RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 KIF16BQ96L93 1317 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 H7C1W4 665 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
LINC00343-201ENST00000414368 TRIM27P14373 513 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 KCNA3P22001 575 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 SCTRP47872 440 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 CLDN10P78369 228 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 PTK7Q13308 1070 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 SLC10A5Q5PT55 438 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 ATF7IPQ6VMQ6 1270 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 C2CD5Q86YS7 1000 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 ANKMY2Q8IV38 441 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 ZBTB38Q8NAP3 1195 aaPredicted RBP8.63□□□□□ -1.03
LINC00343-201ENST00000414368 ARHGAP45Q92619 1136 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 KLF16Q9BXK1 252 aaPredicted RBP8.63□□□□□ -1.03
LINC00343-201ENST00000414368 API5Q9BZZ5 524 aaKnown RBP8.63□□□□□ -1.03
LINC00343-201ENST00000414368 SRCIN1Q9C0H9 1055 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 PXDNLA1KZ92 1463 aa8.63□□□□□ -1.03
LINC00343-201ENST00000414368 IBTKQ9P2D0 1353 aaPredicted RBP8.62□□□□□ -1.03
LINC00343-201ENST00000414368 BRCA1P38398 1863 aaKnown RBP8.62□□□□□ -1.03
LINC00343-201ENST00000414368 PHF20L1A8MW92 1017 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 H0YIN7 160 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 IRS4O14654 1257 aaPredicted RBP8.62□□□□□ -1.03
LINC00343-201ENST00000414368 PCCAP05165 728 aaPredicted RBP8.62□□□□□ -1.03
LINC00343-201ENST00000414368 RLBP1P12271 317 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 BMP2P12643 396 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 PDE6BP35913 854 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 TGFB2P61812 414 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 DPYDQ12882 1025 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 TPCN2Q8NHX9 752 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 ZNF622Q969S3 477 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC00343-201ENST00000414368 TRAIPQ9BWF2 469 aa8.62□□□□□ -1.03
LINC00343-201ENST00000414368 MYH3P11055 1940 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 ALDH1L1O75891 902 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 NBPF7P0C2Y1 421 aaPredicted RBP8.61□□□□□ -1.03
LINC00343-201ENST00000414368 SRGNP10124 158 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 CASP7P55210 303 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 MAP3K10Q02779 954 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 CYP2U1Q7Z449 544 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 PANK1Q8TE04 598 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 STK32AQ8WU08 396 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 NLRP3Q96P20 1036 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 USP44Q9H0E7 712 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 C9orf78Q9NZ63 289 aaPredicted RBP8.61□□□□□ -1.03
LINC00343-201ENST00000414368 DNMT3LQ9UJW3 386 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 ZMIZ1Q9ULJ6 1067 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 PCDHGA11Q9Y5H2 935 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 DLEC1Q9Y238 1755 aa8.61□□□□□ -1.03
LINC00343-201ENST00000414368 ABCC4O15439 1325 aa8.6□□□□□ -1.03
LINC00343-201ENST00000414368 SLX4Q8IY92 1834 aa8.6□□□□□ -1.03
LINC00343-201ENST00000414368 KLRG2A4D1S0 409 aaPredicted RBP8.6□□□□□ -1.03
LINC00343-201ENST00000414368 GRM8O00222 908 aa8.6□□□□□ -1.03
LINC00343-201ENST00000414368 UPP2O95045 317 aa8.6□□□□□ -1.03
LINC00343-201ENST00000414368 CCT4P50991 539 aaKnown RBP8.6□□□□□ -1.03
LINC00343-201ENST00000414368 C20orf194Q5TEA3 1177 aa8.6□□□□□ -1.03
LINC00343-201ENST00000414368 TMEM164Q5U3C3 297 aa8.6□□□□□ -1.03
LINC00343-201ENST00000414368 INTS3Q68E01 1043 aaKnown RBP8.6□□□□□ -1.03
LINC00343-201ENST00000414368 DZIP1LQ8IYY4 767 aaKnown RBP8.6□□□□□ -1.03
LINC00343-201ENST00000414368 SIX5Q8N196 739 aa8.6□□□□□ -1.03
LINC00343-201ENST00000414368 TMEM57Q8N5G2 664 aa8.6□□□□□ -1.03
LINC00343-201ENST00000414368 COL4A1P02462 1669 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 RNF123Q5XPI4 1314 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 CDHR2Q9BYE9 1310 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 PDE8AO60658 829 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 ZIC2O95409 532 aaPredicted RBP8.59□□□□□ -1.03
LINC00343-201ENST00000414368 YBX3P16989 372 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC00343-201ENST00000414368 SEC13P55735 322 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 CRY2Q49AN0 593 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 EPHA10Q5JZY3 1008 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 LYPD4Q6UWN0 246 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 SLC51AQ86UW1 340 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 FTSJ3Q8IY81 847 aaKnown RBP8.59□□□□□ -1.03
LINC00343-201ENST00000414368 RPGRQ92834 1020 aaKnown RBP8.59□□□□□ -1.03
LINC00343-201ENST00000414368 MASTLQ96GX5 879 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 KAZALD1Q96I82 304 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 OSBPL3Q9H4L5 887 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 KIAA1024Q9UPX6 916 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 BCS1LQ9Y276 419 aa8.59□□□□□ -1.03
LINC00343-201ENST00000414368 RIC1Q4ADV7 1423 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 ZBTB7BO15156 539 aaPredicted RBP8.58□□□□□ -1.04
LINC00343-201ENST00000414368 LILRA1O75019 489 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 NPR1P16066 1061 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 HOXA10P31260 410 aaPredicted RBP8.58□□□□□ -1.04
LINC00343-201ENST00000414368 FOXO4P98177 505 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 SF3B3Q15393 1217 aaKnown RBP8.58□□□□□ -1.04
LINC00343-201ENST00000414368 DALRD3Q5D0E6 543 aaKnown RBP8.58□□□□□ -1.04
LINC00343-201ENST00000414368 STYK1Q6J9G0 422 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 OLFM4Q6UX06 510 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 ITPRIPQ8IWB1 547 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 TTLL6Q8N841 843 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 TTLL11Q8NHH1 800 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 SUCLG2Q96I99 432 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 MEIS3Q99687 375 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 ZFAND3Q9H8U3 227 aa8.58□□□□□ -1.04
LINC00343-201ENST00000414368 SEC31BQ9NQW1 1179 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms