18Q9H819 358 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 SENP2Q9HC62 589 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 HACL1Q9UJ83 578 aa18.28■□□□□ 0.52
SHMT2-202ENST00000414700 ORC4O43929 436 aa18.27■□□□□ 0.52
SHMT2-202ENST00000414700 SLC3A2P08195 630 aaKnown RBP18.27■□□□□ 0.52
SHMT2-202ENST00000414700 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
SHMT2-202ENST00000414700 TPCN1Q9ULQ1 816 aa18.27■□□□□ 0.52
SHMT2-202ENST00000414700 ATRNL1Q5VV63 1379 aa18.27■□□□□ 0.52
SHMT2-202ENST00000414700 GLTPD2A6NH11 291 aa18.27■□□□□ 0.51
SHMT2-202ENST00000414700 TMX3Q96JJ7 454 aa18.27■□□□□ 0.51
SHMT2-202ENST00000414700 NMT2O60551 498 aa18.26■□□□□ 0.51
SHMT2-202ENST00000414700 RASA1P20936 1047 aa18.26■□□□□ 0.51
SHMT2-202ENST00000414700 FAM151AQ8WW52 585 aa18.26■□□□□ 0.51
SHMT2-202ENST00000414700 ESR2Q92731 530 aa18.26■□□□□ 0.51
SHMT2-202ENST00000414700 CSRNP1Q96S65 589 aa18.26■□□□□ 0.51
SHMT2-202ENST00000414700 AGXT2Q9BYV1 514 aa18.26■□□□□ 0.51
SHMT2-202ENST00000414700 DHX36Q9H2U1 1008 aaKnown RBP18.26■□□□□ 0.51
SHMT2-202ENST00000414700 MKNK2Q9HBH9 465 aa18.26■□□□□ 0.51
SHMT2-202ENST00000414700 ZC3H4Q9UPT8 1303 aaKnown RBP18.25■□□□□ 0.51
SHMT2-202ENST00000414700 PCP11498 1178 aaKnown RBP18.25■□□□□ 0.51
SHMT2-202ENST00000414700 LMOD1P29536 600 aaPredicted RBP18.25■□□□□ 0.51
SHMT2-202ENST00000414700 FGD1P98174 961 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 APOBRQ0VD83 1088 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 ME3Q16798 604 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 ANGEL2Q5VTE6 544 aaKnown RBP18.25■□□□□ 0.51
SHMT2-202ENST00000414700 FKBP1CQ5VVH2 108 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 IGDCC4Q8TDY8 1250 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 L3MBTL3Q96JM7 780 aaPredicted RBP18.25■□□□□ 0.51
SHMT2-202ENST00000414700 ALDH8A1Q9H2A2 487 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms